Solea senegalensis (Senegalese sole): 122759650
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Entry
122759650 CDS
T07721
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
ssen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122759650
03015 mRNA surveillance pathway
122759650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122759650
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122759650
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_ACIN1
RRM_3
RRM_occluded
RRM_MUD2_C
RRM_5
RBD_AKAP-17A
Nup35_RRM_2
RAP1
Motif
Other DBs
NCBI-GeneID:
122759650
NCBI-ProteinID:
XP_043870546
LinkDB
All DBs
Position
LG18:5238733..5242926
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AA seq
275 aa
AA seq
DB search
MAPSPTKRKEDDKSKQRGKEKSGTTKEGADKDRSRDKNRTRRSASTGSSRSSSSSSSSSG
SSSGSSSGSSSSASSHSGSSSSRSSSSSSSSSSPSPSRQRHNNRRRSRSKSKSAKKDDRD
RRRRSPTPKPTKVYLGRLTRNVIKEHIQEIFSTYGKIKMIDMPMNRVHPHLSKGYAYVEF
ETHDEAEKALKHMDGGQIDGQEITVTAVLTPTVRPPPRRLSPPRRMPPPPPMWRRTPPRM
RRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttccccgacaaagagaaaggaggatgacaagagtaaacagcgaggcaaggag
aagtcaggaaccacgaaagaaggtgctgacaaagaccggagccgtgacaagaaccgcaca
cggcgcagtgcctccactgggagcagcaggtccagctccagctccagcagcagctcaggc
tccagctccggatcatccagcggctccagctcctcggcctccagccactcgggctcgtcc
agctcccgctcctcttcctcctcctcctcctcttcttcaccaagccccagccgccagcgc
cacaacaacagacggcgttcacgctcaaagtcaaaatcggcaaagaaggacgacagggac
agaagacgcaggagccccacacccaaacccaccaaggtctacctgggccggctgacgaga
aacgtcatcaaggaacacatccaggagatcttctccacctacggcaagatcaagatgatt
gacatgcccatgaaccgcgtccaccctcacctgtctaaaggctacgcgtatgtggagttt
gagactcacgacgaggcggagaaggccctgaaacacatggacggaggtcagattgacggt
caggagatcacagtcacagctgtgctgactcccaccgtgcgcccaccacctcgcaggctg
tctcctcctcgccggatgcctcctccacctccgatgtggcgacgcacgccgcctcgtatg
aggagaaggtctcggtctccgcggcgacgctctccagttcggcgcaggtctcggtcccct
ggccgccggcgccaccggtcacgctccagttctaactcctcgcgctaa
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