Solea senegalensis (Senegalese sole): 122759325
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Entry
122759325 CDS
T07721
Name
(RefSeq) transcription factor Sox-8-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122759325
Transcription factors [BR:
ssen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122759325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122759325
NCBI-ProteinID:
XP_043870044
LinkDB
All DBs
Position
LG18:complement(3699181..3704114)
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AA seq
484 aa
AA seq
DB search
MTEETKPFTEHPCSPAGSDRSMTPHGSDSESPASAAESDARDTASGNTPQRGAETERFPT
CIRDAVSQVLKGYDWSLVPMPSHGERGLKSKPHVKRPMNAFMVWAQAARRKLADQYPHLH
NAELSKTLGKLWRILSETEKRPFVEEAERLRLQHKKDYPDYKYQPRRRKSSKPGLGDCKA
GLVQQQQDLFKTEPGTTRVAGTGDTHHHYYPDRTGQSHGPPTPPTTPKTDLHSGGKHDGH
QVVDGGGGGGGSGSSVPPPGRQNIDFSKVDISELSTDVISTIDGFDVHEFDQYLPPNSHS
SAVLTPSDSSHGHNTTTTTTTGSFVLPSVYSHSHSSPIWTPKSSSGPSPGMPPTSSSSDT
NEDSGHKPQIKMEQMSPGHYNSSSSSTPPPPPEYTSLNSGTCPPSSSSSTSSSTSSASQY
NDLQCPSFYSAFSGYPTGLYQYPYFHSSRSPYATQLINSLALAPSPHSPPSGWEQPIYTT
LSRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggagaccaaaccgtttacggagcatccgtgcagtccagcgggcagcgaccgc
tccatgaccccgcatggttcggactcagagtctccagcttctgcagcggagtctgacgca
cgggacactgcgtccggaaacacgccgcagcgtggcgcggagaccgagcgcttccccacc
tgcatccgcgacgcggtgtcgcaggtgttgaagggctacgactggtcgctggtgccgatg
cccagtcacggagagcgaggactgaagagtaaacctcacgtcaagcggccgatgaacgcg
ttcatggtttgggcgcaggcggcgcgcaggaagctggcggatcagtatcctcacctgcat
aacgccgagctcagcaagacgctggggaaactgtggcgaattctctctgaaacagagaag
cgtccctttgtcgaggaggccgagaggctgaggctgcagcacaagaaagactaccccgac
tacaagtaccagcctcgaagacggaagagctcaaaaccgggtttaggggattgtaaggct
ggactggtccagcaacagcaagatttgtttaagacagaaccagggacgaccagggtggct
ggtacgggggacacacatcatcattactatccagacaggacaggtcagtctcatggacct
ccaacacctcccactactccaaaaactgacctccactcaggtggtaaacatgatggccac
caggttgtggatggcggcggtggcggcggcggcagtggcagctctgttccacctcctggc
cgacagaacatcgacttcagcaaagtggacatctcagagctcagcactgacgtcatcagc
accatcgatggattcgatgtgcacgagtttgaccagtatctgcctccaaacagccacagc
tccgctgttctaactccgtcagactccagccacggacacaacaccaccaccaccaccacc
acaggatcgttcgtcctaccgagcgtctactctcactcccacagcagtccaatctggact
cccaaatcttctagtggtccatcgcctggaatgccaccaacatcttctagtagtgacacc
aatgaggacagtggccacaaacctcagattaaaatggagcagatgagcccaggtcactac
aacagctcgtcctcttctactccaccacctcctccagagtacacctccctcaactcagga
acctgccctccctcctcctcctcctctacatcttcctctacatcttccgccagccagtac
aatgaccttcagtgccccagtttctacagcgccttctccggctaccccaccggtctgtat
caatacccgtacttccactcctccaggagtccctacgccacgcagcttatcaacagtttg
gccttggcaccgtctccgcacagtcctccctctggctgggagcaaccaatctacacaacg
ctctccaggccttga
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