Solea senegalensis (Senegalese sole): 122759381
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Entry
122759381 CDS
T07721
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122759381 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122759381 (gspt1)
03012 Translation factors [BR:
ssen03012
]
122759381 (gspt1)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122759381 (gspt1)
Translation factors [BR:
ssen03012
]
Eukaryotic type
Release factors
122759381 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
122759381
NCBI-ProteinID:
XP_043870159
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Position
LG18 :complement(3276113..3286156)
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AA seq
571 aa
AA seq
DB search
MDPRDTAPDSWELEVDIEAPAAAAGLPSAFAALNVNAKPFVPNVNAPVFVPSFLQSSAEE
MPASDAPMENGGTEADMTTEEETWEQKEEPGGGGGGGGQDDLESGGACEEEDATRKEDEE
MMEEEEEEMPVPKVAPVPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEK
YEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPN
MIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVN
WSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDLIPDCTWYTGLPFIAHL
DSLPIFTRSSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHTVEVLSLLS
DDVETDDAVPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRTFDAQIVIIEHKSIICP
GYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRAAGVICLETF
KDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagagacacagcccctgattcgtgggagctggaggtggacatcgaggccccg
gctgccgcggcgggacttccgagcgccttcgccgcgctcaacgtcaacgccaagccgttc
gtgcccaacgtcaacgccccggtgtttgtgccgagcttcctccaaagcagcgctgaggaa
atgccggcgtcagacgccccaatggagaacggaggcaccgaggccgacatgaccacagag
gaggagacttgggagcagaaagaggagccgggaggaggcggaggaggcggaggacaggac
gacctggagtcaggaggagcgtgcgaggaggaggacgccacgagaaaagaagatgaggag
atgatggaggaggaagaggaggaaatgcctgtacctaaagtggctccggtaccacctgat
gcccccaagaaagaacatgttaatgtggtgttcatcggtcacgtggatgctggaaaatcg
accatcggaggacagataatgtacttgactggaatggtggacaagagaaccctggaaaaa
tatgaaagagaagcaaaagaaaagaacagggagacatggtacctgtcgtgggcactggac
acaaaccaggaggagagagataaagggaagacggtggaggtcgggagagcttactttgaa
acggagaaaaaacatttcaccatcctcgatgcccccggacacaagagctttgtccccaac
atgattggtggagcgtcacaggctgacctggcagtgctggtgatttctgcgagaaagggc
gagttcgagaccggctttgagaagggcgggcaaacccgggaacacgccatgctggctaag
acggcaggagtcaagcatctcattgtcctgattaacaagatggacgaccccactgtcaac
tggagcctggagaggtatgaggaatgtaaggagaagctggtgccatttttaaagaaagtg
ggcttcaatcctaagaaggacatccactttatgccttgttctggactcacaggtgccaat
ctcaaggatcttatacccgattgcacctggtacacaggtttgccatttattgcccatctg
gacagtttgccaatcttcaccagatccagcgatggaccagtcagactacctatcgtggac
aagtacaaggacatgggcacggtcattctcgggaaactggagtctggatccatcagtaaa
gcccagcagttggtcatgatgccaaacaggcacacggtggaggtgctgagcctgctgagc
gatgacgtggagaccgatgatgccgtcccaggggagaatctgaagttgaggctgaagggc
atcgaggaggaagaaatcctgcctggttttatcctgtgtagccccgacaacctctgccac
tctggtcgcacctttgacgcacagatcgtcatcattgagcacaaatcaataatttgcccc
ggttacaatgcagtccttcacatccacacgtgcattgaagaagtgcaaatcacggcctta
atctgcctggtggacaagaaaaccggggagaagagcaaaacacgaccacgttttgttaaa
caggaccaggtgtgtatcgccaggctccgggcggcaggagtcatctgcttagagactttc
aaagacttccctcaaatgggacgattcacgctgcgggatgaaggcaaaactattgccatt
ggcaaagtgctgaagctggtgccagaaaaggactaa
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