Solea senegalensis (Senegalese sole): 122758028
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Entry
122758028 CDS
T07721
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04010
MAPK signaling pathway
ssen04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122758028
04020 Calcium signaling pathway
122758028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122758028
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122758028
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
122758028
NCBI-ProteinID:
XP_043867744
LinkDB
All DBs
Position
LG21:complement(17356714..17432064)
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AA seq
2187 aa
AA seq
DB search
MKAMVPLLQIGLLLFFAIVMFAIIGVEFYMGKFHTTCFKIDTDEIAADWPCGLEPPARTC
PNGTQCREYWPGPNFGITNFDNILFAVLTVFQCITMEGWVEILYSTNDVAGNTWNWLYFI
PLIIIGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEE
VLLEEEDEIAEEKSPLDGAWYKRKQNLPVLKRGKSKKGKNDLIGAEEGEDPFADISSAAP
PGSPFGRASVKSGGKLDSSSYFRRKEKRTRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIV
HYDQPEWLTRALYTAEFVFLGLFLTEMSLKMYGLGARNYFHSSFNCFDFGVIVGSIFEVI
WDMIKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVV
FALLGMQLFGGHFTPKDSGSGRFNFEEKTPTTNFDTFPAAILTVFQILTGEDWNAVMYHG
IESQGGVRRGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQEEAANKK
LALQKALEVKEVSPMSAANISITAFVKQNRDAISRRSSINSIQSPTYYTVSSSPVRRILS
KEQRGSKAMSVWEQRTNQLRRHNMRASSEALFNELDPEERLRMTSALHLHPDMKTHLDRP
LVVESRNGDKQEVGDARQDGVGDNFHTHSRKHHRHHNRNGESRDGGEGRGGRHHAHHSRG
RDHSSDSAPVKERRYSRDGGLVHRHHHHLAGSPEEENNDLHGGERGHRHHHYHHPPKEGN
GRIGNGAHGESKNNGDTKGRCSRILRTQSTLDGDDCKRNRNGARGHREKQTDAEDSGLAS
SPLQLMHSSLSLGEKQEDEDNQKNSTRASQAGLNSNAIHIPVTITAPPGETTIIPMNSID
CDNFQISEEKKDLEDEEAANGPRQILPYSSMFVFGQTNPVRRLCHYVVNLRYFEMCILMV
ITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPGSYFRDLW
NILDFIVVSGALVAFACSSLMGSQQTVARGTKGKDINTIKSLRVLRVLRPLKTIKRLPKL
KAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKALEKDCRGQFLD
YDRDNVEAQPREWRKYDFHYDNVLWAFLTLFTVSTGEGWPMVLKHSVDATYEDQGPSPGF
RMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKP
LTRYMPENKLSYQYKMWKFVVSPPFEYAIMTLIALNTVVLMMKFYGAPDLYESMLKYLNI
LFTALFTLECILKIIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEIKTDKMINLSFLRL
FRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNED
TSISHHNNFQTFFQALTLLFRSATGEAWHDIMLACLSNRPCDKLSGSVGKECGSDFAYFY
FVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWAEYDPAACGRIRYQ
DMYKLLRCISPPLGLGKKCPNRVAYKRLVRMNMPIADDNTVQFTSTLMALIRTALEIKLA
SGVLAQHLCDADLKRELKRVWPNLSQKTIDLLVTPHKYNELTVGKVYAAHMIFDFYKQNR
AKRLQQQQQQQHAGGLQCKLGSLFRPVLPLTHIQEVEPPTCSPKQPLSPQPAPVTQPLAP
PTSTTTAVTSTNKDSVLNQRNSIRHSQSQSGGFSPESQRPKARRKLQRGQSEDMPYSTRP
QDVVQLRQVEVEDVSDTEAYPGLDAHYRAASLPRLNAEYYRIYPRHAPGTHLAPIVDLSP
IKRSASSLTPLRHHEAALREYDLERPGRAQSPTGPGHVLQGQDRTHHHHHHHRCHRRRDK
DKDRKQKCVDRAASVQPSSTVDSFTDPSDEGLSRERPRERDRSRPHERRHHSSAGEKQRY
YSCERYGSREQCHARSAGPSRSTSPGEGQDSGFFKLYGISVGRTGPVTSDLNTPGRSRRQ
LPQTPLTPRPAVAYKTANSSPLLSSAGTTATGHQTRFSRGLSEHERLLWDHVSPIPVTRI
GSDPNVNRTEDTEDFQDAVSSHGGGGGGGGGRSARTTASTTAATAAAAPVTQGRVVPNGY
HFTLNSVSGQGSRGAGSLRERDEEDWC
NT seq
6564 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccatggtccctctgcttcagatcggtctgctgctcttcttcgccatcgtcatg
ttcgccatcatcggcgtggagttctacatgggaaagttccacaccacgtgtttcaagata
gacacagatgagatcgcagcagactggccctgtggtctggagcctccggccaggacgtgt
cctaacgggacccagtgcagagagtactggcccggacccaactttggcatcaccaacttt
gacaacatcctgtttgcggtgctcaccgtgttccagtgcatcaccatggagggctgggtg
gagatcctctacagcaccaatgatgtcgcaggaaacacgtggaactggctctacttcatc
cccctcatcatcatcggctccttcttcatgctcaacctggtgctcggtgtcctctcagga
gaatttgccaaagaacgcgagcgtgtggagaagaggcaggagttcctgaagctccgtagg
cagcagcagatagagcgagagctcacaggatacttggagtggatctgtaaagcagaggag
gtgttgctggaggaggaggatgagatcgcagaggagaagtccccgctggacggcgcctgg
tacaagaggaaacaaaacctgccagtcctgaaacgaggcaaatcaaagaaaggtaaaaac
gacctcatcggtgccgaggagggggaggatcctttcgccgacatctcctctgccgctccc
cccggctcgccgtttggtcgcgccagcgtgaagagcggcggcaagttggacagctcctcc
tacttccgccgcaaggagaagaggacgcgcttcttcatccggcgcatggtgaaggcccag
agcttctactggatcgtcctgtgtctggtcggcctgaacacgctgtgcgtggccatcgtt
cactacgaccaacccgagtggctcacgagggcgctctacacggcagagtttgtcttcctg
ggtttgttcctgactgaaatgagtctgaagatgtacggactcggagcgcgcaattatttc
cattcctccttcaactgctttgatttcggggtgattgtggggagtattttcgaggtgatc
tgggacatgattaaacccggagcgtcgttcggcatcagcgtgttgagagcgctgcggctg
ctgcgcatattcaaagtcaccaaatactggaactcgttgaggaacctggtggtttccctc
ctgaactccatgaagtccatcatcagcctgctcttcctcctcttcctcttcatcgtggtc
ttcgctctgctcggcatgcagctgtttggaggacatttcacgcccaaggattcaggttct
ggcaggtttaactttgaagagaagacgcccacaacaaacttcgacaccttcccggcggcc
attctcaccgtgttccagattctgaccggcgaggactggaacgccgtcatgtaccacggc
atcgagtctcagggaggcgtccgccgcggcatgttctcctccatctacttcatcgtcctc
actctgtttggaaactacacactcctcaacgtcttcctggccatcgccgtcgataacctc
gccaacgcacaggagctgaccaaggatgaagaggagcaggaggaggcagccaataagaag
ctggcgctgcagaaggctctggaggtgaaggaggtcagccccatgtcggcggctaacatc
tcaatcactgcttttgtaaagcaaaatcgagacgcgatctctcgcaggtcgtccatcaac
agcattcagtcaccgacatactatactgtctcctcgtctcccgtccgacgaatcttgagt
aaggagcagcggggaagcaaagccatgtccgtgtgggagcagaggaccaatcagctgagg
agacacaacatgagggcgagcagcgaggccctgttcaacgagctcgaccctgaggaacgc
ctccgcatgacctccgccctccacctgcaccccgacatgaagacccacttggaccggccg
ctggtggtggagtccaggaacggcgacaaacaggaggtgggagatgcccggcaggacggg
gtgggagataacttccacacgcactccaggaaacatcaccgccaccacaacagaaacggg
gagagcagagatggaggcgagggcaggggggggcggcaccacgcccaccacagcaggggc
agagatcacagcagtgatagcgccccggtgaaagagaggaggtacagtcgagacggagga
ttggtgcacaggcaccaccaccacctggccggatcacccgaggaggagaacaatgacctg
catggaggagaacggggacatcgccatcaccattaccatcatccacccaaagaagggaac
ggaaggatagggaacggtgcacacggagagtccaagaacaacggagacacgaagggacgc
tgctctcggatactcagaactcagtctactctggacggagacgattgtaagaggaacaga
aacggagccagaggccacagggagaagcagacggatgctgaggacagcggcctcgcctcc
agtcctctgcagctgatgcacagcagcctgagtctcggggagaagcaagaggacgaggac
aaccagaagaactccaccagggccagtcaggcgggactgaacagcaacgccatccacatc
cccgtcaccatcactgcacctcctggagaaaccaccatcatacccatgaacagcatcgac
tgtgacaacttccaaatcagtgaggagaagaaagatctggaggacgaggaggcagctaat
gggcctcgacagatccttccctacagctccatgtttgtcttcggacaaaccaacccggtg
cgacggctgtgtcactacgtggtcaacctgcgctactttgaaatgtgcatcctcatggtc
atcaccatgagcagcatcgccctggcagccgaggatcccgtgcaagccaacgcgccgcgg
aacaacgttctgaagtatctggattatgtcttcacgggagtcttcacttttgagatggtg
atcaagatgatcgacttaggcctcctcctccatcctggatcttatttccgtgacctgtgg
aacattcttgatttcatcgtggtcagtggagctctggtggcctttgcgtgctcgagcctg
atgggatcgcaacaaactgtggccagggggacgaaaggcaaagacatcaacaccatcaag
tccctgcgggtcctccgagtcctgcggccgctcaagaccatcaaacgactgcccaagctg
aaggccgtgttcgactgtgtcgtgaactctctgaagaacgtcctcaacatcctcatcgtc
tacatcctcttcatgttcatcttcgccgtcatcgccgtgcagctcttcaaaggcaaattc
ttctactgcaccgacgagtccaaagctctggagaaagactgcagaggacagtttctggac
tacgacagagacaacgtggaggctcagcccagggagtggaggaagtacgatttccactac
gacaacgttctctgggcttttctgacgctcttcactgtttccaccggagaaggctggccc
atggtcctcaaacactctgtggacgcgacgtacgaggaccagggtcccagcccgggcttc
cgcatggagacgtccatcttctacgtggtctactttgtcgtgttcccgttcttcttcgtc
aacatcttcgtggcgttgatcatcatcactttccaggagcagggagacaaggccatgtcg
gagtgcagtctggagaagaacgagagagcttgtatcgactttgccatcaacgccaaaccc
ctgacgagatacatgccagagaacaagctgtcgtaccagtacaagatgtggaagtttgtg
gtgtcgcctccgtttgagtacgccatcatgacgctgatcgccctcaacacggtcgtgctg
atgatgaagttttacggagctccagacttgtacgagtccatgctgaaatacttgaacatc
ctcttcacggcgctcttcaccctggagtgcatcctcaagatcatcgccttcggtccactg
aactacctgaaagcagcgtggaacgtgtttgactttgtgactgtgctcgggagcatcacc
gacatcttggtcacagagattaagacggacaaaatgatcaacctaagtttcctgagactg
ttcagagcagctcgtctcatcaaactgctgcgtcagggatacaccatccgtatcctgctg
tggacatttgtccagtcctttaaggctctgccgtacgtctgcctcctcatcgccatgctc
ttcttcatctatgccatcattggcatgcaggtgtttggaaacatcgagctgaacgaggac
acgtccataagccaccacaacaacttccagaccttcttccaggccttgactcttctcttc
aggagtgcgacgggcgaggcgtggcacgacatcatgctggcgtgtctgagtaaccgaccg
tgtgataagctctcggggagcgtgggcaaggagtgcgggagtgactttgcctacttctac
tttgtctccttcatcttcctctgctccttcctgatgttgaacctctttgtcgccgtcatc
atggacaactttgagtatctgaccagagacgcctccatcctcggacctcatcacctggac
gagttcatccgcgtgtgggcagagtacgaccccgcggcgtgcgggaggatacgctatcag
gatatgtacaaattgttacgttgtatttcgccccctcttggtctggggaagaagtgcccc
aacagggtggcttataagcgcctggtgaggatgaacatgcccatcgccgacgacaacacg
gtgcagttcacgtccacgctcatggctctgattcgcacggcgctggagatcaagctggcg
tctggcgtcctggctcagcatttgtgcgacgccgacctgaagagggagctaaagagggtt
tggccgaacctgtcgcagaagaccatcgacctgctggtgacgccacataaatacaatgag
ctgacagtggggaaagtctacgccgctcacatgatctttgacttctacaagcagaatcga
gctaagcgacttcagcagcagcagcagcagcagcacgcaggaggactgcagtgtaaactg
ggatcgttgttccgacccgtgctgcccctcactcacatacaggaagtggagccgccgacc
tgcagccccaaacagcccctctcaccccagcccgcacctgtcactcagccattagcgccg
cccacttccaccaccacagccgtcacctcgacgaacaaggactcagtactgaaccagagg
aattccatcagacattcccaatcccaatccggaggattctcgccggaatcacagaggccc
aaagctcggaggaaactgcagcgtggtcagtcagaggacatgccgtactccaccagacct
caggacgtggtgcagctgagacaggtggaggtggaggacgtctcagacacagaagcgtac
ccaggtctggacgctcactacagagcggcgtctcttcctcgtctcaacgccgagtattac
cggatctaccctcgccacgcccctgggacccacctggcaccgatcgtcgacctcagtccg
ataaagcgctccgcgtcctcgctgactcccctgcgccaccacgaggccgcgctgagggag
tacgacctggagcggcccggccgcgcccagtccccgacgggaccgggacacgttcttcag
ggtcaggacagaacccaccaccatcaccaccaccaccgctgccaccgacgcagggacaag
gacaaggaccggaagcagaagtgtgtggacagagcggcgtcagtgcagccgtccagcact
gtcgattcgttcaccgacccctcagatgaaggtctgtccagagagcgcccgagggagcgc
gaccgcagccggccgcacgagaggagacaccactcgtcggccggggagaagcagcgctac
tactcgtgcgagcgctacggcagcagggagcagtgccacgccaggtcagctggtcccagc
agatccacgtctcctggtgaaggacaggactctgggttctttaaactgtatggcatcagc
gtgggtagaactggcccggtcacctcagatctgaatactccgggtcgcagtcgcaggcag
ctgccacagacgcccctcacccctcgccccgccgtcgcctacaagaccgccaactcctca
ccgctcctgtccagtgctggcaccactgcgacgggacaccagactcgcttcagccgcggc
ctttcagagcacgagcgattactctgggaccacgtgtctccgataccggtcacccgcatc
ggctcggaccctaatgtaaaccggacagaggacacagaggactttcaggacgctgtgagc
agccacggaggaggaggaggaggaggaggaggacgctctgccagaaccactgcctcaacc
acagccgcaactgctgctgccgcacccgtcacacagggccgggtggttcccaacggatac
cacttcaccctcaactctgtgtccggacagggcagcagaggagcaggaagtctcagggag
agggacgaggaggactggtgctaa
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integrated database retrieval system
