Shewanella sedimentimangrovi: JYB85_18410
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Entry
JYB85_18410 CDS
T07846
Name
(GenBank) NPCBM/NEW2 domain-containing protein
Organism
ssem
Shewanella sedimentimangrovi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_31_2nd
NPCBM
Glyco_hydro_31_3rd
Gal_mutarotas_2
DUF5110
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
QSX37190
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All DBs
Position
complement(4115193..4118525)
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AA seq
1110 aa
AA seq
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MPKPFPLFALRCHPTALALAAIMYCGQGLAAPVGALTGVEPGVSQLTLTTDNRTKLQIDV
LKPSLLRIQAGAGGELSDEGSKAAAIVVKRDYQPVAFELSDQGQYQLLTTSALALRIYKQ
PLRFALYRADNRTLITEEVQSLELNQDSTVQTLSADADEFFYGGGQQNGAFEFRGKSLEI
SYSGGWEEGDRPSPAPFFMSSKGYGILRNTWSDGSYDFRGADYLRLAHQEGRFDAYIFAP
GSIQQVLADYTELTGRARLIPRWAFEYGDADCYNDGDNIKKPGTVPEGWSDGPTGTTPDV
IASVAKKYREHDMPGGWILPNDGYGCGYTDLPEVVSGLAQYGFHTGLWTENGVDKIAWEV
GSAGSRAQKLDVAWTGQGYQFALDANQAAAEGILNNSDSRPFLWTVMGWAGIQRYAVTWT
GDQSASWDYIRWHIPTLIGSGLSGQAYATGDVDAIFGGSPETFTRDLQWKSFTPVLMGMS
GWSKAARKHPWWYDEPYRSINRDYLKLKMRLMPYMYTTAWETEQTGAPIVRGLMWDHATG
AETLTEAHKYQFLVGKDLLVAPVFRSQVASKGWREDVFLPKGQWIDYWDGRVVEAPDEGL
SLDYQVDLKTLPLFVRGGAILPMYPESLYDGEKPKDVLTLDIYPWGESEYQMYEDDGSSR
RYRVGEFSQQRFAVKAPEGVAGDIEVHIEAAQGSFQGQESQRAYELMIHSRVKPEAVTLD
GAKLKLFKDAKALAKARSGWTYSEEKYGTVLVKTDRVSIRDNLVLQLAIDAAATLATTAG
YPAAPELGNELAADSLLVLGRPAEESGHPLENAFDGNPDTWFRTKRDQSQKTGAHEFTLA
LGERRLIAGFEIAPRNDKHWEYGQVADYEVYLGDNNGEWGEPVAKGRLAKSQQLQKVEFP
AKPGSLLRFRVLSTQDQAEADPMVTAAKDTAKAYNALLPKQVSPITISEFRVLQQSEPKT
ARTQLFLAEQSPLRSDNALGPVELNLANGGRKSGDGAQMSMNGLKFSKGLGVSHSSRIDY
RLSGQWQLLRADLGIDDSCRSKGGMQFQIWGDDRLLYDSGLVQAPAVVKPELDIRGVSLL
SLRTTGGSPGVCGNWANASVLGFPAVPGQL
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagccgtttccccttttcgccctgcgctgccatcccacagccctggcgctggct
gccattatgtactgtggccagggtctggcagccccggtaggggcgctcacaggtgtggaa
ccaggcgtgagtcaactcactctgaccacggataaccggactaaactgcaaatcgatgtg
cttaaacccagcctgctgcgcattcaggcgggagccggtggcgagttgagtgatgaaggc
agcaaggccgccgccatagtggtgaagcgcgactaccaacctgtggcttttgaactgagc
gatcagggtcaataccagttattgacgacctcggcgctggcgctgcggatctacaagcaa
ccgctgcgttttgccctgtatagggccgacaatcgcaccctgatcaccgaggaagtgcaa
agtctggagctgaaccaggacagcacggtacaaaccctgagtgcagacgctgatgagttt
ttctacggtgggggccagcagaacggtgcctttgagttcaggggcaagagtctggagatt
tcctattctggcggctgggaagagggcgacaggcccagtccggcgccgtttttcatgtcc
agcaagggctacggtattttgcgcaacacctggagtgatggcagctatgacttccgtggc
gcagattacctgcgcttggcgcaccaggaagggcgttttgacgcctatatcttcgccccc
ggcagcatacagcaggtgttggccgactataccgaactgaccggccgtgcccgcttgatc
ccccgctgggccttcgaatatggcgatgccgattgttataacgatggcgacaatatcaag
aagccaggcacggtgcccgagggctggagtgatggcccaacgggtaccactccggatgtg
atagcttcggtcgccaaaaagtatcgcgagcatgacatgcccggtggttggattttgcca
aacgacggctatggttgtggttataccgatctgcccgaggtggtctccggcctggcccaa
tatggtttccataccggcctttggaccgaaaatggggtggacaagattgcctgggaagtg
ggtagtgcgggcagtcgggcccagaaactcgacgtggcctggaccggccagggctaccag
tttgccctggatgccaaccaggcagcggccgaaggcatactcaacaattcggattcccgg
cccttcctctggaccgtgatgggctgggcggggattcagcgttatgcggtgacctggacc
ggcgatcagtccgccagctgggattatatccgctggcatattcccaccctgataggttcg
ggtctctctggtcaggcctacgccaccggtgacgtggatgccatttttggtggcagtccg
gagacctttacccgggatctgcagtggaagtcattcacgcctgtgctgatgggcatgtcc
ggctggtccaaggcggcccgcaaacatccctggtggtatgacgagccctatcgcagcatc
aaccgggactacctcaagctcaagatgcgcttgatgccctatatgtacaccacggcctgg
gagacggagcagacgggggcacccatagtgcgtggcctgatgtgggatcacgccacaggc
gccgagaccctgaccgaggcacacaaatatcagttcctggtgggcaaggatcttttggtg
gcgccggtgtttcgctcgcaggtcgccagcaaggggtggcgcgaggatgtgtttctgcca
aagggccagtggatagattactgggatggccgggtggtggaagcgcccgatgaggggctc
agcctggactatcaggttgatctcaaaaccctgccgctgtttgtccgcggcggtgccatt
ctgcccatgtatcccgaatccctgtatgacggtgagaagcccaaggatgtgctgaccctg
gatatctacccctggggcgagtccgagtaccaaatgtatgaagatgacggtagcagccgc
cgctatcgggtgggggaattcagccagcagcgtttcgcggtcaaggcgcccgaaggcgtg
gccggtgacatagaggtccacattgaagctgcccagggcagttttcaggggcaggagtcg
cagcgggcgtacgagctgatgatccacagccgggtcaagcctgaggccgtaaccctggat
ggtgccaaactcaagctgttcaaggatgccaaggccctggccaaggcgcgcagtggctgg
acctacagcgaggaaaagtacggcactgtgctggtcaaaacagacagggtgtccatccgc
gacaatctggtgctgcagcttgccatagacgccgccgcgaccctggccaccacagccggt
tatcctgctgcgcccgaacttggtaacgagctggctgccgatagcttgttggtgctggga
cgacccgccgaggagtccggccatccactggagaacgcctttgacggcaatccggatacc
tggttccgcaccaagcgggatcagtcccagaagacaggtgcccatgagttcaccctggcc
ctgggcgagcggcggctgatcgccggcttcgagattgcacctcgcaatgacaagcattgg
gaatatgggcaagtggccgactatgaggtttatctgggcgacaataacggcgagtggggg
gaacctgtcgccaagggacgattggccaagtcacagcaattgcaaaaggtggaattcccg
gccaagccaggcagtttgttgaggttcagggtgctcagtacccaggatcaggccgaagcc
gatcccatggtcaccgccgccaaggacaccgccaaggcctataacgctttgctgccaaaa
caggtgtcacccatcaccatttctgagttcagggtgttgcaacagtccgaacccaagacg
gccagaacccagttgttccttgctgagcaatcgccgcttcgcagcgacaatgccctgggg
ccggtggagcttaaccttgccaatggcgggcgtaagagcggtgatggtgcccagatgtca
atgaatggattgaagttcagcaagggattgggtgtgtcccacagcagtcgcatcgactat
cgcctgagtggccagtggcaattgctgcgggccgatctggggatagatgacagctgtcgc
agcaagggcggaatgcagttccaaatttggggtgatgacaggctgttgtatgactcgggg
ctggtacaggcccctgccgtggtcaaacccgagctggatatccgcggcgtgagtctgctt
agcctgcgtactaccggtggcagtccgggcgtgtgtggcaactgggccaacgcatccgta
ttgggctttcctgcggttcccggtcagctatag
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