Solea senegalensis (Senegalese sole): 122758355
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Entry
122758355 CDS
T07721
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03082
ATP-dependent chromatin remodeling
ssen03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122758355
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122758355
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssen01009
]
122758355
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122758355
03036 Chromosome and associated proteins [BR:
ssen03036
]
122758355
Protein phosphatases and associated proteins [BR:
ssen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122758355
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122758355
SWI/SNF complex
122758355
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122758355
PBAF complex
122758355
SWI/SNF complex
122758355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
122758355
NCBI-ProteinID:
XP_043868410
LinkDB
All DBs
Position
LG21:2783869..2791279
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AA seq
368 aa
AA seq
DB search
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVDERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRLGRDRKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPADSILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggctttaagtaaaacgttcggtcagaagccagtgaaatttcagttggaacaa
gatggggatttttacatggttggatcggaggttggaaactatttacgcatgttcagaggc
tctttgtataagagatacccatctttatggaggaggctggcgtctgtggatgaacggaaa
aaaattgtggcatcatcacacgccacgagtgttaccctgctgaaggcatcagaatgtgaa
gagatctttgagggcaatgacgagaagtacaaggcagtgtccatcagcacagagccccca
gcttacctcagagagcagaaagcaaagaggagcagtcagtgggtccccacgcttcccaac
agctctcaccatctagatgctgtgccttgctccaccacgatcaaccgcaacagattgggt
cgtgacaggaagaggaccttccccttgtgctttgatgaccatgaccctgcagtgatccat
gagaacgcagcccaggtcgaggctctggttcccattcgtcttgacatggagatcgatgga
cagaaactgcgagatgccttcacatggaacatgaatgagaaactcatgaccccagagatg
tttgcggagattttgtgtgatgacctggacctgaatcctctggcctttgttcctgccatt
gcctcagccattcgtcagcagattgagtcctaccccgctgacagcatactagaagagcag
gcagaccagagagtcatcatcaagctgaacatccatgtggggaatatctcgctagtggac
cagtttgaatgggacatgtcagagagggaaaactccccggagtcatttgcgctgaagctt
tgctctgagctgggtttgggaggagagtttgtgaccactatcgcctacagcattcgaggt
caactcagctggcaccagaggacgtatgccttcagtgagaatccactccccacagtagag
atcgccatccgcaatactggagatgcggaccaatggtgccccctgctggagactctcaca
gatgctgaaatggagaagaagatccgagaccaagacaggaacacaaggcgtatgaggaga
ctggccaacactgctccatcatggtag
DBGET
integrated database retrieval system
