Solea senegalensis (Senegalese sole): 122758963
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Entry
122758963 CDS
T07721
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssen03016
]
122758963 (trub1)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
122758963 (trub1)
Transfer RNA biogenesis [BR:
ssen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122758963 (trub1)
Prokaryotic type
122758963 (trub1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PT
GAIN_A
Pus10_C
Motif
Other DBs
NCBI-GeneID:
122758963
NCBI-ProteinID:
XP_043869314
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All DBs
Position
LG18 :6114867..6119410
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AA seq
299 aa
AA seq
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MAGSAAPMNSSLSKLQSLNGLFAIYKKQGPTSADVLNTLKETLLKEAGVKNANPRKRKKQ
SLKLGHGGTLDSAASGVLVVGVGTGTKTLSTMLAGSKKYVAVGELGKATDTLDATGKVTL
EKDFDHITRVDMEEKLKSFTGDIMQVPPLYSALKKDGQRLSVLLKQGHKVEAKPARPVTV
YNLTLQEFKPPLFTLDIECGGGFYVRSLVDDLGKALSSCAHVKTLVRTKQGQFTLEEHAL
PEEKWTLEHIVRSMQPCSVSEQSTKPSDQPAEKPAEKPAEKPAEEPSEKNSVNHAENKT
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagcgccgcaccgatgaactcttctctgtctaaactacagtctttgaatgga
ttgtttgctatttataaaaaacagggaccgacatctgcagacgtgttgaataccctcaaa
gagactttgctcaaagaggctggtgttaaaaacgcaaacccgcggaagagaaagaaacag
agtctaaaactgggacatggagggactctagacagtgctgccagtggggtattagttgtt
ggtgttggaacaggcacaaaaacactcagtaccatgttagccggttcaaagaaatacgtt
gctgtgggggaactgggcaaagcaacagacacacttgatgctactggcaaagtgactctg
gagaaagacttcgatcacatcaccagggtggacatggaggagaagctgaagtccttcact
ggtgacatcatgcaagttcctccactctactctgctctgaagaaggacggccagcgtctg
tctgtcctgctgaagcaaggtcacaaggtcgaggccaaacctgccagaccagtgactgtg
tacaacctgaccctgcaggagttcaagcctcctctgttcactctggatattgagtgtggt
ggtggattttacgtcagaagcttggtggatgacctgggaaaagctctgtcgtcctgtgct
cacgtgaagacgctggtgcggaccaagcagggtcagttcaccctggaggagcatgctttg
cctgaggagaagtggacactggaacatattgtgcgctctatgcagccctgctctgtatca
gagcagagcacaaaaccatcagaccaaccagcagagaaaccagcagagaaaccagcagag
aaaccagcagaggaaccatcagagaaaaacagtgtgaaccatgctgaaaacaagacatga
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