Solea senegalensis (Senegalese sole): 122759429
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Entry
122759429 CDS
T07721
Name
(RefSeq) CLIP-associating protein 1-B-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122759429
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssen04812
]
122759429
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
122759429
Cytoskeleton proteins [BR:
ssen04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
122759429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Adaptin_N
Cnd1
HEAT_DAAF5
ParcG
Paxt-1_C
TAN
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
122759429
NCBI-ProteinID:
XP_043870250
LinkDB
All DBs
Position
LG2:complement(35925317..35953621)
Genome browser
AA seq
1636 aa
AA seq
DB search
MEEDEVVVVVSIEYLLEQTMQKDLGRRLQEGQEIIEIILDQERSPDLEQDQNTLDRMVDA
VASSWVNSSNFKVVLLGMDILSALVSRLQEKFRTQVGTVLPSLIDRLGDAKDQVRDQDQA
LLLKIMDQAANPQYVWERMVGGFKHKNNRTREGLCLCLISTLNVFGSQSLTLSKIVPHIC
NLLGDPTSQVRDGAMNCLVEIYRHVGERVRIDLGKKGLPQSRLNVIFSKFDEVQRSGNMV
LSPLSDKNFEDDDSVDGGRSLSSSKGAPLSGKKTVSMGTFRRPSSASSSKSAGKDGSGAG
AVDEDDFIQAFEDVPTVQIYSNREVDEAMTKIRDVLSDDKRDWELRVAALKKVRSLVLAG
APEFEGFLQQLRLMEAAFKLSAKDLRSQVVREACITLGHLSLVLGSRFDHAAEAVMPALL
NLVPNSAKIMATSGVAVIRLILRHTHYPRLIPIIASNCASKSVAVRRRCFEFLELMLQEW
QTSSLERHGTVVMETIKKGIHDADAEARSVARKCYWSYHAHFSREAEQLFQGLESSYQKA
LQAHLRSGDSLMSLPASDRSSSSSQESLNRPVSVKSSARSNTSRSKHAKPTHSSRTAATA
ASSPGSLQRSRSDVDVNAAATATARTRMPTVPSVSSASPFSAASALPPGSYASLDASWSV
NADGRVRTRRTSAGNGPCVTDSRGRSRGKVVSQSQPGSRSGSPGRLLSATYGRKPRPTMG
TAAAAAATNPNTSTSQTDKSRPRGHRSQGCSRETSPTRSGMARSRIPRPSMSQGCSRETS
RESSRDTSPTRGFSPLATRRHSRSTSALSSAECYSDRLSHQARISASVNAMKILNTGTEV
EAAVADALLLGDSRSKQRRPARRRFESPGMYSDDDANSDASSACSERSYGSRNGGMAPHY
LRQDVDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRMLSRVELKRLCEIFTRMFADPHS
KRVFSMFLETLVDFIILHRDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESF
SYEQQFNILMRFIVDQTQTPNLKVKVAILRYIEALARQMDPSDFVNSSETRLAVSRIITW
TTEPKSSDVRKTLHNWAGEDFSGRCSTVASLPGEGNLEERCKQAAQVVLIALFELNTPEF
TMLLGALPKTFQDGTTKLLHNHLRNASANSGIVMSSPCNSMGRTPPRQSNSRSSPLTSPT
NCSHGGLSPSRLWGWSADGLSKFPAPPFPSPPLPPPTAHSSLKALRRAYSPSMLEYDSEN
LNSEEIYSSLRGVTEAIQNFSFRSQEDLMEPLRRDGKRDGMAGVAASSDSGVDLMEGGRT
ALDNKTSLLNTPSPRSFTGPRFRDYNPYNYTDSISTVDKAALKEALHEDAVDGRRQESVE
NKILPPKSFPTSPSEQLELVGELLKELSQGQVGERGPEERRGNLLELLKVVREDSVLVWE
EHFKTMLLLLLETLGDKDHTIRALSMRVLKEILRNEPARFKNYAELTIMKTLEAHKDSHK
EVVRAAEEAASTLASSIHPDQCIKVLCPIVQTADYPINLAAIKMQTRAIERITKEPLHQL
LPDVIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPYLAQLTGSKMKLLNLYIKRA
QTSTSNSSSSSDISSY
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgaggtggtggtggtggtgagcatagagtatctgctggagcagaccatg
cagaaggacctggggaggaggctccaggagggtcaggagatcatagagatcatcctggac
caagagaggtctcctgacctggagcaggaccaaaatacgctggacaggatggtggacgcg
gtggccagctcctgggtcaactccagcaacttcaaggtggttctgttggggatggacatt
ctgtcggctctggtcagtcgactgcaggagaaattcaggacacaagttggaactgttctg
ccgagcctcatcgatcgactcggagacgccaaggaccaagttcgggaccaggaccaagcg
cttctgctgaagatcatggaccaggctgcaaacccacagtacgtgtgggagcgaatggtg
ggtggcttcaaacacaagaacaaccggaccagagaaggactctgcctctgcctcatctca
acattaaacgtgtttggatctcagagtctgacgctcagtaaaatcgttcctcacatctgt
aacctcctcggagaccccaccagtcaggtgcgagacggcgccatgaactgcctcgttgag
atctaccgacacgttggagagcgagtgcgcattgacctgggaaagaagggtctgcctcag
tcacggctgaatgtcatcttcagtaaatttgacgaagttcaaaggtcggggaacatggtc
ctgtcacctctgtccgacaaaaacttcgaggacgatgactcggtggacggtggccgctcc
ttgtcctcgtccaaaggagccccgctgtccgggaagaagacggtgagcatggggacgttt
cgccggccaagctccgcctccagcagcaagtctgcagggaaggacggctctggagcagga
gctgtggacgaggacgacttcatccaggcctttgaggacgttcccacagtgcaaatttac
tccaacagagaagtggacgaggccatgaccaagatacgagatgtgctgtcggacgacaag
agggactgggagctgagagtggcagctctgaagaaggtgcgttcgctggtcctggctgga
gctcctgagtttgaagggttcctgcagcagctgcggctcatggaggcggcgttcaagctg
tcggccaaagacctgcgctctcaggtggtgagagaagcctgcatcactctgggtcacctg
tcgctggttctcggcagccgcttcgaccacgcagcggaggccgtcatgccggcactgctc
aacctggttcccaacagtgccaaaatcatggccacgtccggcgtggccgtcatccgcctc
atccttagacacactcactaccctcgtctcatccccatcatcgccagcaactgtgcatcc
aaatctgtggcggtcaggagacgctgctttgagtttttggagttgatgctgcaggagtgg
cagaccagctcactggagagacatgggacagttgtgatggagacgataaagaaaggaatt
cacgatgcagacgccgaggctcgctctgtggccagaaagtgttactggagttaccacgcc
cacttcagcagggaggcagagcagctcttccagggcctggagtcgtcctatcagaaagca
ctgcaggctcacctgaggagcggggacagtctgatgtcactgcccgcctctgaccgctcc
tcctcctcctctcaagagagcctcaatcgacccgtgtctgtgaaaagcagcgccagaagc
aacaccagcagaagtaaacacgccaaacccactcactcctccagaactgccgccaccgca
gcttcctctccaggctccctccaacgttctcgcagtgacgtggacgtaaacgccgccgcc
actgccacagcccgcaccaggatgcccacagtcccctctgtgtcctcagcttctcccttc
agcgcggcctcggcgcttcctcctggatcctacgcttctctggatgcctcatggtctgtg
aatgcagatggtcgagtgagaacccggaggacgagcgcaggaaacggtccgtgtgtgacg
gacagtcgtggtcgtagcagagggaaggtcgtgtcacagtctcagcccgggagtcgctcg
ggttctccggggcgtctgctgagcgccacctacggcagaaaaccaagacctacgatgggc
accgccgccgctgctgccgccacgaaccccaacacgtcaaccagtcagacagacaagagc
cggcctcgaggtcaccgcagtcagggctgcagccgagagaccagtcccaccagatcagga
atggcccgcagtcgaatccctcgaccgagcatgagtcagggctgcagccgtgaaaccagt
cgcgagagcagccgcgacaccagccccaccaggggtttctcccccctggcgacgcggcgt
cactcccgctccaccagcgccctctcgtctgcagagtgctactcagaccgactttcccac
caggctcggatctcggcctccgtcaacgccatgaaaatcctcaacacgggcactgaggtg
gaggccgcggtggcagacgctctgctgttaggagactccaggagtaagcagcggcgcccg
gcgcggcggcgcttcgagtcgcccggcatgtactcggacgacgacgccaacagcgatgcg
tccagcgcctgctctgagcgctcgtacggctcgcgcaacggcggcatggcgccgcactac
ctgcgccaggacgtggacgtggcggaggtcctgaaccactgcgccagctctaactggtct
gagaggaaggagggtctgctgggactgcagaacctgctcaagagccagaggatgctcagt
cgcgtggagctgaagagactgtgtgagatcttcaccaggatgtttgcagaccctcacagt
aagagagtgttcagcatgttcctggagactctggtggacttcatcattcttcacagagac
gacctgcaggactggctctttgttctgctcacacagctgctgaagaagatgggagcagac
ctgctgggctctgtccaggccaaagtccagaaggctctggacgtcaccagagagtctttt
tcatacgaacagcagttcaacatcctcatgcgtttcatcgtggaccagacgcagacgccc
aacctgaaggtgaaggtggccatcctgcgctacatcgaggctctcgctcgccagatggac
ccgtcagactttgtcaactccagcgagacgcgcctcgccgtctcgcgcatcatcacgtgg
acgaccgagccaaagagctccgacgtccgcaagacccttcacaactgggcaggggaggat
ttctcaggtcgctgcagcactgtggcctctctgccaggagagggaaacctggaggagagg
tgcaagcaggcagctcaggtggtgctgatcgctctgtttgagttgaacacaccagagttc
accatgctgctcggagctctgcccaaaaccttccaggacggaacgaccaagttgctgcac
aaccacctgaggaacgccagcgccaacagtggcatcgtcatgtcgtctccctgtaactcg
atgggtcggactccacctcgacagtcgaacagtcgcagcagtccactgacctcacccacc
aactgctcccacggcggactctcacccagtcgtctatggggctggagcgcagacggtctc
tcaaagttccctgctccacccttcccctccccccctcttcctccacccactgctcactcc
tccctcaaggcgctgcggcgagcttactcacccagcatgctggagtacgacagcgagaac
ctgaactcggaggaaatctacagctcgctgcgcggcgtcactgaggccatccagaacttc
agcttccgcagccaagaggatctgatggagccgctgaggcgcgacggcaagagggatggc
atggccggtgtggcggcgtcttcagactctggtgttgacctgatggagggcggacgcacg
gcgttggacaacaagacatcgctgctgaacacgccgtcaccgcgctccttcaccggcccg
cgcttccgtgactataatccgtacaactacactgacagcatcagcacggtggacaaagct
gccctgaaggaggcgctgcatgaggacgccgtcgacgggcgtcgacaagaaagtgttgaa
aacaagatcctgcccccgaaaagtttccccacgagtccctcggagcagttggagctggtg
ggggagctgctgaaggagctctctcagggtcaggtgggggagcgagggcctgaggagcgt
cgagggaacctgctggagctgctgaaggtggtgagagaggacagcgtgttggtgtgggag
gaacacttcaaaaccatgctgctgctgctgctggagacgctgggagacaaagaccacacg
atccgagctctgtctatgcgagtcctgaaggagatcctgaggaacgaaccggctcggttc
aagaactacgccgagctcactatcatgaagactctggaggctcacaaagactctcacaag
gaggtggtgcgggcggcggaggaagcggcgtccacactggcgagctccatccaccctgat
cagtgcatcaaggttctgtgtcccatagtgcagacggccgactatcccatcaacctggct
gctattaagatgcagaccagagccatcgaacgcatcaccaaggagccgctgcaccagctg
ctgcctgacgtcattcctggactcctgcagggttacgacaacacggagagcagcgtgagg
aaggccagcgtcttctgcctcgtcgccatctactctgtgattggggaggagctgaagccg
tatctggcccagctgactggcagcaagatgaagctgctgaacttgtacatcaagcgagcg
cagacgtcgaccagcaacagcagcagctcctccgacatctcctcctactga
DBGET
integrated database retrieval system
