Solea senegalensis (Senegalese sole): 122759000
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Entry
122759000 CDS
T07721
Name
(RefSeq) protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
122759000
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssen01009
]
122759000
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122759000
Protein phosphatases and associated proteins [BR:
ssen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122759000
Cell adhesion molecules [BR:
ssen04515
]
Cadherins
Protocadherins
122759000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
LYRIC
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
122759000
NCBI-ProteinID:
XP_043869379
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All DBs
Position
LG18 :14435447..14490253
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AA seq
1103 aa
AA seq
DB search
MRTTGAVDYLYYCMLILQLVNQPAAKQVLRYRLAEEGPADVRVGNVATDLGIVAGSGEVT
FTLESGSDFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
NGETSRRLGSSGDSYSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDS
YELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEADLPENSSPGAPILQLKAA
DADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQP
PKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGIANVAEDVVVDTPIALVQVSDRDQG
ENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYEATQEYNVVIVAVDSGSP
SLASNNSLIVKVGDTNDNPPIFSQNVVEVSFPENNAPGERVTTVVAIDADSGKNAEIAYS
LDSSVNGIFSIDADSGDIRVNIILDREQTERYEFKVIAKDKGINTLQGSATVVVLVADKN
DNEPKFMQDVFTFYVKENLEPNSPVGMVTVIDADKGRNAEMSLFIEEEADIFSIENDTGT
IFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPMVTFPINSSYTLL
NPATNIGTVVRTVIATDSDTGINADLNYSVIGGNPFKLFEIDGGSGVISLVRKLELKHYG
LHRLVVQVNDRGLPSQSTTTLVHVYVNETLYNSTVVEAQVAKSLSTSLNTNIAGDPNYDL
SKQRLSIVIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKSKK
PKKDRKKQKSKQPLYSSIVTVEASKPNGQRYDSVNEKLSDSPGMGRYRSVNGGPGSPDLA
RHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSDYSSQTIN
KYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLDESETPSSKSSSGPRLGALPLPEDS
YERTTPDGSVGEAEHMENGRGKH
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaggactactggcgcagtggactatttgtactattgcatgctcatcctgcagctcgtc
aatcagcccgctgccaagcaagtgctccggtaccgtttggccgaggagggacccgcggat
gtcagagtggggaacgttgccaccgacctgggcatcgtcgcagggtctggagaggtgaca
ttcacgctggagtcaggatctgattttttcaaaatagacaacataacaggtgagctcacc
accaacgagaggcggatagaccgcgagaaactgcagcagtgccaaatgatatttgatgag
aatgagtgctttatagattttgaagtgtcagtgataggacctgcccagagctgggtcgac
ctgtttgagggaaaagtcatcatattagatataaatgacaacacaccatcgttcccttcc
cctgtcctgacactgtcagtggaggagaacagacccattggaaccctttacctgctgccc
acagccacagacagagactttggcagaaatggaatagagagatatgagctgatccaggac
aatggggagacctcaaggcgcttgggctcctctggggattcgtactcagggaagaggagg
tttgatgaaggcgcaagtaggagcagcgtattcgagctgcaagttgcagacaccactgat
ggagagaaacagccccagctcatcattaaaggggcccttgacagggagcagagggactct
tatgagctcacactgcgcgtgagggatggaggagatccccctcgctcctcccaggccatc
ctccgggtgatgatcaccgatgtgaatgacaacagcccccgctttgagaagagtgtgtac
gaagcggacctgccagagaacagctcccccggtgcccccatactccagctcaaagcagca
gatgcagacgtgggggttaatggtcagattgagtatgtgtttggggcagccacggagtcg
gtgaggaggctgctgaggctggacgagagcacggggtggctgagtgtgttgcaccgcatc
gaccgtgaagaagtgagccaactgaggttcacagtaatggcccgtgaccgcggtcagcca
cctaaaatggacaaggcgacagtggtgctgaacattaaggatgaaaatgacaatgtccct
gcgattgagatacggaaaatcggacgcatcttcttgaaagatggtatagctaatgtggct
gaggacgtggtggtggacacacccattgccttagttcaggtgtcggaccgagaccagggg
gaaaatggcatagtgacctgcacggtcgtcggggatgtgccctttcagctcaaacctgcg
agtgaaatggagggcgagcagaataaaaagaaatatttcctccacacatctgcaccgctg
gactatgaggccacacaggaatataatgtggtcattgtggccgtggactccggaagcccc
agtctggcgagtaataactctctaattgtcaaagtgggtgacaccaatgacaaccctcct
atctttagccagaatgttgtcgaggtgtcattcccagaaaacaatgccccaggcgagagg
gtgacaacagtggtggccattgacgcagatagtgggaagaatgctgaaatagcttattcc
ctcgactcatcagtgaatgggattttctccattgatgcagacagcggagacatccgagta
aacatcattttggacagagagcaaacggagcgctacgaattcaaagtgatagccaaagat
aagggcataaacacgcttcagggctctgcaacagtggtcgtcctcgtggccgacaagaat
gacaatgagccaaagttcatgcaggatgtgttcaccttttatgtcaaagagaacctggag
ccaaacagccccgttggcatggtaacagtgattgatgcagacaaaggccggaatgcagag
atgagcctttttattgaggaagaggcggacatcttttccatcgagaatgacactgggact
attttctccacgctgtcttttgatagagagcagaaaaccacgtacaccttccgcgtcaaa
gctgtggatggtggtgacccccccagatcggccactgccacagtttctctctttgtcatg
gatgaaaatgacaacgcaccaatggtgactttcccaatcaacagctcctacacgcttctc
aaccctgccactaacatcggaacagtcgtcagaactgtcatcgccactgactctgacacc
ggcatcaatgcggacctgaactacagcgtgatcgggggaaaccccttcaagctgttcgag
attgatggaggatctggggtcatttcactggtgaggaagctggagctgaagcattatggc
ctccacagactagtggtgcaggtgaatgacagagggctgccttcacagagcaccacgaca
ctggtccacgtgtatgtcaatgagactctttacaattccacagttgtggaggcccaggtg
gctaagagcctgagcacgtctcttaacacaaacattgccggtgaccccaactatgatctc
agcaaacagcggttaagcattgtaatcggagtagtttcgggcatcatgacggtcatcctc
attattcttgttgttgtcatggctcgttattgccgtcccaagaataagaatggctacgag
gccggcaagaaggaccacgaggacttctttacgccacagcagcacgacaagtccaagaag
cccaagaaagacaggaagaaacagaaatcaaaacagccgctctacagcagcattgtcacc
gttgaggcctccaaacccaacggacagcgctacgacagcgtcaacgagaagctgtcggac
agtccaggcatgggccgctaccgttctgtcaacggagggccggggagcccagatttggca
cgacactacaagtccagttcaccactcccgactgtccagcttcatccgcagtcgccaaca
gctggaaaaaagcaccaggcagttcaggacctgccccctgctaatacctttgttggcacc
ggagataacatttcccttggatctgaccactgctccgactacagcagtcaaactatcaac
aagtacaacaaacagccgtttcgccgagtgaccttctctgtggtgagccagccccaggac
cctcaccagcagggatcgctgcagagctgctacgacagcggcctggacgagtcggagacg
cccagcagcaagagttcatcgggcccccggctgggcgcccttcccctgcctgaggacagc
tacgagaggacaacgccggatggcagtgtcggtgaggcagagcacatggaaaatggtagg
ggcaaacactga
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