Shewanella sedimentimangrovi: JYB85_18910
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Entry
JYB85_18910 CDS
T07846
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssem03016
]
JYB85_18910 (mnmE)
Transfer RNA biogenesis [BR:
ssem03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
JYB85_18910 (mnmE)
Prokaryotic type
Methyltransferases
JYB85_18910 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
ABC_tran
Ras
Gtr1_RagA
AAA_28
Roc
MMR_HSR1_Xtn
SRPRB
Arf
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QSX37278
UniProt:
A0ABX7R0I4
LinkDB
All DBs
Position
complement(4238118..4239479)
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AA seq
453 aa
AA seq
DB search
MTTDTIVAQATAPGRGGVGIIRISGKRAATVAQAVLGHLPMTRYADYCDFKSADGTVLDQ
GIALFFKGPNSFTGEDVLELQGHGGQVVLDMLIRAVLAVEGVRIARPGEFSEQAFMNDKL
DLTQAEAIADLIDATSEQAAKSALQSLQGEFSREVHELVDKVTNLRLYVEAAIDFPDEEV
DFLSDGKIAAALYGIIAKLDEVQASAKQGAIIREGMKVVIAGRPNAGKSSLLNALAGKES
AIVTEIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTTDTVEQIGIERAWNEIASADRVLF
MVDGTTTDAVDPHDIWPDFIDRLPKGLGVTVVRNKADLTGETLEVTEEQGHAVYRISAKT
GLGVDSLKQHLKSLMGYQSNLEGGFIARRRHLEALAIAAEHLQQGKVQLEVFQAGELLAE
ELRMTQQALSEITGQFTSDDLLGKIFSSFCIGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgacaactgacactattgtggcccaggccacagccccgggccgaggcggcgtgggcatc
atccggatttcgggcaaacgggctgccactgtggcccaggctgtgctgggtcacctgccc
atgacccgttacgccgactactgcgatttcaagtctgccgacggcactgtgctggatcag
ggcattgccctgttcttcaagggtcccaactccttcaccggtgaagacgtactggaattg
cagggccacggcggccaggtggtgctggatatgttgatccgcgccgtacttgcagtggaa
ggcgtccgcatcgcccgtcccggtgagttcagcgaacaggcctttatgaatgacaaactg
gacctgacccaggccgaggctattgccgatcttatcgacgccaccagcgagcaggccgcc
aagagcgccctgcaatccctgcagggcgaattttcccgtgaggttcacgagctggtggac
aaggtcaccaacctgcgtctgtatgtggaagccgccatcgactttcccgatgaagaagtg
gacttcctttccgacggcaaaatagcggcggccctctacggcatcatagccaagctcgat
gaagtgcaagccagcgccaagcagggtgccattatccgcgaaggcatgaaggtggtgatt
gccggtcgtcccaacgccggtaaatccagcctgcttaacgctcttgccggcaaggaatcg
gccatagtcacggaaatcgccggcaccacccgcgatgtgctgcgcgaacatatacacctc
gatggcatgccgctgcacatcattgacaccgccggccttcgagacaccacggacacagtg
gagcagataggcatagagcgggcctggaatgaaatagccagcgccgatcgggtgctgttc
atggtcgatggcaccaccacggatgccgtagatccccacgatatctggcctgactttatc
gatcgtctgccaaaaggactcggcgtcactgtggtgcgcaacaaggccgatctcaccggc
gaaacgctggaagtcacagaggaacaaggccatgcagtgtatcggatctcggccaaaacc
ggactgggggtcgacagtctgaagcaacacctcaagagcctgatgggctaccagagcaat
ctcgaaggtggctttatcgcccgccgtcgccacctggaagccctggcaatagccgctgaa
catctgcaacagggcaaggtacaactggaagtcttccaggcgggagagctgttggccgaa
gaactgcgcatgactcagcaggcgctgtctgaaatcacgggtcaattcacctctgacgac
ctgctgggcaagattttcagctccttctgtatcggcaaatga
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