Solea senegalensis (Senegalese sole): 122759244
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Entry
122759244 CDS
T07721
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122759244 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122759244 (vti1a)
Membrane trafficking [BR:
ssen04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
122759244 (vti1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Mer2
Laminin_II
Sec8_N
CAP59_mtransfer
DUF1664
DUF5344
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
122759244
NCBI-ProteinID:
XP_043869880
LinkDB
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Position
LG18 :12754430..12860607
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AA seq
224 aa
AA seq
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MSSDFETYEQDFATLTAEVTNKIGRIPKLSGEEKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPIQSRAMYNSRLKSYKQEMEKLEKDFKRSRIAYSDEVRNELLGEDAGSSENQLIKLRE
ERAHLLDNTEKLERSSRRLEAGYQIAVETEQVGQEVLANLHSDREKIQRARERLRETDAN
LGKSSRILTGMLRRIIQNRILVFVLGAIILLTIILAIYFNLRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagacttcgagacctacgagcaggactttgccacccttacagcagaagtaact
aacaaaattggccgaattcccaaactcagtggagaggagaagacgcagctggttctaaat
gtcgacaaacagctcgaagaagtcagagagttgctggagcagatggacctggaggtgcgg
gagattcccatccagagtcgagccatgtacaacagcagactgaagagctacaagcaggaa
atggagaagctcgagaaagactttaaaaggtcacgcattgcctacagtgacgaggtgcgc
aacgagctcctcggggaagacgccggctcctctgagaaccagttgataaagttacgtgaa
gagagagcgcatctgttggacaatacagagaagctggaaaggtcatcacggagactggag
gctggctaccagatagcagtagaaactgaacaagtgggtcaggaggttcttgccaacctg
cacagtgaccgtgagaagatccagagagccagagaaagactgagagaaacagacgccaac
ctgggcaagagttctcgcatccttaccggcatgctgagaaggatcatccagaatcggatc
ctggtcttcgtccttggagccattattcttctcaccatcatcctggccatctatttcaat
ctgcggggccactga
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