Solea senegalensis (Senegalese sole): 122758712
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Entry
122758712 CDS
T07721
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssen00535
]
122758712
04091 Lectins [BR:
ssen04091
]
122758712
Proteoglycans [BR:
ssen00535
]
Cell surface proteoglycans
Others
122758712
Lectins [BR:
ssen04091
]
C-Type lectins
Others
122758712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
122758712
NCBI-ProteinID:
XP_043868938
LinkDB
All DBs
Position
LG21:14400348..14415807
Genome browser
AA seq
2566 aa
AA seq
DB search
MGRLVAELFLFLLISTGQVNAVSFYGDGYIHLRTVESSFQNLLHVRFRTSSQAGLLFLAA
GHRDFLLLELISGHLQVRLDLGSGEHLLRSQKGINLSDLGWHSMELIHDQHNVTMTVDQN
SVTTLHMPGPDVELLVEVGVFVGGAVGLNYPYLLNISTGFRGCVEEVVFNEHNLLSSLRR
YSGYKSVHEVSLGCNMQFSATEEEPISFFSSKAFVSLPPWEVPQEGVFECELHPSARQDN
GMVLYSSGNQGVFVAIEIIEGHLVATIGHGEGSKVELRSLTNVFSNHTWYSIKLHLLPHS
IQIKLDKELIKTNLSLELQIIQLEGPLFLGGLNEEARVEAARAGLLSALSGGGSFKGCLR
EIKVNNQRTGIPHAVVTKDITVGCRVGQAIVVLTNNSSTISPEFNITTPKPTINKRNPNF
LFLRKLEVEEGGRAPLEPKHIKVNLDFRKLGIHPSQFKFHIEEQPVHGQLRLDLSPDADG
IQDEGKEGTIVLGTEEKDRTFSMLDLWQGRVMYVHSGSEDQSDFFIFSVFSTKKQPPVLQ
RGIRLHRFDIIISPVNDAPVLSLPEGNLFTLLEKSKRQLTADMLRVLDPDSSPAELVFSS
LGDLHTEAGHLEHEDYPNRAINLFSLHDLEDGKISFVHSGVSTARLPLRVSDGQKSSNTV
ILRIMAVPLEHKLVNNTGLEVNQGEASIITTSHLAVQVNVSGQAVEIRYDMTESPQYGEL
QRLHSSGEWKVTTSFSQKLLEKERIRYLSTYRGLQTQNNITDQFKCKVSINSNATEEVVF
PVMVRWIHFKVTRSKMEVNSVQPAVVTPENLHVVSKGVRLNESNLHFILLTAPKKGRLLL
EDKVLLKNSTFSQKNITDGLVKYELYNRLTDDTRDTFRFRVFSAHASSTSYDFRINIKNE
STAITIVNEGLTILEGGSKVITKDILFTNTASNREVKYTVTKSPMHGQIRKINLSNSSSI
NDNVVLFTNRDIMEERIMYVHDDSETKQDSFTFQIMVNKPHKHTSKKEERHTAEQAFNIS
VQLVNDQRPARVVDKVFHVARDSQRLVTLNDICYRDDDSDFEDSWLVYTRRGIPMGDLVL
ASNPSHKLYEFTQRDLEQKKVLFVHRGVSFGRFVLFVSDGKHYVSTLLEVMAQDPYLEVE
NNTGLLVQQGGVTTLTSANLSIFSNLDIRDPEEVTFDVFRPPKHGFLCFNDGDCDTAKGA
DAIKSFTQRDLVEGRLAYRHDGSQELSDWFNVTARAGEKSTDRRVDRGRREVQVDVGVLV
KIYLESHQREPTVISNRPVVVPEGQNVSISREHLEVVHEDSQPSEIIFTVQSPPALGFLQ
RSSPFNQHQIVHREQQFSQGIREQQMTFTQNDVNQGLIVYHQQATGCTNDSVLLEATNGV
TKVGPIELEIDIIPILLPLQVSDLMLDEGSSLPLTSDIIKVANHHFSGMNFLYQVLVPPR
HGHLEHSRIPGMPITAFTHTEVEREYISYIHDGSDTQADNFTIVANQTEISKHSLPCTVH
ISITPVNDESPVVTNNRGLKVWVGSVTEITLEDLSAEDPDTSSEGLEFVVTPPSNGHLAL
KSAPSRHILNFTQSHIQSGQLVFVHSGALTGGFHFQVNDGVNFAPRQIFSTTARSLVLTL
QRNHPMEVYPGSVTLISEQELQVVTNGDSDNRRNHSVVFAVTAPPKLGRLLRRMPDNSTQ
NISTFTQSMVNDGVILYEQNKPETVGWSAVDSFSFTVSSPPAFLPPNTFTLLISFLANKH
HDNPQHNTRLLNNAGAVVAEGGRVTIDRSKLDASNLLRKVPEPRRKDTHIQYRVVSLPQH
GVLSIRGYNITRDTPDFTQITLNKFGVTYVHDDSETTSDSFTFQAWVAPLDRSSSSSLSS
SSSSSTSLSASSSSAPYSFSPLYSASSSSFSSPGTASRPQIKDGLVVTETFNITVTPVND
QPPLIRSRSPSMKVVIGERVILGPDYLQVEDHDTPPEELHYLVISKPNNGYLTLGERPEP
VTSFTQYDVNHGRLHFTQQGEASTGVIYFNVTDGHHRPLYKLFSLEVIKPSVSIVNNTGL
SLVQGRTAVVLSTTQLAAQTNGRSQANITYTVTTHPRHGRIVINDQEVATFCHEDLQFGR
VVYHMTDLSESEDMFQISVSASSPGVDYGNVTAQTVEVTVRPLVYLREPVRVPSGIAVKL
GKAMIDASELARISRADPVFEVLSPPKHGKLVKMTYDPNRASEVLKSFTFRDVVQGRVAI
EESLSDGDNQLHGNKTALTTARGHTPARPLNDSFIFLVKAGTVQPAKGELHFTIFPHHQM
RHGASGLSKEDGVSHKRATTRLPTHNKTTSGGGRVSGRGGSTTQSGAEVGLHPHILSHKN
HNRTQHRSRPHSRWGNHTRGGSHGGRSASPAEGAGGHTQQPHSPPDKHGPMIHPDNHPVH
FEVVPRPASDPLLIILPLLACLLLIIILVVLILVFRHRKEKQARLRLIQELAAVALPPED
SPYLGRPERSMAMPSVVVTPLGPASCPASPKIQLMPKRRRQSLAPGMTFWGPIDADGRGG
HGNIRVGANNERDNVICRNVPPAVTAGFKTSVRARSPTLKHNQYWV
NT seq
7701 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtttggtggctgagctttttcttttcctgctgatttccacaggacaagttaat
gcagtgtctttctatggcgatggctacatccacctgcggacagtggaatcatcatttcag
aacttgctccacgtccgatttagaacctccagtcaggccgggttgctgtttctggcagca
ggacatagagacttcttgttgctggagctgatatctgggcatctgcaggtacgtttggac
ctgggctcaggtgagcatttactacgctcacaaaagggcattaaccttagtgacctgggg
tggcactctatggagctgatccatgaccaacataatgtcaccatgactgtggaccaaaac
tctgtcaccactctccatatgccaggaccagatgtggaactcctcgtggaggttggagtt
tttgtcggtggagcagttggtctgaactacccctatctactcaacatctccactgggttt
agaggctgtgtggaggaagtggtgttcaatgaacacaacctactgtccagcttgagacgg
tattctgggtacaagagtgtccacgaggtatctttagggtgtaatatgcagttttctgcc
acagaagaagaaccaattagttttttcagctccaaagccttcgtgtcactcccaccatgg
gaggtaccacaagaaggagtgtttgaatgtgaacttcacccatctgcaagacaagataat
ggtatggtcctatatagctctggcaaccagggagtgtttgttgccatagagattatagaa
ggtcacctggtggcaacaattggacatggagaggggagtaaagtcgagcttcgatcccta
acgaatgtcttcagcaatcacacctggtactctatcaagcttcacctgctaccccacagc
atccagattaagctagacaaggagttaatcaagactaatttaagtctggagctacaaatc
atccaactcgaagggcctctttttctaggaggactgaacgaagaagcacgcgtggaggca
gcgcgagctggtttgctctctgccttgtcaggaggaggctcctttaaaggctgccttcgg
gaaattaaggtgaacaatcaaagaacaggcatcccccatgctgttgtcactaaggacatc
actgtgggctgtcgggtgggacaagccattgtggtgctgaccaacaacagctcaacaatt
agtccagagtttaatattacaaccccaaagccaacgatcaataagaggaaccctaacttt
ttgtttctgagaaagctagaggtagaagagggaggccgggcaccactggagcccaaacac
atcaaggttaatctggatttccgtaaattaggcatccatccttcccagtttaagttccac
attgaggaacagcctgttcatggccagctccggctggacctcagtccagacgctgatgga
atacaggatgagggcaaagaggggactatcgtattaggaacagaagagaaggacaggact
ttcagtatgcttgacctatggcagggccgggtgatgtatgttcacagtggatcagaggac
cagagtgacttcttcatcttttcagtattctccactaagaagcagcctcctgtgcttcag
aggggcatacgtctgcatcggtttgatatcatcattagccctgtaaatgatgcaccagtg
ctcagcctcccagagggcaatcttttcactctgctggagaagtccaagcgacagctgaca
gcagatatgttgagagtgctggatcctgacagcagtcctgcagagctggtgttcagctcc
cttggagacctccacactgaggccggacaccttgagcatgaggattacccaaatagagcc
attaacctgttctccctacatgacctggaggatggtaaaatcagctttgtccacagtggg
gtctccactgctagattgccactcagggtcagtgatgggcagaagtcaagcaacacagtc
attttgcggatcatggcagtgccacttgaacacaaactggtgaacaacacaggattggag
gtaaatcaaggcgaggcctctatcatcacaaccagccatcttgcagtacaagttaatgtg
tctggccaagcagtggaaattcgatatgacatgacagagtccccgcaatacggcgagctc
cagcggttacactcgagtggcgagtggaaagtgacaacttcgttctctcagaaacttcta
gaaaaagaacgtatcagatacctcagcacttaccgaggcctgcagacccagaacaacatc
acggatcagttcaaatgcaaagtcagcattaattccaatgctactgaggaggttgttttc
cccgttatggtgcgctggatccacttcaaggtcacacgaagcaaaatggaggtcaacagt
gttcagccagctgttgtgacccctgagaacctccatgttgtttcaaagggggtcaggctc
aatgagagcaacctccacttcatacttctcactgcgccaaagaaaggtcgactactcctt
gaagacaaagttcttctcaagaattcaaccttcagccagaaaaatatcacagacggtttg
gtgaagtacgagctgtacaacaggctaaccgacgacacaagagacacattccgctttcgg
gtcttttcagcacacgccagctcgacaagttacgacttcagaatcaacatcaaaaatgag
tcgacggccatcaccatcgtaaacgaaggccttacgatactcgaaggagggagtaaagtc
ataaccaaagacatcctcttcaccaacaccgcaagtaaccgagaagtcaagtacaccgtc
acgaagagccccatgcatggacagataaggaagatcaacctctccaactcatcctccatc
aacgacaatgtggtactcttcacaaaccgggatattatggaggagaggatcatgtacgtt
cacgatgacagcgaaaccaagcaggattcttttacatttcaaatcatggtgaacaaacca
cataaacacaccagcaagaaagaggagcgacacactgcagagcaggcctttaacatctca
gtgcagctcgtcaatgatcagagacctgcgagagtcgtcgataaagttttccacgtggcc
cgcgatagccaaagactggtgacgttgaatgacatttgctacagggacgacgattccgac
tttgaggacagctggttggtgtacactcgaagggggattcccatgggagacctggtgctg
gccagtaatcccagtcacaaactgtacgagtttacacagcgggaccttgagcagaaaaag
gtgttatttgtccacagaggagtgagtttcgggcgttttgtgctttttgtgtcagatggg
aaacattatgtgtccactctgctggaggtaatggcccaggatccttacctggaagtggag
aacaacaccggcctcttggtacagcaaggtggtgtcacaaccttgacctccgctaacctc
agcatctttagcaaccttgacatccgagatccagaggaagtgacgttcgacgtcttccgt
ccgcctaaacacggtttcctctgcttcaatgacggcgactgtgacactgcaaaaggagca
gatgcaattaaaagcttcacccagcgggacctggtggaagggcgtttggcatatcgccac
gacggcagccaggaattgtcagattggttcaatgtgacggcacgagcaggggaaaagagc
acagataggcgagtggacagagggaggagggaggtccaagtggacgtcggagtgctggta
aagatctacctggagagtcatcagagggagccaacggtcataagtaaccgtccagttgtg
gtgccagaaggacagaatgtttccatcagcagggaacatttagaggtggtccatgaggac
agccaaccttctgagataattttcactgtacaaagtcctcccgccctgggctttcttcag
agatcctcccccttcaaccagcaccagatcgtccatagagaacagcagttctctcagggc
atcagagagcagcagatgaccttcacccagaatgacgtgaaccagggattgattgtctat
catcaacaggccacaggatgcaccaatgactctgttctgttggaggcaaccaatggagtc
acaaaggttggacccattgagctggagatcgatattattcccatcctgctccctctacag
gtgtctgatttgatgcttgacgaggggtcatccctgccactcaccagtgacatcatcaag
gtcgccaatcaccacttctcaggcatgaacttcctgtatcaagtcctcgtcccaccacgg
catggacacctggagcacagccggataccggggatgcccatcactgctttcacacacact
gaggtggaacgcgagtacatctcctacatccatgatggcagcgacacacaggcggacaac
ttcactattgttgccaatcagacggaaatcagcaaacacagtttgccctgcacagttcac
atcagcatcacgccggtcaatgacgagtctcctgtcgttacaaacaaccggggtctgaag
gtgtgggtgggttcggtgactgaaatcaccttagaagatcttagtgcagaggaccctgac
acttcctctgaggggctggagtttgtggtcacaccacccagcaacgggcaccttgctctg
aagagcgccccctccagacacatcctgaatttcacccagagtcacatacaaagtggacaa
ctggtgtttgtgcacagtggtgcgttgactggaggctttcacttccaggtaaatgatggt
gtcaactttgcccctcgtcagatctttagcaccactgcacgatctctggtcctcactctg
cagagaaaccatccaatggaggtctacccaggctctgtgacgctgatctccgagcaggag
cttcaggtggtaaccaacggcgacagcgataacagaaggaaccactctgtggtgtttgca
gtgaccgctcctcctaaactcggccgcctgctccgacgcatgcctgacaactcaacgcaa
aacatttccacattcacacaaagcatggtgaatgatggggttatcctgtacgaacagaac
aagccagagacagtcggatggtcggctgtagattccttctctttcactgtgtcctctcct
cctgctttccttccgccaaacaccttcaccctcttaatctccttcctggctaacaagcat
catgacaaccctcaacacaacaccagactactgaacaatgcaggtgctgtggtggcagag
gggggcagggttacgattgacaggtccaaactcgatgcctccaatctcctgaggaaagtc
ccagagcctcgacggaaagacactcacatccagtaccgtgtcgtttctctgccacagcac
ggagtcctgtccatacgaggatataatatcaccagagacacaccagatttcacacagatc
accctgaataagttcggcgtcacctatgtccacgacgactctgagacgacgagcgacagc
ttcacgttccaggcttgggtggctcctctggatcgctcctcctcctcttccttatcctct
tcctcttcctcctcaacgtccttgtcggcgtcttcctcctccgccccgtactccttctcc
cctctctattcagcctcgtcgtcctccttttcgtcgccagggacggcttctcgtccccaa
atcaaagacggcctggtggtgacggagacgttcaacatcaccgtgacgccagtcaacgat
cagccgccgcttatcaggagcagatccccgagtatgaaggtggtgattggagagagagtc
atacttggcccggactatttgcaggttgaggatcacgacacgcctccagaggagctgcac
taccttgtgatcagtaaacccaacaatggttacctgacgctgggcgaaagaccagagcct
gtgacgtccttcacccagtatgacgtcaaccatgggcggctgcatttcacacagcagggc
gaggcctcgacaggtgtcatctacttcaatgtcactgacggccatcaccgccccctctac
aaactcttcagtttggaggtgatcaagccgtctgtctccatcgtgaacaacaccggcctg
tcactggtacaaggcaggaccgccgtggtcctctcgaccacccagctggcagctcagacc
aacggtcgcagccaggccaacatcacctacaccgtcaccacgcaccctcgccacgggcgc
atcgttataaacgaccaggaggtcgcaaccttctgccacgaggacctgcagtttggccgc
gtggtctaccacatgacggatctcagcgagtcagaggacatgttccaaatctccgtgtcg
gcctcgtcgcctggtgtggactatgggaacgtaacggcacagacggtggaggtaacggtg
cggccgttggtctacctgagggagccggtgcgggtacccagtggtatcgctgtgaagctg
gggaaagccatgatcgacgcgtccgagctggcgagaatcagccgagctgacccagtcttt
gaggttctgtctccaccgaaacatggaaaactagtcaagatgacgtatgacccaaaccga
gcatcagaggtcctgaagtcgttcacgtttagagatgtggtgcaaggacgagtcgccatc
gaggagtcgctcagcgacggtgacaaccagctccacggcaacaaaacggcgctcacgacg
gctcgaggtcacacccccgccagacctctcaatgactccttcatcttcctagtgaaggct
ggaaccgtgcagccggcgaagggcgagcttcacttcaccatctttccccaccaccagatg
cgtcacggtgcgagtggtttgagcaaagaagacggcgtgagtcacaaacgcgccacgacc
cgtctgccgacacataacaagacaacgtccggaggcgggagagtgagtggacgaggggga
tccacgacccagagcggcgctgaggtgggtttgcatccgcacattttgtcacataaaaac
cacaacaggacacagcacaggtcgaggcctcacagccgatgggggaaccatacgcgcggc
ggaagccacggagggagatcggcgagccccgcagagggagctggaggtcacactcaacaa
ccccactctcctccagacaaacatggcccgatgatccatcctgacaaccacccggttcac
ttcgaggtcgtccctcgtcctgcctctgacccgctcctcatcatcctgcctctgctggcc
tgtttgctcctcatcattattctcgtggttttgattctcgtgttccgccaccgaaaggag
aaacaggcccggctgcggctcatccaggagctggctgcggtagcgttaccccctgaggac
agtccttacctgggccggccggagcggagcatggcgatgccatctgtggtggtgacccca
ctgggccctgcaagctgccccgcctcaccgaagatacaactaatgcctaagaggaggagg
cagagtctggcccctggaatgaccttctggggaccgattgacgctgatggaagaggaggc
catgggaatattcgagttggtgccaataatgaacgagataatgtgatttgtcgtaacgta
cccccagctgttactgcaggcttcaagacctcggtgagagccaggtccccgactcttaaa
cacaaccagtactgggtctga
DBGET
integrated database retrieval system
