Solea senegalensis (Senegalese sole): 122758286
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Entry
122758286 CDS
T07721
Name
(RefSeq) polyubiquitin-C isoform X1
KO
K08770
ubiquitin C
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03320
PPAR signaling pathway
ssen04120
Ubiquitin mediated proteolysis
ssen04137
Mitophagy - animal
ssen04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122758286
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122758286
04137 Mitophagy - animal
122758286
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
122758286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122758286
Ubiquitin system [BR:
ssen04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
122758286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Dsc3_N
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
122758286
NCBI-ProteinID:
XP_043868265
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Position
LG21:complement(2444604..2450901)
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AA seq
761 aa
AA seq
DB search
MQISVNTLTVKTIALEVEPSDAIKNVKKKIQDKEGIPADQQRLIFAGKQLEDGRTLSDYN
IQKDATLHLVLRLRGGMQIFVKTLTGKTITLEIELNDTIENVKAKIQDKEGIPQDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctctgtgaacaccctgactgtcaagaccatcgctctggaggtggagcccagt
gatgctattaagaacgtcaaaaagaagatccaggataaggaagggatccctgcagaccag
cagcgtctcatcttcgctggtaaacagctggaagacggtcgcaccctctctgactacaac
atccagaaggatgccaccctccatcttgtgctccgtctgagaggaggaatgcagatcttt
gtgaagaccctgactggcaagaccatcactctggagattgagctgaatgacaccattgag
aacgtcaaggccaaaatccaggacaaagaaggaatccctcaagaccagcagcgtctcatc
tttgctggtaaacagctggaagatggtcgcaccctctccgactataacatccagaaggag
tccaccctccatcttgtgctccgtctgagaggaggtatgcagatctttgtgaagaccctg
accggcaagaccatcactctggaggttgaacccagtgataccattgagaacgtcaaggcc
aaaatccaggataaagaaggaatccctccagaccagcagcgtctcatcttcgctggtaaa
cagctggaagatggtcgcaccctctccgactacaacatccagaaggagtccaccctccat
cttgtcctgcgtctgagaggaggtatgcagatctttgtgaagaccctgaccggcaagacc
atcactctggaggtggagcccagtgataccattgagaatgtcaaggccaaaatccaggat
aaagaaggaatccctccagaccagcagcgtctcatctttgctggtaaacagctggaagat
ggtcgcaccctctccgactacaacatccagaaggagtccaccctccatcttgtcctgcgt
ctgagaggaggtatgcagatctttgtgaagaccctgactggcaagaccatcactctggag
gtggagcccagtgataccattgagaatgtcaaggccaaaatccaggataaagaaggaatc
cctccagaccagcagcgtctcatctttgctggtaaacagctggaagatggtcgcaccctc
tccgactacaacatccagaaggagtccaccctccatcttgtgctccgtctgagaggaggt
atgcagatctttgtgaagaccctgaccggcaagaccatcactctggaggttgaacccagt
gacaccattgagaatgtcaaggccaaaatccaggataaggaaggaatccctccagaccag
cagcgtctcatcttcgctggtaaacagctggaagatggtcgcaccctctccgactacaac
atccagaaggagtccaccctccatcttgtcctgcgtctgagaggaggtatgcagatcttt
gtgaagaccctgactggcaagaccatcactctggaggtggagcccagtgataccattgag
aatgtcaaggccaaaatccaggataaagaaggaatccctccagaccagcagcgtctcatc
tttgctggtaaacagctggaagatggtcgcaccctctccgactacaacatccagaaggag
tccaccctccatcttgtcctgcgtctgagaggaggtatgcagatctttgtgaagaccctg
accggcaagaccatcactctggaggttgaacccagtgataccattgagaacgtcaaggcc
aaaatccaggataaggaaggaatccctccagaccagcagcgtctcatcttcgctggtaaa
cagctggaagatggtcgcaccctctccgactacaacatccagaaggagtccaccctccat
cttgtgctgcgtctgagaggaggtatgcagatctttgtgaagaccctgactggcaagacc
atcactctggaggtggagcccagtgataccattgagaatgtcaaggccaaaatccaggat
aaagaaggaatccctccagaccagcagcgtctcatcttcgctggtaaacagctggaagat
ggtcgcaccctctccgactacaacatccagaaggagtccaccctccatcttgtcctgcgt
ctgagaggaggtatgcagatctttgtgaagaccctgaccggcaagaccatcactctggag
gttgaacccagtgacaccattgagaacgtcaaggccaaaatccaggataaggaaggaatc
cctccagaccagcagcgtctcatcttcgctggtaaacagctggaagatggtcgcaccctc
tccgactacaacatccagaaggagtccaccctccatcttgtgctccgtctgagaggagga
aactag
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