Solea senegalensis (Senegalese sole): 122758139
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Entry
122758139 CDS
T07721
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04210
Apoptosis
ssen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122758139 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122758139 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssen04812
]
122758139 (sptan1)
Cytoskeleton proteins [BR:
ssen04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122758139 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
122758139 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
EF-hand_5
SH3_10
Spectrin_3
Motif
Other DBs
NCBI-GeneID:
122758139
NCBI-ProteinID:
XP_043868009
LinkDB
All DBs
Position
LG21:18911797..18945903
Genome browser
AA seq
2478 aa
AA seq
DB search
MDAAGKVLETAEDIQERRQQVLDRYRRFKDLSVLRRQKLEDSYRFQFFRRDADELEKWIQ
EKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAGAIIKLDDTGNLMINEGHFASETIR
TRLEELHRLWDLLLQKTKEKGMRLLQAQKLVQYLRECEDALDWISDKEAIVTSEELGQDL
EHVELLQKKFEEFQTDLAAHEERVNEVNQLASKLIQETHPEAELIVRKQEEVNAAWQRLK
GLAQQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGLE
RDLAALEDKVNTLGGDAERLQETHPQNAAQIHLKKDELVTNWEQIRTLAAERHTRLNDSY
RLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFRSTD
EAGQALLNTGHYASDEVKEKLGILTEEKESLLELWEVRRQQYEQCMDLQLFYRDTEQVDN
WMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYAK
EDVATRRDALLSRRNALHERAQSRRAALEDSFHLQQFFRDSDELKSWINEKMKTATDESY
KDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYASTEVAGRMEEVSSQWK
KLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTSVQNLQKKHA
LLEADVAAHQDRIDGITIQARQFQEAGHFDADNIRKKQEALVTRYEALREPMAARKQKLS
DSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEITGHEPRIK
AVSQKGDAMVEEGHFAADDVKVKLAELHGRWDTLKAKASQRRQDLEDSLQAQQYFADANE
AESWMREKEPIVGSVDYGKDEDSAEALLKKHEALMSDLSAYGSSIQSLKEQAQSCRQQVA
PTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV
KKLDPTQSSSRENLLDEHGSIALRQDQIENQPVTKEACSVSVRMKQVEELYGTLQELGDK
RKDMLEKSCKKFMLFREANELQQWIHEKEGALTNEEVGSDLEQVEVLQKKFDDFQKDLKA
NESRLRDINKVASELESEGLMAEEAPMVQAQQQELLGAAPGTDEADSKTASPWKNIRLAV
QTTANFNTIKELNNRWRSLQQLAEDRSNMLGSAHEVQRFHRDADETKEWIEEKNQALNTD
NYGHDLASVQALQRKHEGFERDLAALGDKVNSLGEMAERLIQSHPEAVDDIQEKCTELNT
AWSSLVGRADQRKDKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSEELAKDVTGAEALLE
RHQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPEIQQKLEALDHERADLEKAWVQRRM
MLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQEE
KIAALQSFADQLVGADHYAKPEIFNRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRD
VDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDTGN
ALIQRGACAGSEDAVKVRLNALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDFWL
SEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMGSNAFDTSL
VKDKRDAVNGRFTKIKSMAAGRRAKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDYGR
DLTGVQNLRKKHKRLEAELGAHEPAIQSVLDTGKKLSDDNTIGQEEIQQRLAQFVDHWKE
LKDLSGARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKHEA
FETDFTVHRDRVNDVCTNGDELIKKNNHHVDNISAKMAALREKVSELERAAAQRKAKLDE
NSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGIT
NITALKDQLLAAKHVQSKAIEARHAALMKRWNQLLSNSAARKKKLLEAQEHFRKVEDLFL
TFAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHEAFRSSLSSAQADYNQLAELD
QQIKSYQVVSNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHA
NAFHQWLQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEE
ALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKH
FDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILNIVDPNRDGNVSLQEYMAF
MISRETENVKSSEEIESAFRALSAENKPYVTKEELYQNLTKEQADYCLSHMKPYLDSKGR
ELPTAFDFVEFTRSLFVN
NT seq
7437 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgctgggaaagtgctggagacagccgaggacatccaggagcgtcggcagcag
gtgctcgaccgctaccgacgcttcaaggacctgtccgtgttgcggcggcagaagctggag
gactcttaccgcttccagtttttccgccgcgacgctgacgagctggagaagtggatccag
gagaagctgcagatcgcctccgatgagaactacaaggacccgtccaacctgcagggtaag
ctgcagaaacatcaggcctttgaagctgaagttcaggccaacgccggagccatcatcaaa
ctggacgacaccggaaacctcatgatcaacgagggacactttgcctctgagaccattcga
actcgtctggaggagctgcatcgattgtgggacctcctgctgcaaaagaccaaagaaaaa
ggcatgcgtctcctgcaggcgcagaaactggtccagtacctgcgcgagtgcgaggatgcc
ctggactggatcagtgataaggaggccatcgtcacctctgaggagctgggccaggacctg
gagcatgtcgagctcctgcagaagaaatttgaggagttccagactgacctggcggcccac
gaggagcgcgtgaacgaggtgaaccagctggcgtccaagctgatccaggagacgcacccc
gaggccgagctcattgtccgcaagcaggaggaggtgaacgctgcgtggcagcggctgaag
ggcctggcccagcagagacagggcaagctgttcggagctgctgaggtgcagcgattcaac
agggatgtggacgagaccatcagctggatcaaggagaaagagcagctcatggcctccgac
gactttggtcgtgacctggccagtgttcaggctctgctgcgaaaacatgagggtctggag
agagacctggctgctctggaggacaaggtcaacactctgggtggagacgcagagcgcctg
caggagacacacccacaaaatgccgcccagatccacctgaagaaggacgagctggtcact
aactgggaacagatccgcactctggctgccgagcgtcacacccgcctcaacgactcttac
cggctgcagcgtttcactgcagacttcagggatctgaccagctgggtgacggagatgaag
gccctgatcaacgctgatgaactggccaatgacgtggctggagctgaggctctgctcgac
cgccaccaggagcacaagggtgaaattgatgctcacgaggacagtttcagatccactgat
gaagctggacaggctttgctcaacacaggacactacgcctcagacgaggtcaaggagaag
ctgggcatcctgactgaggagaaggagtctctgctggagctgtgggaggttcgcaggcag
cagtacgagcagtgcatggacctgcagctcttctacagagacacagagcaagtcgacaac
tggatgagcaaacaagaggcttttctcctgaatgaagatcttggtgactccctggacagt
gtcgaggctctgctgaagaaacacgaagactttgagaagtcacttagtgcccaggaggag
aagatcactgccctggacgagtttgccaccaagctgattcagaacaaccactacgccaaa
gaagacgtggctacacgcagagatgctcttctcagccgtcgtaacgctctgcatgagcga
gctcagtctcgccgcgctgccctggaggactcgttccacctgcagcagttcttcagggac
tctgacgagctcaagagctggatcaacgagaagatgaagacggccacagatgaatcttac
aaggatccttccaaccttcagggtaaagttcagaaacaccaggcttttgaagcagaactg
tctgccaaccagagccgcatcgacgctctgcagaagtcaggccaggagctgctggacggg
aaacattacgcctccaccgaggtggcaggtcgcatggaggaggtcagctcccagtggaag
aaactgcttgaggccacagagctgaaaggcatcaagctgcgtgaggccaaccagcagcag
cagtttaacaggaacgttgaggacatcgagctgtggctgtacgaggtcgagggtcacctg
gcgtcagacgactacggaaaagacctgaccagcgtccagaacctgcagaagaagcatgct
cttctggaggcagacgtggctgctcaccaggaccgcatcgacggcatcaccattcaggcg
cgtcagttccaagaggccggacatttcgatgccgacaacatccgtaagaaacaggaggct
ctggtcactcgttacgaagctctgcgcgaaccgatggctgcgcgtaagcaaaaactgtcc
gactcactcaggctccagcagctgttcagagacgtggaggacgaggagacgtggatccga
gaaaaagagcccattgctgcctccaccaacagaggcaaagacctgattggagtccagaac
ttgctgaagaagcaccaggctctgcaggctgagatcaccggacatgagccgcgcattaag
gctgtctcccagaaaggagatgccatggtcgaagaaggacactttgctgctgacgacgtg
aaagtgaagctggctgaactgcacggacgctgggacacgctgaaggccaaagcctctcag
aggagacaggacctggaggactcgctgcaggctcagcagtactttgctgatgctaacgag
gccgagtcgtggatgagggagaaggagccgatcgtggggagtgtcgactacggcaaagac
gaggactctgctgaggctctgctgaagaagcacgaggctctgatgtccgacctgagcgcc
tacggcagcagcatccagagcctgaaggaacaggctcagtcctgcaggcaacaagtggca
ccaaccgatgacgagaccgggaaggagctggtcctggccttgtacgactaccaggaaaag
agcccgcgtgaagtgaccatgaagaagggcgacatcctcactctgctcaacagcaccaac
aaggactggtggaaggtggaggtgaacgaccgccagggcttcgttcctgctgcttacgtg
aagaaactggacccgacacagtcgtcctccagggagaacctgctggacgaacacggcagc
atcgccctgcgtcaggaccagatcgagaatcagccggtcaccaaggaggcctgcagcgtg
tctgtgcgcatgaagcaggtggaagagctgtatggaactctgcaggagctcggagacaaa
cgcaaggacatgttggagaagagctgtaagaagttcatgttgttccgtgaagccaacgag
ctgcagcagtggatccacgagaaggaaggtgccctcactaacgaggaggtcggctctgac
ctggagcaggtggaggtcctgcagaagaagtttgacgacttccagaaggacctgaaggcc
aacgagtctcgtctgagggacatcaacaaagtggcgtctgagctggagtctgaaggtctg
atggcggaggaggctcccatggttcaggctcagcagcaggagcttcttggtgctgctcct
ggaacggatgaagccgattctaagactgcgtctccatggaagaatatacgcttggctgtt
caaacaacggctaactttaatactatcaaggagctgaataatcgctggcgctcactgcag
cagctggctgaggacaggagcaacatgctgggcagcgctcacgaggtgcaacgattccac
agagacgccgatgaaaccaaagagtggatcgaggagaagaaccaggccctcaacaccgac
aactatggtcacgacttggccagtgtccaggctctgcagcgcaaacacgaaggcttcgag
cgagacctggcagccctcggcgacaaggtgaactctctgggtgagatggccgagcgtctg
atccagtcccaccccgaggccgtggacgacatccaggagaagtgcaccgagctcaacacg
gcctggagcagcctggtgggacgtgctgaccaacgcaaggacaagctgggcaactcccac
gacctgcagcgcttcctgtccgacttcagagatcttatgtcgtggattaacggcatccga
ggattagtgtcttcagaggaactggctaaagacgtgaccggagctgaggctcttctggaa
agacaccaggaacatcgcacagagatcgacgctcgtgccggaaccttccaggcctttgaa
cagtttggtcagcagctgctggcccgaggccactacgccagccctgagattcagcagaaa
ctggaggctctggaccacgagcgcgccgacctggagaaggcctgggtgcagcgccgcatg
atgctggaccagtgcctggagctccagctcttcaacagagactgtgaacaggccgagaac
tggatggcggctcgtgaagctttcctcgccagtgacgacaaaggagactctctggacagc
gtggaagctctgatcaagaaacacgaggactttgacaaggccattaatgtgcaggaggag
aagatcgctgctctgcagtccttcgctgatcagctggttggagccgatcattacgccaaa
cctgagatcttcaaccgccgcaatgaagtcctcgacaggtggcgccgcctgaaggcccag
atgatcgagaagcgttctaaactgggtgaatctcagacgctgcagcagttcagccgggac
gtggacgagattgaggcgtggatcagtgagaagctgcagacggcaactgatgagtcctac
aaggatcccactaacatccagctgtccaagctgctgagtaagcatcagaaacaccaggcg
tttgaggcggagcttcacgccaacgcagacagaatccgcggagtcatcgacaccggcaac
gccctcatccagagaggagcctgcgccggcagcgaggacgccgtcaaggttcgtctgaac
gctctggacgaacagtggcagttccttgtcaacaaatctgcagagaagagccagaaactg
aaggaggccaacaagcagcagaacttcaacacgggcatcaaggactttgacttctggctc
tctgaggtggaagctcttcttgcttctgaagactacggcaaagatctggcctcggtcaac
aacctactgaagaaacaccagctgctggaggctgatatttctgcccatgaggatcgtctg
aaggatctgaacggtcaggccgacagcctgatgggcagcaacgccttcgacacctcactg
gtgaaggacaagcgtgacgcagtcaacggccgcttcaccaagatcaagagcatggctgcc
ggccgccgtgccaaactcaacgagtcgcaccgcctgcaccagttcttcagggacctggac
gatgaagaatcttggatcaaagaaaagaagttgcttgtgagttcggaggactacggacgt
gatttgacgggtgtacagaatctgaggaagaaacacaagagactggaggccgagctggga
gcgcacgagccggccattcagtcggtgctggacactgggaagaagttgtctgacgacaac
accatcggtcaagaggagatccagcagagactcgcccagtttgtcgaccactggaaggaa
ctgaaagacttatctggagcgaggggtcagaggttagaggagtcgctggagtaccagcag
tttgtggcgaacgtggaggaggaagaagcatggatcaatgagaagttgaatctggtggga
agtgaggactacggtgatacgctggctgctgtgcagggtttactgaagaaacacgaggcg
tttgagacggacttcaccgtccatcgagacagagtcaacgacgtgtgcactaacggagac
gagctcatcaagaagaacaaccatcacgtggacaacatcagcgccaagatggcggcgctg
cgagaaaaagtgtcagagctggagagggcggcggcacagaggaaggccaagctggacgaa
aactccgccttcctgcagttcaactggaaggccgacgtggtcgagtcctggatcggtgag
aaagaaaacagcctgaagacggacgactatggcagagacctatcctctgtccagactctg
ctcaccaaacaggagacgtttgacgctggcctgcaggccttccagcaagagggcatcacg
aacatcacggctctgaaggaccagcttctggccgccaaacacgtccagtccaaagccatc
gaagctcgtcacgccgcgttgatgaagcgctggaaccagctgttgtccaactccgccgct
cgcaagaagaagcttctggaggctcaggagcatttcagaaaggttgaagatctgttcctg
acatttgccaagaaggcatcggccttcaacagctggtttgagaacgcagaggaggatctg
accgacccggtgaggtgcaactctctggaggagatcaaggcgctgcgcgaggcccacgag
gcgttccgctcgtcgctgagctcggctcaggccgactacaaccagctggccgagctggac
cagcagatcaagagctaccaggtggtgtccaacccgtacacctggttcaccatggaggcc
ctggaggagacgtggaggaacctgcagaagatcatcaaggagcgagagctggagctgcag
aaggagcagagacgacaggaggaaaacgacaagttacgacaggagtttgcgcagcacgcc
aacgccttccaccagtggctgcaggagaccaggacgtaccttttggacgggtcgtgtatg
gtagaagagtctggaacgctggagtcacagctggaggccaccaagcgtaagcaccaggag
atccgggccatgcgcagtcagctgaaaaagattgaagacttgggcgcagccatggaagaa
gctctgatcctggacaacaagtacacagagcacagcacggtgggtctggcacagcagtgg
gaccaactggaccagctggggatgaggatgcagcacaacctggagcagcagatccaggcc
aggaacaccacaggagtgacggaggaggctctgaaggagttcagcatgatgttcaaacac
tttgataaggagaagtcgggtcgtctgaatcaccaggagtttaaatcgtgtctgcgctcg
ctcggctacgatctgcccatggtggaggagggagaaccagacccagagtttgaggccatt
ctcaacatcgtggatccaaatagggatgggaacgtgtcgctgcaggagtacatggcgttc
atgatcagccgtgagacagagaacgttaaatccagcgaggagatcgagagcgcattccga
gctctgagtgccgagaacaaaccatacgtcactaaagaagagctgtaccagaacctgacg
aaggaacaggccgattactgcctctcacacatgaagccgtatctcgacagcaaaggccgc
gagctgccgacggccttcgactttgtcgaattcacccgctcgcttttcgtaaactaa
DBGET
integrated database retrieval system
