Shewanella sedimentimangrovi: JYB85_18705
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Entry
JYB85_18705 CDS
T07846
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssem03009
]
JYB85_18705 (rlmF)
Enzymes [BR:
ssem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
JYB85_18705 (rlmF)
Ribosome biogenesis [BR:
ssem03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JYB85_18705 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_25
Methyltransf_12
PrmA
Methyltransf_23
DUF938
Motif
Other DBs
NCBI-ProteinID:
QSX37243
LinkDB
All DBs
Position
complement(4192407..4193315)
Genome browser
AA seq
302 aa
AA seq
DB search
MSINKSRAGKPGEPKSKGLHPRNAHNSGYDFPALCCAEPGLRAFLLTAKSGQSSIDFADP
RAVKCLNKALLKQHYGIVGWDIPKGYLCPPVPGRVDYVHYLADLLPKGAAIRVLDIGTGA
NGIYALLGASLYQWQLVATDIEPRSLANVRDILAHNPLLAERIDLRLQSNPTQIFANVAA
DDEHFDACMCNPPFHGSQAEASAGSKRKLQNLAGRPVGQVKLNFGGQHNELWCDGGERRF
LFAMIDESAARPQLCRWFTSLVSKGDNLRPCKRRLQALGATEVRVIEMTQGNKQTRILAW
RF
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaacaaaagccgtgcaggtaagcctggcgagcctaaaagtaagggcctgcat
ccgcgcaacgcccacaacagtggctatgactttcctgcactgtgctgcgccgagcccggt
cttcgggcgtttctgcttaccgccaagtcgggccagagcagtatcgactttgccgatccc
agagccgttaagtgtctcaacaaggccctgctaaaacagcactatggcattgttggctgg
gatattcccaaaggctatttatgtccacccgtccccgggcgggttgattatgtgcattat
ctggcggacttgttgccaaaaggtgcggcaatccgggtgctggatataggtacgggtgcc
aatggcatctatgccctgcttggtgccagtctctaccaatggcagctggtggccacggac
atagagccccgctccctggccaatgtcagagacatactggcgcataatcccttgctcgcc
gagcgcattgacctgagattgcaatccaatccaacccaaatctttgccaatgtggctgcg
gacgatgagcattttgatgcctgcatgtgtaacccgccattccatggttcacaggccgag
gccagtgcaggcagcaagcgcaaattgcagaatctggctggcaggccggtgggacaggtg
aaactcaattttggtggccagcacaatgagctgtggtgcgatggtggcgaacgtcgtttt
ctgtttgccatgattgatgagagtgcggccaggccacagctgtgtcgctggttcacctct
ttggtttccaaaggtgacaatctgaggccctgtaaacgccgtctgcaggcattgggagca
actgaggtgcgggtgatagagatgacccagggcaataagcagacccggatacttgcctgg
cgtttttag
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