Shewanella sedimentimangrovi: JYB85_18260
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Entry
JYB85_18260 CDS
T07846
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
JYB85_18260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
HHH_6
Motif
Other DBs
NCBI-ProteinID:
QSX37161
LinkDB
All DBs
Position
complement(4086297..4088645)
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AA seq
782 aa
AA seq
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MSDIARIIADELSVREQQVNATIALLDEGATVPFIARYRKEVTGGLDDTQLRNLFSRLGY
LRELADRRQVILSSIEAQGKLTPELKAAINAADNKTRLEDLYLPYKPKRRTKGQIAIEAG
LEPLADKLLAARGDVAVDPEAEAAAFIQAEAGFADARAVLDGARYILMERFAEDAELLRK
VREQLEHSAVIESRVMTGKEKEGAKFRDYFEHSEPMAKVPSHRALAMLRGRNEGILSLSM
NADPGAEPGSGSYCEVIIADHLGLKLGSCAVDMWLKSVVTATWRIKISLQMETEFVSRMR
EVAELDAIKVFARNLGDLLMAAPAGSKATLGLDPGLRTGVKVAVVNDTGKLVAHTTVFPH
EPQNQWDKSLRTLANLVTMYKVELIAVGNGTASRETDKLAGELIASLRDTHPGLTKVMVS
EAGASVYSASELAANEFPDLDVSIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQ
SLLSHSLEAVVEDCVNSVGVDLNMASVPLLSQVSGLNKTLAKNLVDYRDEHGQFKNRKEL
LKVPRLGPKAFEQAAGFLRIRDGDNPLDASAVHPETYSLVQRIAAAKSLAIDSLIGNTEL
IRGINPKDFVTEEFGLPTITDILRELDKPGRDPRGEFKTAQFKDGVHEIRDLKPEMILEG
VVTNVTNFGAFVDIGVHQDGLVHISSLADKFVSDPHTVVKAGDVVKVKVMEVDVERKRIG
LTMRLDEKPEVKSAKPQQHKGGQPNPRGGQPKGGQRQGSKPQPANAAMGNAFADAFAKLK
KS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatatagcgcggattattgccgacgaactgagtgttcgcgagcaacaggtcaat
gccaccatagccctgctggatgaaggcgccacagtgccctttatcgcccgttaccgtaaa
gaagtgaccggtggcctggatgacacccagttgcgtaacctgttcagtcgcctgggctat
ttgcgtgagctggccgatcgccgccaggtgatcctgtcctccattgaggcccagggcaag
ttgacccctgaacttaaggccgccatcaatgccgccgacaacaagacccgtcttgaagat
ctgtatctgccctacaagcccaagcgtcgcaccaagggccagattgccattgaagccggt
cttgaacctctggccgataaactgctggccgcccggggcgacgtcgctgtcgatcccgaa
gccgaagccgccgcctttatccaggccgaggccggatttgccgatgcccgcgccgtgctt
gatggtgcccgttatatcctgatggagcgttttgccgaagatgccgaactgctgcgcaag
gtgcgtgagcagctggaacacagcgcggtgatcgagagccgggtgatgacgggcaaggaa
aaggaaggtgccaagttccgagattattttgagcacagcgagcccatggccaaggtaccg
tcacacagggcgctggccatgctgcggggccgcaacgagggcatactcagcctgtcgatg
aatgccgatcccggagccgagcccggcagcggcagttattgcgaagtcattattgccgat
catcttgggcttaaacttggcagctgcgccgtggatatgtggctcaagtctgtggtgacc
gccacctggcgcatcaagatttcgctgcaaatggaaaccgaatttgtatcgcggatgcgc
gaagtggctgagttggatgccatcaaggtattcgcccgcaacctcggcgatctgctgatg
gcggcgcctgcaggttccaaggccaccctggggctggatcccgggctgcgcaccggggtt
aaggtggccgtggtcaacgacacaggcaaactggtggcccacaccacagtgttcccccat
gagccccaaaaccagtgggacaagtcgctgcgcacattggcgaacctggtgaccatgtac
aaggtggaactgattgccgtgggtaacggcaccgcctcccgtgaaaccgataagctggcg
ggcgagcttatcgccagcctgcgcgacacccatccgggcctgaccaaggtcatggtcagc
gaggccggtgcgtccgtgtattcggcctctgagctggcggccaatgaattcccggatctc
gacgtgtccattcgcggtgccgtgtccatcgcccggcgcctgcaggatcctctggccgag
ttggtgaagattgagcccaagtccatcggcgtgggtcagtatcagcacgatgtcagtcag
agtctgctgtcgcactccctggaagcggtggtggaagattgtgtaaacagcgtcggcgtc
gatctcaacatggcctcggtgccactgctcagtcaggtgtccggtctcaacaagaccctg
gccaagaatctggtggattaccgtgatgagcacggtcagtttaaaaaccgcaaggaattg
ctcaaggtgccgcgccttggccccaaggcctttgaacaggccgccggcttcctgcggatc
cgggatggggataacccactcgatgcctcggcggtacaccccgagacctattccctggtg
cagcgcattgccgccgccaagtccctggccatcgacagcctgataggtaacaccgagctt
atccgtggcatcaatcccaaggattttgttaccgaggaattcggtttgccgaccatcacc
gacattttgcgggagttggataagccgggtcgcgatccccggggtgagttcaagaccgcc
cagttcaaggacggggtccatgaaatccgcgatcttaagcctgagatgatccttgaaggc
gtggtcaccaatgtcaccaacttcggcgcctttgtggacataggtgtgcaccaggatggt
ctggtgcatatttcgtccctggcggacaagtttgtcagcgatccccacacagtggtcaag
gccggtgacgtggtcaaggtcaaggtgatggaagtggatgtggagcgcaagcgtatcggc
ctgaccatgcgcctcgacgagaagcccgaggtcaagagcgccaagccacaacagcacaag
ggggggcagcccaacccgcgtggtggccagccaaaaggcggtcaacgccagggcagcaag
ccgcaaccggccaacgccgccatgggcaatgcctttgccgatgccttcgccaagctgaaa
aagtcctga
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