Solea senegalensis (Senegalese sole): 122758409
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Entry
122758409 CDS
T07721
Symbol
dhx29
Name
(RefSeq) ATP-dependent RNA helicase DHX29
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ssen03012
]
122758409 (dhx29)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122758409 (dhx29)
Translation factors [BR:
ssen03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122758409 (dhx29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_DHX29
OB_NTP_bind
Helicase_C
DEAD
HA2_C
DSRM_DHX29
AAA_22
nSTAND3
HA2_N
nSTAND1
AAA_16
Motif
Other DBs
NCBI-GeneID:
122758409
NCBI-ProteinID:
XP_043868515
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All DBs
Position
LG21:complement(8277582..8287667)
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AA seq
1384 aa
AA seq
DB search
MGGKKKKSAAPVAPAVAAAAQGRSGAAAAVNSVAEEPKKQPANIKPAKPAKENKSKAPKT
YSLANTAQVDTGGVSDKSILKVTIQADLEKKIIKLINDFRQENGDKEHVSGRLTSKKLLD
LYTALQKFNFKREHIEEAMKSSVLYGGDLHSALDWLCLNLKDDELPEGFSQQMQEESQKS
RPRYQPPAQQTPATPSPKAPNNIHKEPSKAPEKDEAASVKDWILRYAEQSSDEDNGEEEE
EDREKKRGHNPELEEKFDPNDRYLVLTAQLYDTKEMATAAKTKCDKLGQRTAQDRIRIIQ
QEMKQLEAHPVFNPAIKVVDMPQREKKTVPVSEGKEDITFNLFERAEKEPPAEKAVKKNE
PKDIRNFDYTARSWTGKSPKQFLIDWVRKNLPKSPAPAFHKVPAGRYWKCKVRIQRIEDV
LEVCPTILTEDSMQAQHLAATLALYTLVKGQSVHQLLPPTYRDVWLEWRDGDQQRQEENR
TAANKPRDQFISRLLTRLKQQQSQSQEQGSGSQDQAVLDHSGDDEPEESWENLASLDIRD
GGEDLEDKSEKSGCRREEEGALRAGRELLLKLKKSPLALKLLAEREQLPVFQHRRRVLEA
LQRHPVVVVAGETGSGKSTQIPQFLLEELLTGGKAAQPCNIVVTQPRRISAMSLACRVTQ
ELGCEDGPGSKSSLCGYQIRMENLSGEWTRLLYCTTGVLLRKLQHDRHLSSLTHIIVDEV
HERSVQSDFLLTILKDVVMRRSDLQLILMSATVDCDKFSNYFNRCPVINIPGRTFPVEVF
HLEDIVEQTGYALEKDSEYCQKILEEEEEVSISITQKGGRTLQHQEVIVRDSSGWDLGPD
LDHFSSRTRQVLQYMNPNKINMDLLVDLLDYLDKSPQFAVLDGAVLVFLPGLAHIQQLHD
LLTSDKRFREKNRYRIVALHSTLSSKDQAAAFTVPPAGVRKIVLSTNIAETGVTIPDVVF
VIDTGKTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRNGFCFRLYPKFRFDAFMD
YSIPEILRVPLEELCLHIMKCQYGSPEDFLSRALDAPQPQSVSNAVNLLRKIGACHLTNH
LLTPLGHHLASLPVNVKIGKMLIYGAILGCLQPIATIAAAIAEKSPFSTPMNRKDEANLA
KAALALANSDHLTIYNAYVGWKNSQTEGPRAEMSYCRKHFLNRTALMTIEDVRHELMKMM
EQAGFWSPRSSSRSKTPQVAPLSKQQITVLNAALTAGLYDSVARVLCTPSVDVLERLACT
VETPQGKAQVHPSSVNRNLQTHGWLLYQEKVKYTKIYLRDTTLISPFPMLLFGGDIDIQH
RERLITLDGWIHFQAPVRIGVIFKHLRKLMDSLLERKLENPRMNLEGEGTIQMILDLIKS
EHAL
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaaaaaagaagaaatcggcagctccggtggccccggctgtggcggcagcagca
cagggcaggagcggtgcagctgcagcggtgaacagcgtggcggaggagccgaagaagcaa
ccagccaacatcaagccggctaaaccagccaaagaaaacaagtcaaaggctccaaagacc
tacagccttgcaaacactgcacaagtggacacaggtggagtctcggacaagtccattctg
aaagtcactatccaagctgacttagagaagaagatcatcaagctgatcaatgatttcaga
caggagaatggggacaaagagcatgtatcaggcagacttacaagcaagaaactgctggac
ctgtacacagctctacagaagttcaacttcaagagagagcacattgaggaggcgatgaag
agcagtgtgctctatggaggggatctccactctgctcttgactggctctgtctcaacctt
aaagatgatgagctgcccgaaggttttagccagcagatgcaggaggaaagccagaagagc
aggcccaggtaccagcctcctgctcaacaaacacctgccaccccaagccccaaagcaccc
aacaatatacacaaagagcccagcaaggccccagaaaaggacgaggctgcaagcgtaaag
gactggatcttaaggtatgcggaacagagcagtgatgaagataatggtgaggaggaagag
gaagatagagagaagaagagggggcacaatcctgagctggaggaaaagtttgacccaaac
gaccgctatttggtcctcaccgctcagctgtatgacactaaagaaatggcgaccgctgcc
aagaccaaatgtgacaagttgggccaaaggacggcacaggacaggatacgcatcatacag
caagaaatgaagcagctggaagcccaccccgtgttcaatccagctataaaggtggtggat
atgccgcagagggaaaagaaaacagttccagtcagtgagggcaaagaggacatcaccttt
aatctgtttgaacgagctgaaaaggagcctcccgctgagaaagctgtgaagaagaacgag
ccaaaggacattcgtaattttgactatacagctcgcagctggactggaaagtctcccaaa
cagttcctcattgactgggtccgaaagaacctgcccaagagtccggcaccagctttccac
aaggttcctgctgggagatactggaaatgcaaagtgcgtattcagaggatagaagatgtt
ctggaggtttgtcccaccattctgactgaggacagcatgcaagctcaacatctggcagcc
acactggcgctctacaccctggttaaaggacagtcggtgcaccagctgcttcctccaacc
tacagagatgtatggttggagtggagagacggcgaccagcagcgacaggaggagaaccgc
actgccgcaaacaaacctcgagatcagttcatctcccggctcctgacccgactcaaacag
cagcagagccagagccaagagcaagggtcaggatcccaagaccaggctgtgctggaccat
agtggagatgacgagcccgaagagtcctgggagaacctggctagtcttgatatcagggat
ggaggagaagatctggaagacaagagtgagaaaagcgggtgcaggagggaagaggaggga
gcactcagggcaggaagagagcttttactgaagctgaagaagtcaccactcgccctcaaa
ctgctggcagagcgagagcagcttcctgtcttccaacaccgccgtcgtgtcctggaggct
ctacagcgccaccctgtggtggtggtggctggcgagacgggcagtgggaagagtacacag
attcctcagttcctgctggaggagctgttgactgggggcaaagcagcacagccctgcaac
atcgtggtgactcagcctcgcaggatatctgccatgagtctggcctgcagagtcactcag
gagcttgggtgtgaggatggacccggatctaagtcgtcgttgtgcggataccagatccgc
atggagaacctgtccggggagtggacccgtctgctctactgtacgactggagttctgctg
aggaagctgcagcacgacagacacctgagttcactgactcacatcatcgtagacgaggtc
catgagcgcagtgtgcagtcagacttcctgctgaccatcctgaaagacgttgttatgagg
agatcggacctgcagctgattctcatgagcgccacagtcgactgtgacaagttctccaac
tacttcaaccgctgcccagtgatcaatattcccggcaggacgttcccagtcgaggtgttt
catcttgaagacatcgtggagcagacaggctacgccctggaaaaggactccgagtactgt
cagaaaattctggaagaagaggaagaagtcagcatctctatcacacaaaaaggcggcagg
acattacaacaccaggaggtgatagtaagggactcctcaggctgggacctgggtcctgac
ctcgaccactttagcagcagaacacggcaggtgttgcaatacatgaaccccaataagatc
aacatggacttgctggttgacctcttagactatctagacaaatccccacaatttgcagtt
ttggatggagccgttctcgtgttccttccagggttggcccatatccagcagctgcacgac
ctcctcacgtcagacaagaggttcagggagaaaaacaggtacaggattgtagctctccac
tcgacactttcatccaaagaccaggcggctgccttcacagtgccccctgctggagtcagg
aagattgtgttgtctactaacatcgctgagacaggtgtgactatccctgatgttgtgttt
gtcatagacactgggaagaccaaagaaaacaagtaccacgagagcagccagatgagttct
ctggtggaaacatttgtttccaaagccagcgccctccagaggcaggggagagcaggacgt
gtccgtaacggcttctgcttcagactctacccaaaattcaggtttgatgccttcatggat
tattccataccagagatactacgggtcccactggaggagctctgcctccatatcatgaaa
tgccagtatggttccccggaggatttcctgagccgggccctcgatgctcctcagccacag
tcggtcagtaatgctgtcaacctgctgaggaagataggtgcgtgtcacctcaccaaccac
ctcctcactcctctgggacaccacctggcgagtctgcctgttaacgtgaagatcggcaaa
atgctgatttacggagccatcctcggctgcctgcagcccatagcaaccattgcagcagcc
atcgctgagaagtctcccttctccacaccgatgaatagaaaggatgaagctaacttggcc
aaagctgcactggcattagcaaactctgatcacctgactatctacaatgcatatgtgggg
tggaagaactcacagactgaaggaccaagagcagaaatgtcttactgtaggaagcacttc
ctcaacagaacagctctcatgacaatagaggatgtgaggcatgagctgatgaagatgatg
gagcaggcaggtttctggtcacctcgctcctcctctcgctctaagaccccgcaggtggcc
ccgctgtccaagcagcagatcacagtcttgaacgcagcgctgacggcggggctctacgac
agcgtggctcgggtcttgtgcacaccctctgtggatgtgctcgagcgactggcctgcacg
gtggagacgcctcaaggcaaagcgcaagtccatccgtcatccgtgaaccgcaacctgcag
acccacggctggctgctgtaccaggagaaggtgaaatacaccaagatctacctgcgagac
accactctgatatctccatttccaatgctgctctttggaggtgacattgatattcagcac
agagagagactcatcacacttgacggatggatacacttccaggctcccgttcgcattggt
gtgatcttcaaacacctgaggaagctgatggactctctgctcgaaaggaagctggagaat
ccgaggatgaatctggaaggtgaggggaccatccagatgattttggatctgatcaaatcc
gagcatgctctgtga
DBGET
integrated database retrieval system
