Solea senegalensis (Senegalese sole): 122758166
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Entry
122758166 CDS
T07721
Symbol
notch1a
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122758166 (notch1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_4
Ank_5
Ank_3
EGF_3
JAG1-like_EGF2
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
122758166
NCBI-ProteinID:
XP_043868061
LinkDB
All DBs
Position
LG21:complement(6001970..6025301)
Genome browser
AA seq
2480 aa
AA seq
DB search
MYRFFVKLTFLITAVVFTQGLKCSVPTESCLNGGRCEPTSNGNGECKCPSDFVGSRCQYP
SPCSPSPCRNGGECRPVSHGNTFDFRCVCRLGFTDRLCLTPSNHACMSSPCRNGGTCDLI
TLAAYRCRCPPGWSGKTCQLANPCASNPCANGGQCSAFDSTYICTCPPAFHGQTCKQDIN
ECAQAPSPCLNGGMCVNEVGSYHCRCPTEYSGKHCETRYLPCSPSPCLNGGTCVQKGDTI
YDCSCLPGFTGQHCEHNIDDCPGHNCQNGGVCVDGVNTYNCQCPPHYTGQYCTENVDECE
LMPNACQNGGTCHDTHGSYHCVCVNGWTGDDCSENIDDCASAACYHGATCHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPPGYTGSACNLDIDECSLGA
NPCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECMSNPCHNDATCLDQIGGFHCICMP
GYEGVFCHINADECATQPCFNNGKCIDKINSFQCECPKGFSGNLCQVDIDECASTPCKNG
AKCTDGPNKYTCECAEGYTGQHCEIDINECYSDPCHYGTCKDGLASFTCHCHPGYTGRLC
ETNINECLSQPCKNGGTCQDRENTYICSCPKGTAGFNCEVNLDDCKSKPCDYGRCIDKIN
GYECACEPGYTGSMCNINIDECAINPCHNGGTCVDGINRFTCLCPEGYNDATCLSQVDEC
GSNPCIHGRCQDLINGYKCTCDSGWSGTNCDINNNECESNPCMNGGTCKDMTSGYHCTCR
VGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGDNCETLLAPCNPRPCKN
GGVCKEAEDYQSFSCICPEGWQGQTCEIDINECVKGPCRNGAICHNTMGGYQCKCQPGYS
GQKCETDIDDCKPNPCSNGGLCHDSINSFTCTCLPGFRGGRCEQDINECESNPCRNGANC
TDCVNSYTCTCPPGFSGINCEINTNDCTDSSCFNGGTCVDGINAFTCLCLPGFTSSYCQY
DINECDSKPCLNGGTCLDSYGTYKCTCPHGYTGINCQNLVRWCDSSPCKNGGSCWQQGAS
YTCQCQTGWTGLYCDIPSVSCEVAAKQQGVEVGQLCRNSGQCLDAGNTHYCRCQAGYTGS
YCQEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSKEINECQSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINLDDCNPSTDPLTNEPKCFNNGKCVDRIGGYQCVCTPGYV
GERCEGDVNECLSDPCDPRGSYNCIQLTNSYRCECRTGYTGQRCDKVFDGCKGRPCRNGG
TCAVASNTPHGFICKCPPGFTGSSCEYDSRSCGSLNCKNGGTCVSGHLGPRCLCPPAFTG
PECLTPTESLCISNPCYNGGTCQITPDAPFFQCSCPSNFNGLLCHILDYSFIGGFGRDIT
PPPEVEVSCEIPQCDEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYF
NDGKCDGQCNSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLADGHLVLVVHIPPEQLKNHSSAFLRDLSSVLHTNVIFRRDAKGEPMIFPYY
GNEQDLVKHNVLKRSADGWPEWASVPANVLGQVKDHVTAMVSPRKRRELDPVQVKGSVVY
LEIDNRQCYQQSTECFQSATDVAAFLGALASSGNLNVPYIEAVTSVRPTPSSSELYPMYV
VFLGLAALGFICLGVLVSRKRRREHGQLWFPEGFKASEPSKKKRREPLGEDSVGLKPMKN
SDINLMDDNQNEWDDEDPDCRRFRFEEQSMLDLSDHTDHRKWTQQHLDAADLRIPSIAPT
PPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDPSAEIISDFIYQGANL
HNQTDRTGETALHLAARYARSDAAKRLLESSADANVQDNMGRTPLHAAVAADAQGVFQIL
IRNRATDLDARMHDGTTPLILSARLAVEGMVEELINCHADANATDDSGKSALHWAAAVNN
VEAAMVLLKNGANKDMQDNKEETPLFLAAREGSYETAKVLLEHFANREITDHLDQLPRDI
AQERMHHDIVRLLDEYNVVRSPGLHNGPLSTSTLSPPLCSPNDYLSNLKPTLSGKKVRKI
NSAGKGGKDGGKDSRVKKKKSLDGKNNLLDTSAVLSPVDSLESPHGYLSDVASPPMTSPF
QQSPPMSLNHLQGNGDSLMGQMSMGKDMVCMSFDTNPPRLSHLPVSSPNSQGTASIVGSR
GGQCDWVSRMHPGVGQQGSFTQAPPMSHNMMGPLHGISTATLSQIMGYQNLQTSHLNSSA
HMMQQAHSRQLQHQNSNSTTAGQSLNQSFPNIEINGSDMQQNSVSGRSMSVHTVMPQETQ
ILGTQFLTPPSQHSYSGPMDNTPNHQLQVPDHPFLTPSPGSPDHWSSSSPHSNMSDWSEG
ISSPPTSIHSQMNLIPDQFK
NT seq
7443 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttctttgtgaaactgacatttctgatcaccgcagtcgtcttcacacaaggt
ctaaaatgctccgtgcccactgagtcgtgcctgaatggaggacgatgtgaacccacctcg
aatggaaatggagagtgcaagtgtcccagtgacttcgtaggcagccggtgccagtaccca
agtccctgcagcccttcaccttgccgcaacggtggcgaatgtcgtccggtttcccatggc
aacacatttgatttccgctgcgtgtgtcgcctgggtttcaccgaccgactgtgtctgacc
cccagcaaccatgcctgcatgagctctccctgtcgcaatggaggaacatgtgacctcatt
accctggctgcctaccgctgccgctgcccacctgggtggtcaggtaaaacatgccagctt
gccaacccgtgtgcttccaatccgtgtgcaaacggtggccagtgctcagcatttgattcc
acctacatctgcacatgcccgcctgcttttcacggtcaaacgtgcaagcaagacatcaac
gagtgcgctcaggctccctctccctgtcttaatggtggcatgtgtgtgaatgaggtgggt
tcgtaccactgccgctgccctacagagtactccggtaaacactgtgagacccggtacctg
ccatgcagcccctcaccatgcctgaacggaggcacctgtgtccagaagggagacaccatc
tatgactgtagctgcctgccaggcttcacgggtcaacattgtgagcacaacatcgatgat
tgtccaggccacaactgccagaatggtggtgtgtgtgtagatggtgtgaacacctacaac
tgccagtgcccgcctcattacacaggtcaatactgcacggaaaatgtggacgagtgtgag
ttgatgcccaatgcgtgtcagaatggagggacgtgccacgacactcacggcagctatcac
tgcgtctgtgttaacggttggactggcgacgactgcagcgaaaacatcgatgactgtgcc
agtgcagcttgttatcacggtgcgacctgccatgaccgcgtagcttcatttttctgcgag
tgtcctcatgggcgcacaggtttgctgtgccaccttgatgacgcctgcattagcaacccg
tgtcaaaagggctccaactgtgataccaatccggtcaatggcaaggcaatctgcacctgc
cccccaggttacactgggtcagcctgcaacctggacattgatgagtgctccctcggtgcc
aacccttgtgaacatggtggtcgctgcctcaacaccaaaggctctttccagtgcaagtgt
ctccaaggatatgagggtcctcgctgtgagatggacgtcaatgagtgcatgtctaaccct
tgccataacgatgccacctgtctggatcagattggcgggttccattgcatctgcatgcca
ggatatgagggagtgttctgccacatcaacgcagatgagtgtgccacccaaccttgtttc
aacaatggcaaatgcatcgataagatcaactcattccaatgcgagtgccccaaaggtttc
tctgggaatctgtgtcaggtggacattgacgagtgtgccagcactccctgtaaaaatgga
gctaaatgtacagatggtcccaacaagtacacctgtgaatgtgctgaagggtacacaggg
cagcactgtgagattgacatcaatgaatgctactctgacccctgccactatggcacctgt
aaggatggcttggcctcttttacttgccactgccacccaggctacactggccgtctgtgt
gagaccaacatcaacgagtgtctaagccagccctgcaagaatggtggtacctgccaggac
cgggagaacacttatatctgttcctgccctaaaggcacagcaggttttaactgcgaggtg
aatctggacgactgcaagagcaaaccctgtgactatgggcgatgcattgacaaaatcaac
ggctatgagtgtgcatgtgagccgggttacacaggatcaatgtgtaacatcaacatcgac
gagtgtgccattaatccctgtcacaatggcggcacctgtgtcgacggcatcaacaggttc
acctgcttgtgccctgagggctacaatgacgccacctgtttgtcccaggtggacgagtgt
ggcagcaacccctgcatccatggacggtgccaggacctcatcaatggctacaaatgtacc
tgtgactctggatggagcggaacaaactgcgacatcaataacaacgagtgcgagtccaac
ccgtgcatgaatggagggacttgcaaggacatgaccagcggataccactgcacatgcaga
gttggcttcaccggacctaactgccaaactaacatcaacgagtgtgcctccaacccctgc
ctcaaccagggcacctgcatcgatgatgtggctggatacaaatgcaactgcttgctgcct
tacactggtgataactgtgagaccttgctggcaccctgcaaccccagaccctgtaaaaat
gggggtgtgtgtaaggaggctgaagactaccagagcttctcctgcatctgtcctgaagga
tggcaaggtcaaacatgtgagatcgatatcaacgaatgtgtgaagggcccatgtcgcaat
ggagctatttgccataacactatgggtggctaccagtgcaagtgccagccaggttactct
ggccagaagtgtgagactgacattgacgactgcaaaccaaatccctgcagtaatggtggt
ttgtgccacgacagcatcaacagtttcacatgtacctgtctgcctgggttccgcggtggc
agatgtgagcaggacataaacgagtgcgagagtaacccctgtagaaatggagccaactgc
acagattgtgtcaacagctacacatgcacctgtccgcctggtttcagtggcatcaactgt
gagatcaacaccaacgactgcactgacagctcctgcttcaatggtggcacttgtgtggat
ggaatcaatgccttcacctgcctgtgtctccccggcttcaccagcagctactgccaatat
gatatcaacgagtgtgactccaaaccatgcctgaatggagggacttgtcttgacagttat
gggacttacaagtgcacctgtccccacggctacacaggaatcaattgtcagaatcttgta
cgctggtgtgactcttccccctgtaaaaacggaggatcgtgctggcagcagggagcctct
tatacctgtcagtgccagactggatggactggcctctactgtgacatccccagtgtgtcc
tgcgaggtagcagccaaacagcaaggtgtggaggtaggccagctgtgcagaaactcaggc
caatgtttggatgctggaaacacacattactgccgctgccaggccggctacactgggagc
tactgccaggagcaagtggacgaatgctcgcccaatccttgccagaatggagccacctgt
actgattatctgggaggttacagttgtgagtgtgtcgcgggctaccatggtgtaaactgc
tccaaagagatcaatgaatgtcagtctcagccgtgccagaatggaggcacctgcatcgac
ctcatcaacacatacaaatgctcttgtcccagaggaacacaaggtgtccactgtgagatt
aatttggacgactgcaacccctccactgacccactgaccaatgagcccaagtgtttcaac
aatggcaagtgcgtggaccgcattggcggctaccagtgtgtgtgcacgcccggatacgtc
ggcgagcgctgtgaaggcgacgtcaatgagtgtttgtcagatccatgtgaccccagaggc
tcatacaactgcattcagctcaccaacagctaccgctgcgagtgccgtactggctataca
ggtcagcgttgtgataaagtgttcgatggctgcaaaggaagaccctgcagaaatggaggc
acatgtgctgttgccagtaacacaccgcatggtttcatctgtaaatgtccacctggattc
actggctcttcttgtgagtacgattctcgttcctgtgggagtctgaattgcaagaacgga
ggtacatgtgtgtcaggtcacctcggcccacgctgcttgtgtccaccagccttcactggc
ccggagtgcctgacgcccactgagagcctctgcatctcgaacccgtgctacaatggtgga
acgtgccagatcacaccagacgctcctttcttccagtgcagctgtcccagcaatttcaac
ggcctgctgtgccacatcctggactattcatttattgggggctttggtcgggacatcact
ccacctccggaagtggaggtgagctgtgagattcctcagtgtgacgagtgggcggggaac
cacatctgtgactcgctctgcaacaaccatgcatgcggctgggacggaggagactgctcg
ctgaattttgacgatccgtggcaaaactgctcggctgctctgcagtgctggagatacttc
aatgatgggaaatgtgacggccagtgcaacagccctggttgcctttatgatggctttgac
tgccaaggacaggaaggtcaatgcaacccactttatgaccagtactgtaaagatcactac
gccgatggccactgtgaccaaggatgcaacaatgcagaatgtgaatgggatggtctggac
tgtgctaacaacatgccagagaagctggcagatgggcacttggttctggtggtccacatt
ccccctgaacaacttaaaaatcattcctcagccttcctcagagacctcagcagcgtcctc
cacaccaatgtgatcttccgtcgcgacgccaaaggtgaaccgatgatcttcccctactat
ggcaacgaacaggacctggtgaaacacaacgtgctgaagcgctctgcagatggttggcct
gagtgggcttccgtgccagccaatgttttgggtcaggtgaaggatcatgtgacagcaatg
gtcagcccacggaaacgcagagagctggaccctgtccaagtcaaagggtctgtggtgtac
ttggagattgacaaccgtcagtgttatcagcagtctactgagtgtttccagagtgccaca
gatgtagctgcattcctcggagccctggcctccagtgggaatctcaatgttccttatatt
gaagctgtcacaagtgtgagacccacgccctcctcatcagaactatacccaatgtatgtg
gtcttcctggggttggctgctttgggtttcatctgcctgggtgttcttgtgtctcgtaag
cggcgacgggagcacggccagctctggtttccagagggattcaaagcgtcagaacccagc
aaaaagaaacgcagagagcctttgggggaggattctgtcggactgaagcctatgaaaaac
tcagacatcaatcttatggatgacaatcaaaatgaatgggatgatgaagatccagactgt
agacgcttcaggtttgaggagcaatctatgttggatttgagtgaccacactgaccacagg
aaatggacacagcagcatctggatgcagctgacctacgtattccatccattgctcctaca
ccgcctcagggagagatagagaatgattgcatggatgttaatgtcagaggaccagatggt
tttactcccctgatgattgcctcctgcagcggtggaggactggaaactggaaacagtgaa
gaggaagaagatccctctgcagaaatcatctccgactttatttaccagggtgccaatctt
cacaaccagactgaccgcacgggtgagactgccctccacttggctgctcgctatgcccgc
tctgatgctgccaaacgcctcctggagtccagcgctgatgccaacgttcaagacaacatg
ggccgcactccacttcatgctgctgtggctgcagatgcacagggtgtcttccagatattg
atccgaaaccgtgccactgatcttgatgctcgcatgcacgatggaacaacaccgctgatt
ctgtctgcccgactcgcagtcgaaggcatggtggaagaacttatcaactgccacgctgat
gccaacgccacagatgattctggtaaatctgctcttcactgggccgctgctgtaaacaac
gtagaagctgccatggtgctgctgaaaaatggtgccaacaaagacatgcaagataacaag
gaggagacaccactcttccttgcggcccgtgaaggcagctatgagactgccaaggttctt
ctcgagcactttgccaaccgtgagatcaccgaccatcttgaccagctgcccagagacatc
gcacaggagcgcatgcatcacgacattgtccgcctcctggacgagtataatgtggttcgg
agtcctgggcttcacaacggccccctaagcacctccaccctctctccaccactctgctca
cccaatgactaccttagcaacctcaagcctaccctttctggcaagaaggtccgcaaaatt
aactccgcaggaaaaggagggaaggacggtggcaaggatagtagagtgaaaaagaaaaag
tctcttgatgggaagaataatttgctggacacatcagcggttctttccccagttgattcc
ctggagtcaccgcatggttatctgtcagatgtggcctctcctcccatgacatcacccttc
cagcagtctccgcctatgtctctcaatcacctacaaggcaatggagattctcttatgggc
cagatgagcatgggtaaggatatggtctgtatgtcctttgacacaaacccacctcgtctt
tcccacctgcctgtgtccagccccaatagtcagggcaccgcgtccatagttggaagcaga
ggaggccagtgtgactgggtttccaggatgcacccaggtgtgggccagcaaggaagcttc
acgcaagcaccccccatgtcccacaacatgatgggtcctctgcatggcatcagcacggcc
acactatctcagatcatgggctaccagaatctgcagaccagccacctcaactcatctgcg
cacatgatgcagcaggctcactcgcggcagctccagcaccagaactccaactccaccaca
gcaggccagtccctcaaccagagcttccccaacatcgagataaacggctccgacatgcag
caaaacagtgtttcaggccgctccatgtcagtccacactgtcatgccgcaggagacgcag
atccttggcacccagtttctcacccctccctcccagcacagctattccggccccatggac
aacacacctaaccaccagctacaggtccctgaccacccatttcttactccctcccctggc
tcccctgaccactggtccagctcgtccccacattccaacatgtccgattggtcagaggga
atctccagcccacctacaagtatccattcacagatgaatttgatcccagaccagtttaag
tag
DBGET
integrated database retrieval system
