Solea senegalensis (Senegalese sole): 122758658
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Entry
122758658 CDS
T07721
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssen00535
]
122758658
04091 Lectins [BR:
ssen04091
]
122758658
Proteoglycans [BR:
ssen00535
]
Cell surface proteoglycans
Others
122758658
Lectins [BR:
ssen04091
]
C-Type lectins
Others
122758658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Cadherin_4
ASFV_J13L
7tm_3
DUF4381
Motif
Other DBs
NCBI-GeneID:
122758658
NCBI-ProteinID:
XP_043868863
LinkDB
All DBs
Position
LG21:16856939..16865359
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AA seq
1480 aa
AA seq
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MISLYLAWDLEQKKVLFVHRGVSFGRFVLFVSDGKHYVSTLLEVMAQDPYLQVENNTGLL
VQQGGDTTLTSANLSIFSNLDIRDPEEVTFDVFRPPKHGFLCFNDGDCDTAKGADAIKSF
TQRDLVEGRLAYRHDGSQELSDWFNVTARAGEKSTDRRVDRGRREVQVDVGVLVKIYLES
HQREPTVISNRPVVVPEGQNVSISREHLEVVHEDSQPSEIIFTVQSPPALGFLQRSSPFN
QHQIVHREQQFSQGIREQQMTFTQNDVNQGLIVYHQQATGCTNDSVLLEATNGVTKVGPI
ELEIDIIPILLPLQVSDLMLDEGSSLPLTSDIIKVANHHFSGMNFLYQVLVPPRHGHLEH
SRIPGMPITAFTHTEVEREYISYIHDGSDTQADNFTIVANQTEISKHSLPCTVHISITPV
NDESPVVTNNRGLKVWVGSVTEITLEDLSAEDPDTSSEGLEFVVTPPSNGHLALKSAPSR
HILNFTQSHIQSGQLVFVHSGALTGGFHFQVNDGVNFAPRQIFSTTARSLVLTLQRNHPM
EVYPGSVTLISEQELQVVTNGDSDNRRNHSVVFAVTTPPKLGRLLRRMPDNSTQNISTFT
QSMVNDGVILYEQNKPETVGWSAVDSFSFTVSSPPAFLPPNTFTLLISFLANKHHDNPQH
NTRLLNNAGAVVAEGGRVTIDRSKLDASNLLRKVPEPRRKDTHIQYRVVSLPQHGVLSIR
GYNITRDTPDFTQITLNKFGVTYVHDDSETTSDSFTFQAWVAPLDRSSSSSLSSSSSSST
SLSASSSSAPYSFSPLYSASSSSFSSPGTASRPQIKDGLVVTETFNITVTPVNDQPPLIR
SRSPSMKVVIGERVILGPDYLQVEDHDTPPEELHYLVISKPNNGYLTLGERPEPVTSFTQ
YDVNHGRLHFTQQGEASTGVIYFNVTDGHHRPLYKLFSLEVIKPSVSIVNNTGLSLVQGR
TAVVLSTTQLAAQTNGRSQANITYTVTTHPRHGRIVINDQEVATFCHEDLQFGRVVYHMT
DLSESEDMFQISVSASSPGVDYGNVTAQTVEVTVRPLVYLREPVRVPSGIAVKLGKAMID
ASELARISRADPVFEVLSPPKHGKLVKMTYDPNRASEVLKSFTFRDVVQGRVAIEESLSD
GDNQLHGNKTALTTARGHTPARPLNDSFIFLVKAGTVQPAKGELHFTIFPHHQMRHGASG
LSKEDGASHKRATTRLPTHNKTTSGGGRVSGRGGSTTQSGTEVGLHPHILSHKNHNRTQH
RSRPHSRWGNHTRGGSHGGRSASPAEGAGGHTQQPHSPPDKHGPMIHPDNHPVHFEVVPR
PASDPLLIILPLLACLLLIIILVVLILVFRHRKEKQARLRLIQELAAVALPPEDSPYLGR
PERSMAMPSVVVTPLGPASCPASPKIQLMPKRRRQSLAPGMTFWGPIDPDGRGGHGNIRV
GANNERDNAICRNVPPAVTAGFKTSVRARSPTLKHNQYWV
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgatttctctctatttggcctgggaccttgagcagaaaaaggtgttatttgtccacaga
ggagtgagtttcgggcgttttgtgctttttgtgtcagatgggaaacattatgtgtccact
ctgctggaggtaatggcccaggatccttacctgcaagtggagaacaacaccggcctcttg
gtacagcaaggtggtgacacgaccttgacctccgctaacctcagcatcttcagcaacctt
gacatccgagatccagaggaagtgacgttcgacgtcttccgtccgcctaaacacggtttc
ctctgcttcaatgacggcgactgtgacactgcaaaaggagcagatgcaattaaaagcttc
acccagcgggacctggtggaagggcgtttggcatatcgccacgacggcagccaggaattg
tcagattggttcaatgtgacggcacgagcaggggaaaagagcacagataggcgagtggac
agagggaggagggaggtccaagtggacgtcggagtgctggtaaagatctacctggagagt
catcagagggagccaacggtcataagtaaccgtccagttgtggtgccagaaggacagaat
gtttccatcagcagggaacatttagaggtggtccatgaggacagccaaccttctgagata
attttcactgtacaaagtcctcccgccctgggctttcttcagagatcctcccccttcaac
cagcaccagatcgtccatagagaacagcagttctctcagggcatcagagagcagcagatg
accttcacccagaatgacgtgaaccagggattgattgtctatcatcaacaggccacagga
tgcaccaatgactctgttctgttggaggcaaccaatggagtcacaaaggttggacccatt
gagctggagatcgatattattcccatcctgctccctctacaggtgtctgatttgatgctt
gacgaggggtcatccctgccactcaccagtgacatcatcaaggtcgccaatcaccacttc
tcaggcatgaacttcctgtatcaagtcctcgtcccaccacggcatggacacctggagcac
agccggataccggggatgcccatcactgctttcacacacactgaggtggaacgcgagtac
atctcctacatccatgatggcagcgacacacaggcggacaacttcactattgttgccaat
cagacggaaatcagcaaacacagtttgccctgcacagttcacatcagcatcacgccggtc
aatgacgagtctcctgtcgttacaaacaaccggggtctgaaggtgtgggtgggttcggtg
actgaaatcaccttagaagatcttagtgcagaggaccctgacacttcctctgaggggctg
gagtttgtggtcacaccacccagcaacgggcaccttgctctgaagagcgccccctccaga
cacatcctgaatttcacccagagtcacatacaaagtggacaactggtgtttgtgcacagt
ggtgcgttgactggaggctttcacttccaggtaaatgatggtgtcaactttgcccctcgt
cagatctttagcaccactgcacgatctctggtcctcactctgcagagaaaccatccaatg
gaggtctacccaggctctgtgacgctgatctccgagcaggagcttcaggtggtaaccaac
ggcgacagcgataacagaaggaaccactctgtggtgtttgcagtgaccactcctcctaaa
ctcggccgcctgctccgacgcatgcctgacaactcaacgcaaaacatttccacattcaca
caaagcatggtgaatgatggggttatcctgtacgaacagaacaagccagagacagtcgga
tggtcggctgtagattccttctctttcactgtgtcctctcctcctgctttccttccgcca
aacaccttcaccctcttaatctccttcctggctaacaagcatcatgacaaccctcaacac
aacaccagactactgaacaatgcaggtgctgtggtggcagaggggggcagggttacgatt
gacaggtccaaactcgatgcctccaatctcctgaggaaagtcccagagcctcgacggaaa
gacactcacatccagtaccgtgtcgtttctctgccacagcacggagtcctgtccatacga
ggatataatatcaccagagacacaccagatttcacacagatcaccctgaataagttcggc
gtcacctatgtccacgacgactctgagacgacgagcgacagcttcacgttccaggcttgg
gtggctcctctggatcgctcctcctcctcttccttatcctcttcctcttcctcctcaacg
tccttgtcggcgtcttcctcctccgccccgtactccttctcccctctctattcagcctcg
tcgtcctccttttcgtcgccagggacggcttctcgtccccaaatcaaagacggcctggtg
gtgacggagacgttcaacatcaccgtgacgccagtcaacgatcagccgccgcttatcagg
agcagatccccgagtatgaaggtggtgattggagagagagtcatacttggcccggactat
ttgcaggttgaggatcacgacacgcctccagaggagctgcactaccttgtgatcagtaaa
cccaacaatggttacctgacgctgggcgaaagaccagagcctgtgacgtccttcacccag
tatgacgtcaaccatgggcggctgcatttcacacagcagggcgaggcctcgacaggtgtc
atctacttcaatgtcactgacggccatcaccgccccctctacaaactcttcagtttggag
gtgatcaagccgtctgtctccatcgtgaacaacaccggcctgtcactggtacaaggcagg
accgccgtggtcctctcgaccacccagctggcagctcagaccaacggtcgcagccaggcc
aacatcacctacaccgtcaccacgcaccctcgccacgggcgcatcgttataaacgaccag
gaggtcgcaaccttctgccacgaggacctgcagtttggccgcgtggtctaccacatgacg
gatctcagcgagtcagaggacatgttccaaatctccgtgtcggcctcgtcgcctggtgtg
gactatgggaacgtaacggcacagacggtggaggtaacggtgcggccgttggtctacctg
agggagccggtgcgggtacccagtggtatcgctgtgaagctggggaaagccatgatcgac
gcgtccgagctggcgagaatcagccgagctgacccagtctttgaggttctgtctccaccg
aaacatggaaaactagtcaagatgacgtatgacccaaaccgagcatcagaagtcctgaag
tcgttcacgtttagagatgtggtgcaaggacgagtcgccatcgaggagtcgctcagcgac
ggtgacaaccagctccacggcaacaaaacggcgctcacgacggctcgaggccacaccccc
gccagacctctcaatgactccttcatcttcctagtgaaggctggaaccgtgcagccggcg
aagggcgagcttcacttcaccatctttccccaccaccagatgcgtcacggtgcgagtggt
ttgagcaaagaagacggcgcgagtcacaaacgcgccacgacccgtctgccgacacataac
aagacaacgtccggaggcgggagagtgagtggacgagggggatccacgacccagagcggc
actgaggtgggtttgcatccgcacattttgtcacataaaaaccacaacaggacacagcac
aggtcgaggcctcacagccgttgggggaaccatacgcgcggcggaagccacggcgggaga
tcggcgagccccgcagagggagctggaggtcacactcaacaaccccactctcctccagac
aaacatggcccgatgatccatcctgacaaccacccggttcacttcgaggtcgtccctcgt
cctgcctctgacccgctcctcatcatcctgcctctgctggcctgtttgctcctcatcatt
attctcgtggttttgattctcgtgttccgccaccgaaaggagaaacaggcccggctgcgg
ctcatccaggagctggctgcggtagcgttaccccctgaggacagtccttacctgggccgg
ccggagcggagcatggcgatgccatctgtggtggtgaccccactcggccctgcaagctgc
cccgcctcaccgaagatacaactaatgcctaagaggaggaggcagagtctggcccctgga
atgaccttctggggaccgattgaccctgatggaagaggaggccatgggaatattcgagtt
ggtgccaataacgaacgagataatgcgatttgtcgtaacgtacccccagctgttactgca
ggcttcaagacctcggtgagagccaggtccccgactcttaaacacaaccagtactgggtc
tga
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