KEGG   Solea senegalensis (Senegalese sole): 122758286
Entry
122758286         CDS       T07721                                 
Name
(RefSeq) polyubiquitin-C isoform X1
  KO
K08770  ubiquitin B/C
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03320  PPAR signaling pathway
ssen04120  Ubiquitin mediated proteolysis
ssen04137  Mitophagy - animal
ssen04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122758286
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    122758286
   04137 Mitophagy - animal
    122758286
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    122758286
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssen04121]
    122758286
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssen04147]
    122758286
Ubiquitin system [BR:ssen04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   122758286
Exosome [BR:ssen04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   122758286
  Exosomal proteins of other body fluids (saliva and urine)
   122758286
  Exosomal proteins of colorectal cancer cells
   122758286
  Exosomal proteins of bladder cancer cells
   122758286
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5
Other DBs
NCBI-GeneID: 122758286
NCBI-ProteinID: XP_043868265
LinkDB
Position
LG21:complement(2444604..2450901)
AA seq 761 aa
MQISVNTLTVKTIALEVEPSDAIKNVKKKIQDKEGIPADQQRLIFAGKQLEDGRTLSDYN
IQKDATLHLVLRLRGGMQIFVKTLTGKTITLEIELNDTIENVKAKIQDKEGIPQDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgcagatctctgtgaacaccctgactgtcaagaccatcgctctggaggtggagcccagt
gatgctattaagaacgtcaaaaagaagatccaggataaggaagggatccctgcagaccag
cagcgtctcatcttcgctggtaaacagctggaagacggtcgcaccctctctgactacaac
atccagaaggatgccaccctccatcttgtgctccgtctgagaggaggaatgcagatcttt
gtgaagaccctgactggcaagaccatcactctggagattgagctgaatgacaccattgag
aacgtcaaggccaaaatccaggacaaagaaggaatccctcaagaccagcagcgtctcatc
tttgctggtaaacagctggaagatggtcgcaccctctccgactataacatccagaaggag
tccaccctccatcttgtgctccgtctgagaggaggtatgcagatctttgtgaagaccctg
accggcaagaccatcactctggaggttgaacccagtgataccattgagaacgtcaaggcc
aaaatccaggataaagaaggaatccctccagaccagcagcgtctcatcttcgctggtaaa
cagctggaagatggtcgcaccctctccgactacaacatccagaaggagtccaccctccat
cttgtcctgcgtctgagaggaggtatgcagatctttgtgaagaccctgaccggcaagacc
atcactctggaggtggagcccagtgataccattgagaatgtcaaggccaaaatccaggat
aaagaaggaatccctccagaccagcagcgtctcatctttgctggtaaacagctggaagat
ggtcgcaccctctccgactacaacatccagaaggagtccaccctccatcttgtcctgcgt
ctgagaggaggtatgcagatctttgtgaagaccctgactggcaagaccatcactctggag
gtggagcccagtgataccattgagaatgtcaaggccaaaatccaggataaagaaggaatc
cctccagaccagcagcgtctcatctttgctggtaaacagctggaagatggtcgcaccctc
tccgactacaacatccagaaggagtccaccctccatcttgtgctccgtctgagaggaggt
atgcagatctttgtgaagaccctgaccggcaagaccatcactctggaggttgaacccagt
gacaccattgagaatgtcaaggccaaaatccaggataaggaaggaatccctccagaccag
cagcgtctcatcttcgctggtaaacagctggaagatggtcgcaccctctccgactacaac
atccagaaggagtccaccctccatcttgtcctgcgtctgagaggaggtatgcagatcttt
gtgaagaccctgactggcaagaccatcactctggaggtggagcccagtgataccattgag
aatgtcaaggccaaaatccaggataaagaaggaatccctccagaccagcagcgtctcatc
tttgctggtaaacagctggaagatggtcgcaccctctccgactacaacatccagaaggag
tccaccctccatcttgtcctgcgtctgagaggaggtatgcagatctttgtgaagaccctg
accggcaagaccatcactctggaggttgaacccagtgataccattgagaacgtcaaggcc
aaaatccaggataaggaaggaatccctccagaccagcagcgtctcatcttcgctggtaaa
cagctggaagatggtcgcaccctctccgactacaacatccagaaggagtccaccctccat
cttgtgctgcgtctgagaggaggtatgcagatctttgtgaagaccctgactggcaagacc
atcactctggaggtggagcccagtgataccattgagaatgtcaaggccaaaatccaggat
aaagaaggaatccctccagaccagcagcgtctcatcttcgctggtaaacagctggaagat
ggtcgcaccctctccgactacaacatccagaaggagtccaccctccatcttgtcctgcgt
ctgagaggaggtatgcagatctttgtgaagaccctgaccggcaagaccatcactctggag
gttgaacccagtgacaccattgagaacgtcaaggccaaaatccaggataaggaaggaatc
cctccagaccagcagcgtctcatcttcgctggtaaacagctggaagatggtcgcaccctc
tccgactacaacatccagaaggagtccaccctccatcttgtgctccgtctgagaggagga
aactag

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