Solea senegalensis (Senegalese sole): 122759274
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Entry
122759274 CDS
T07721
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04136
Autophagy - other
ssen04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122759274
04136 Autophagy - other
122759274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122759274
03029 Mitochondrial biogenesis [BR:
ssen03029
]
122759274
Membrane trafficking [BR:
ssen04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
122759274
Mitochondrial biogenesis [BR:
ssen03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122759274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_WDR19_1st
EIF3I
Beta-prop_NWD2_C
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_HPS5
BCAS3_WD40
Beta-prop_WDR35_TULP_N
RMC1_N
Motif
Other DBs
NCBI-GeneID:
122759274
NCBI-ProteinID:
XP_043869956
LinkDB
All DBs
Position
LG18 :5352147..5360007
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AA seq
455 aa
AA seq
DB search
MEPQDLPDFAEVDRGFICASFNQDTTQKSRHHQSGSERSSLSVGTKTGYRLFSVTAVDKL
DCIHEGVECPDVYIVERLFSSSLVVVVSLSMPRRMNVYHFKKGTEICNYSYSNNILSVRL
NRQRLVVCLEESIYIHNIKDMKLLKTLLNTPTNLSGLCALSVNHGNSYLAYPGSATIGEI
TIYDANNLSTVTLIQAHDSPLAALTFNASGTKLASASEKGTVIRVFSIPEGQRLFEFRRG
MKRYVSISSLSFSADAQFLCASSNTETVHIFKLEQHSPSQEEESPTWSAYVGKMFTAAST
YLPAQVSDMMHQDRAFATVRLNMFGLKNICALAMIQKLPRLLVASSDGFLYVYNVDPQDG
GECVLVQKHRLFDSSEEQVEENEELTQDASPQPAGQSYAATVALPSTPPSSTTLMGYSED
GGAQKGEVIPEHEFAESPICLDDENEFPPVGNQSN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggagccccaggatttaccggatttcgcagaagtggaccgaggattcatctgcgcctcg
tttaaccaggacaccacccagaagtcgaggcatcaccagtcaggaagtgaacgcagttct
ctgtctgtgggcaccaagactggctaccgactcttctcagtcaccgctgtggacaaactg
gactgtatccatgaaggagttgaatgtccagacgtgtacatcgtggagcggctgttctcc
agcagcctggtggtggtggtcagtctgtccatgccacggcgaatgaacgtctaccacttc
aagaagggcacggagatctgtaactacagctactccaacaacatcctctccgtcaggctc
aacagacagcggctggtggtttgtctggaggagtccatctacatccacaacatcaaagac
atgaaactactcaagaccctgctcaacacacccaccaacctgtcaggtctctgcgcgctc
tccgtcaaccacggtaactcatacctggcgtaccctggcagtgccaccatcggagagatc
accatctacgatgcaaacaacctgagcacggtgacactgattcaggcccatgacagtcca
ctggcggctctcaccttcaacgcctctggcaccaaactggccagcgcatcagagaaggga
actgtgatcagagtcttcagcattcctgagggacagaggctgtttgaattccggcgaggg
atgaagaggtatgttagcatcagttcattgtccttcagtgctgatgcccagttcctctgc
gcgtccagcaacacagagacggtccatatctttaaactggagcagcacagccccagtcaa
gaggaggagtctcccacatggtcagcatatgtgggcaaaatgttcactgcagccagcacc
tacttgcccgcccaggtgtcagacatgatgcatcaggacagagccttcgcgaccgttcgc
ctcaacatgttcggcctgaagaacatctgcgccctggcaatgattcagaagctccctcgc
ctgctggtggcgtcctcggacggatttctctacgtctataacgtggatccacaagatgga
ggcgagtgtgtccttgtccaaaaacacaggttgtttgactccagcgaggagcaggtagaa
gagaatgaagagctgacacaggacgcctctcctcaaccagccggccaatcgtacgcagcc
actgtggcgcttccttcaaccccgccctcctccaccaccctcatgggttactctgaagat
ggcggagcccagaagggcgaggttattccagagcacgaattcgccgagagccccatctgt
ctggacgacgagaacgagttccctccggtcggcaaccagagtaactga
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