Solea senegalensis (Senegalese sole): 122758802
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Entry
122758802 CDS
T07721
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03420
Nucleotide excision repair
ssen03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
122758802 (ercc4)
03460 Fanconi anemia pathway
122758802 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssen03032
]
122758802 (ercc4)
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122758802 (ercc4)
DNA replication proteins [BR:
ssen03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
122758802 (ercc4)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
122758802 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
122758802
NCBI-ProteinID:
XP_043869055
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All DBs
Position
LG18 :complement(2983687..2988790)
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AA seq
902 aa
AA seq
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MAGPLLEYETEMFLSVFGCDGLLVAAEGLGIDRILLQFMRVYSEQDSLVLLLNTTTPEQE
YLTEQLRVEGVTHLPRTVTSDVQSTERYNVYTEGGVLFVTSRILVVDFLTDRIPAHLISG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATALSSGFCQVERVMRNLFVKKL
YLWPRFQASVNTALDRHKPEVVELHVSLTPAMRAIQSSILDIMGACLKELKRYNPSLEVE
DLSLENTLGKAFEKTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCVTFLNLL
ESLRSSQKSFGSNSGWLFLDSSTSMFVNARSRVYRIAESKKKLKVGSEAEKQKSSSASEV
KRDLVLEKSPKWEALTEVLQEIERENKSSELEPGRVLICASDDRTCAQLQQYIRHGSDWL
LHRLYTRTIGKRDSAAAAALDLESHSKGKGWAKKGGKGKEPAQKKNTKSTKSKSRPSLTL
TQMVGKGETDEVAALGSSGDDEELMEDDESEDEQMKLNLSSDAYYGVLKEPLTVIHPLKG
CTDPHSLTRVLHEVEPSFVVLYDAEVSFVRQLEIYKASRPGKALRVYFLIYGGSTEEQKY
LTALSKEKKAFEHLIREKATMVIPEEREGREDTNLDLARNLEPANATTNTRKAGGQEQPK
EPSRVIVDMREFRSELPSMLHRRGLDIEPVTLEVGDYILTPDICVERKSVSDLIGSLQSG
RLYTQCLSMTRYYKKPVLLIEFDPAKPFSLTARSDFRHEISSNDISSKLTLLTLHFPRLR
ILWCPSPHATADLFVELKKGRLEPDAAAAQAVTAESDTVAESAGLYNPGPYDFLLKMPGV
STKNYRSLIKSADSLADLTKLSQDKLAEILGNAHNAKSLYEFLHNVADVPAPVQKAKHAS
KE
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcccgctcctggagtacgagacggagatgttcctgagtgtgttcggctgtgac
gggctgctggtggcggcggaggggcttgggatagaccgcatactactgcagttcatgcgg
gtttactccgagcaggacagcctggtgcttctgctcaacacaactacacccgaacaggaa
tatctcacagagcagttgcgtgtggagggtgtgacccacctgcccaggacagtgaccagt
gatgtccagagcacagagcgttataatgtttacaccgaaggaggagtgctgtttgtcacc
agcagaatcctggtggtggacttcctcactgaccgcattcctgctcatctcatatcaggc
atcctggtgtatcgcgcccataaaatcatcgagtcttgtcaggaggctttcatcctacgc
ctgttcagacaaaagaacaagactggtttcattaaggccttcactgacaaggccacagcc
ctctcctcaggcttctgtcaggtggagcgtgtgatgaggaacctctttgtcaagaagctc
tacctgtggcccaggttccaagcatcagtgaacacagcactggacaggcataagccagag
gtggtggagcttcatgtgtcactgacgccagctatgagggccatccagagctccatcctg
gacattatgggtgcctgtctgaaggagctgaaacgctacaacccgtctctggaggttgag
gacctctcattggaaaacacactgggaaaggcttttgaaaagaccattcgtcactatctg
gaccccctgtggcatcagcttggagctaagaccaaggcactggtccaggacttgaaggta
ctccgtgttcttctgctttacctcacccagtatgactgtgtcaccttcctcaatctcctt
gagtcactgcgctccagccaaaagagctttggctccaattcaggctggctgttcctcgac
tccagcacctccatgtttgtgaacgcccggagtcgagtgtaccgcatcgctgagagcaag
aagaaactcaaagtgggatcagaggctgagaaacagaagtcatcttctgcctcagaggtg
aaacgagacctggtgctggagaaaagcccaaagtgggaggcgctgactgaggtgctgcag
gagattgagagggagaacaagagctcagaacttgaaccaggtcgtgtgctgatctgtgcc
agtgatgaccgtacttgtgcccagctgcagcagtacatcaggcacggctcagattggctg
ctgcacagattatatactcgcacgattggcaaacgggactccgctgctgctgctgccttg
gaccttgagtcacacagtaaaggaaaaggttgggccaaaaaaggaggcaaggggaaggag
cccgcacagaagaaaaacacaaaatccacgaagagtaaaagcagaccgtctctgaccctg
acccagatggtcgggaagggggagactgacgaagttgccgcgttgggcagcagcggagat
gacgaagaactgatggaggacgatgaaagcgaggacgaacagatgaagttgaatttgtcc
tctgatgcttactatggtgtgctgaaggagcctctgactgttatccacccgctgaaaggc
tgcaccgacccccacagcttgacacgggtgctgcacgaggttgaacccagttttgtggtg
ctgtacgacgctgaagtgagttttgtccgacagctggagatctacaaagccagccggcct
gggaaggcactccgggtttattttctcatttatggaggatcgacagaagaacagaagtac
ttgacagcactctctaaggagaagaaagcctttgaacacctcatcagggaaaaagctact
atggtcataccggaggagagggagggacgagaagacaccaacctcgatcttgctcgaaat
ttagagcctgccaatgcaactaccaacacccgcaaagcaggaggccaggagcagccgaaa
gagccttcgcgagtcattgtagacatgcgtgagttccgcagcgaacttccctccatgctg
catcgccgtggactggacatcgaaccggtcaccctagaagtaggtgactacatcctcacg
ccagacatatgcgtggagcgcaagagcgtcagcgatctgatcggctctctgcagagcggc
cgcctctacacccagtgtctctccatgacccgctactacaagaaaccagtgctgcttatt
gagtttgacccagcgaaaccgttctccttgacggcccgatcagacttccggcacgagata
tcatcgaatgacatttcttcaaaactcactcttctcacgttgcattttccccggctgcga
atactctggtgcccctccccacatgctacggcggacctttttgtagagctgaagaaaggc
cgcctcgaacccgacgccgccgcagctcaggcggtcacggctgagtcggacacggtggct
gaatcagcaggcctctataaccccggaccttatgactttctgttaaaaatgcctggggtc
agcacgaaaaactacaggtccttgataaaaagtgcagacagtctggcggatttaaccaaa
ctcagccaggacaaacttgcagaaatacttggaaatgctcacaatgctaagtcactgtat
gagtttctgcacaatgttgcagatgttcctgctcctgtgcaaaaggccaaacacgcatca
aaggaataa
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