Solea senegalensis (Senegalese sole): 122759152
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Entry
122759152 CDS
T07721
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssen03037
]
122759152 (ift140)
Cilium and associated proteins [BR:
ssen03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
122759152 (ift140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
TPR_IFT80_172
TPR_COPA_B
Beta-prop_HPS5
WD40_Prp19
TPR_GEMI5
Clathrin
tRNA_int_end_N2
Beta-prop_CAF1B_HIR1
RNase_HII
FIMAH
Motif
Other DBs
NCBI-GeneID:
122759152
NCBI-ProteinID:
XP_043869674
LinkDB
All DBs
Position
LG18 :complement(2296072..2307917)
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AA seq
1443 aa
AA seq
DB search
MAVYFDHRIEAPESSAVPSHLTWHPALPVLAVASSSPTTGGNVDLYLQQGEHVESCHVQR
PHQPTVLRWHPTKPVLALGWENGEVTLLTHPSGDQTVLPSVHAACITLLEWSSFGSRLVT
GDQAGALAVWKVDARGRFQGNHLVKHEYHKPLTCCIFRPVSPGVDVAMLARLSVSGDENA
LDMFSWKGAPLKIGPQEGLGFYVSTIDGTVHSVDEHCKTSTLLSVEGAIKKLFYLHKKEA
LAVITDTLTLSQYTLRPEGGAQELMKVKLSSKTGQNVDIVWTDHSLLVTATGEHIIRLWD
LERDENYVLSLDETLGFEKGELINCVSYCAGKEVLSAGTSRGRIAVWRTVAQPSSSRGDT
GVQWKLQTPTEIQGNVTQLQWGSSLNLLAANNSNTVLILCEHVMSAHFSQQLAAVQLTPT
QLSISQFTTDTHLALQADIHIKGVCVTKDSVTVWSGKQVVVYELSGTALRHTGSFPCDSH
VVAAHDENLYTVEPNRVQIRTPQGTVKQLLTFSKAEGNPVLLSVCQAYLVVGTDTAHIRV
FDLSRRDAKAHCSTKNLADQIANLGALRSVKCNANGSQVSILISQVNGRPDQKVYFYDVE
MDTVTHFDFFTGRPSSGLSHLEDSERQLFQGTELSGRCPVSHYWDESEPRLFVCETVPVG
SESTSSSSVDMVDVSVVTLFCTQEHGLLLQDCYPKPAGLQAFLALDVPYYYFSCKPGERE
PEVAAPQRQTQPPKGGSASFPHMVSRRALRDFVGLENCEKATRDAMLNFSFYLTIGDMDE
AFKSIKLIKSKAVWENMARMCVKTCRLDVAHVCLGNMGNARAAKALREAETEPEPEAQVA
MLAIQLGMLEDAEKLYKSCHRCDLLNSFYQASGQWQKALETAEIHDRIHLRTTYYSYAKY
LESIGNKSLAIAYYENSDTHRAEVPRMLQEDVSSLEVYVNKMKDKSIYKWWAQYLESQSD
MDSALHYYECAQDYLSLVRVHCYMGNIQKASEIANNTGDRAASYHLARNYEGHDDIKQAV
HFYTRAQAYNNAIRLCKENGLDDQLMNLALLSNPEDMMEAACYYEEKGTHMDRAVALYHK
AGYVSKALELAFTTQQFAALQSIAEDLNEKADPALLERCSDFFVTHSKYEKAVELLVTAK
KYPQALELCVAQNLTITEELAERMTVTDSKDLSEDARKDLLERIADCCMRQGNYHLATKK
YTQAGNKPKAMRSLLKSGDTEKIIFFANVCRQKELFIMAANYLQSLDWRKDPEILKTIIS
FYTKGRAPDLLAGFYEACAQVEIDDYQNYEKALDALTEAAKCLSKSKDSSHGQHEVRLAD
LQHKVVLIKKFVHARRLYAENPGEAVQICEALLDEPELDPAVRIGDAFGFLVEHHCQQGN
FQLAYKKLEELQKLLPSQNVRYYISQASLAALQKSLGVSLERGDTRRIVKEEEDEVEEDL
DMP
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtattttgaccaccgcattgaggctcctgaaagcagtgctgtgccctctcac
ttgacctggcacccggctcttcctgtcctcgctgtggcctcaagcagccccactactgga
ggcaatgtagacctctatctgcagcagggtgaacatgtggagagctgccacgtccaacgt
ccacaccagcccacggtgctgcgctggcatcccacgaagccggtgttggcgctgggctgg
gagaacggagaggtcacgctgctgactcacccatcaggagatcaaaccgtgctgccgagc
gtacacgcagcctgcattacactgctggagtggagcagctttggcagccgcttagtgacc
ggggatcaggctggagctctggccgtatggaaggtcgacgccagaggaagatttcaagga
aaccatctcgtaaagcacgaataccacaaacctttaacctgctgcatcttcagacctgtc
tcgcctggggttgatgtagcaatgttagcgcgattgtcagtgagtggagacgaaaatgcc
ctggacatgttcagctggaagggagcgccgctcaagatcggcccacaagagggactgggg
ttttacgtcagcactattgacggtacggtccacagtgtggatgagcattgtaagaccagc
acacttctcagtgtcgagggtgcaatcaagaaactgttctacctccataagaaagaggcg
ctcgctgtgatcacagacactctgacgctatcgcagtacaccctgagacctgagggagga
gcccaggaattaatgaaggtgaagttgagcagcaagactggacagaatgtggacatcgtg
tggacagatcacagtcttctcgtcacagcgacgggcgaacacatcatcaggctgtgggac
ctggagcgagatgaaaactacgtgttgtccctggacgaaacgctggggttcgagaaggga
gagctgatcaactgtgtgtcatactgtgcaggaaaagaagtcctgtcagccggcacgagc
cgtggacgtatagctgtgtggaggacggtggctcagccgagcagcagcagaggagacacc
ggcgtccagtggaaactacagacgcccacagaaatacagggaaacgtcactcagttacag
tggggctccagcctgaatctcttggccgccaacaactcaaacacggtgctcatcctgtgc
gagcatgtgatgtcggcgcacttcagccagcagctggcggcggtgcaactcaccccgacc
cagctcagcatcagtcagttcaccacggacacacacctggctctgcaggctgacatacac
atcaagggagtgtgtgtgactaaggactcggtgacggtgtggagcggcaagcaggtcgtc
gtctacgagctttcagggacagcgctgcgccacacaggatcgtttccatgtgactctcac
gtcgtggctgcacacgacgagaacctctacactgttgaacctaaccgggtacagatccgc
actccacagggcaccgtgaagcaactgttgactttctccaaggcagagggaaaccccgtg
ctgctgagtgtgtgccaggcgtacctggtggtcggcacagacacggcacacatcagagtc
tttgacctctcgcgcagagatgccaaagctcactgcagcactaagaatctggcggaccag
attgccaatctgggtgcactgaggtcagtcaagtgtaacgccaacggcagccaagtcagc
atcttaatctctcaggttaatgggcgaccggaccagaaagtgtacttctatgacgtagaa
atggacacggtgacgcactttgacttcttcactggcagaccatcgagtggtctgtcacat
ctcgaagacagtgaaaggcagctgttccaggggacggagctcagcggccgctgccccgtg
tcccattactgggatgagagtgaacctcgtctgtttgtgtgtgaaacagtgccagtcggc
tctgaatcaacatcgtccagctctgtggatatggtggacgtgtctgtggtgacactcttc
tgtacacaggagcatgggctgctccttcaggactgctatcccaagcccgcaggcctgcag
gccttcctcgctctagatgtgccctactattatttcagctgcaagcctggtgagcgggaa
ccagaggttgcagcacctcagcgtcagacgcagccgccgaagggaggatcggcgtcgttc
cctcacatggtgtccaggagagctctcagggactttgtgggcctggagaactgtgagaag
gccacgcgcgacgccatgctcaacttcagcttctacctcaccatcggagacatggacgaa
gctttcaagtccatcaagctcatcaagagcaaagcagtatgggaaaacatggcccggatg
tgtgtgaaaacctgccgactggatgtggcacacgtgtgcctcgggaatatgggaaacgcc
agggcagcaaaagcactgcgggaggcggagactgagcctgagccagaagcacaagtggcg
atgttggccattcagctcggcatgctggaagacgctgaaaagttgtacaagtcctgtcac
cgctgcgaccttctgaacagtttctaccaggcctctggtcagtggcagaaagcactagag
acggcggaaatccacgaccgcatccacctgcgcaccacctactacagttacgccaaatac
ctggagtccatcggcaacaagagtctggctattgcatactatgagaattcagacacacac
agggctgaagtacccagaatgctccaggaagacgtgtcgtctctggaggtttatgtcaac
aaaatgaaagacaagagcatctacaagtggtgggcccagtatttggagagccagtccgac
atggactcagcgctgcattattatgaatgtgctcaggattatctctctctggtccgagtc
cactgctacatgggcaacatccagaaggcgtctgagatcgctaataacacgggcgacaga
gcggcgtcgtaccacctggccagaaactacgagggtcatgatgatattaaacaggccgtc
cacttctacacacgagcacaggcgtacaacaatgccatccggctttgtaaggagaacggt
ctggacgaccagctgatgaacctggctctgctcagtaacccagaggacatgatggaggcc
gcctgctactacgaagagaagggcacgcacatggaccgagccgtcgccctctaccataag
gctggttatgtgtccaaagctctggagttggccttcaccacacagcagtttgctgcactc
cagtcgatcgccgaggatctgaacgagaaagcagacccggctctcctggaacgctgctca
gacttcttcgttacacattcaaagtatgagaaggctgtggagttactggtcacggcgaag
aagtaccctcaagccctggagctgtgcgtggcccagaacctgacgatcacagaggagctg
gccgagagaatgactgtgaccgattcaaaggatttgtctgaagacgcccgcaaggacctg
ctggagaggatcgctgactgctgcatgcgtcagggcaattaccacctggctaccaagaag
tacacacaggcgggcaacaagcccaaggccatgaggtcactcctgaagtcgggcgacacc
gagaaaatcatcttctttgccaacgtttgtcgtcagaaggagcttttcatcatggctgcc
aactatctgcagtctctggactggcgtaaagatccagaaatcttgaaaactatcattagt
ttttacactaaaggcagggcaccggacctgctcgctggcttctatgaagcctgtgctcag
gtggagatcgacgattaccagaactatgaaaaggcgttagacgctctcaccgaagctgcc
aagtgtctgtcaaagtcaaaggactcctcacacggacagcatgaagtacgactggctgac
ctgcagcataaggtcgtcctcatcaagaagtttgtccatgcacgcaggttgtacgcggag
aatcctggcgaggctgtgcagatatgtgaagctctgctggacgagccggagttagacccc
gctgtcaggattggcgatgcgtttggtttcctggtggaacaccactgtcaacaaggcaac
ttccaattggcctacaaaaagctggaggagctccagaagctgctgccatcccagaacgtt
aggtactacattagccaggcgagtctcgcagccctgcagaagagtttgggcgtgtcctta
gagcgaggtgacaccaggcgcattgtgaaggaggaggaggatgaagtcgaggaggattta
gacatgccttaa
DBGET
integrated database retrieval system
