Solea senegalensis (Senegalese sole): 122760338
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Entry
122760338 CDS
T07721
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122760338 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122760338 (fip1l1b)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122760338 (fip1l1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
122760338
NCBI-ProteinID:
XP_043871384
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MSAEEADKTATTDASAGDEEEEWLYGDESESKDEDEEAKLNAAVSAPTDATEDAAAHATG
NGVASEATGEAAGEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYTTYGAPPVNLNIKTIGS
RPYGQASKLKGVDLDAPGNINGVPVVEVEMESFEEKPWRKPGADLSDYFNYGFNEDTWKA
YCEKQKRLRMGLEISTVSSVTSKITVRDSSAHVQQGRTGNEKDISTLPVHTSKPDFPSPV
SLYKSAVCQVTSRISPPQWIGPPVQDMSYYMKSGTIDVIGGQTATISRVEGRRRHNLEGN
NIQVISEHSTSDAEPTSAKIPTFFPPGPLPPNIPPPPFLPPPPNVSTAPPLIPPPRLPIT
VPPPGFPPPTSGPPPSIIPTLDSGHPGGYDGRSVPPYPFPQGAYPPPMAGGVPPPWPPIM
DNSKPWDYYSRRDDKRDKERDRPRERTHEREREREHSPSAMGYTSDEERYRFREYQERER
HRERLSREKEERHRERRHREKEEGRHKSSRSSSSRRRHDSEEGDSHRRHKHKKSKRSKEG
KEASEEISADQENQEAME
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaagcggacaaaacagcaaccactgatgctagcgctggagatgaggag
gaggaatggttgtatggagatgagtctgagagcaaagatgaggatgaagaagctaaactg
aacgctgcagtcagtgcacccactgatgccacagaggatgctgctgcacatgcaacggga
aatggagttgcctccgaggccacaggtgaagcggcaggtgaagatgtggacagtgatagt
gacagcgatgatgacgacgatgatgtacgagtcactatcggagacatcaaaactggagcc
cctcagtacacaacttatggagctcctcctgtaaatctcaacataaagacaattggctcc
agaccttatggacaagcctcaaagctgaagggagtggatcttgatgctcctggaaacatt
aatggggttccagtggttgaggtggaaatggagtcctttgaagagaaaccctggaggaag
ccaggagcggatttgtccgactactttaactatgggttcaatgaagacacgtggaaggcc
tactgtgaaaaacagaagaggctacgtatgggtctggagatttccacagtcagttcagtg
acaagcaagatcactgtgagagactcttctgctcatgttcagcaaggccgaacaggcaac
gagaaagacatttccactctgcctgttcatacttcgaagccagatttcccatctcctgtg
agcctgtacaagtctgccgtctgtcaggtcaccagtaggatctccccccctcagtggatt
ggcccacctgttcaggacatgtcctattatatgaagagtggtacgatcgatgtgattggt
ggacagacggccacaatcagcagggttgaagggcgacgcagacacaacctggagggaaac
aatatccaggtgatttctgaacactctacatcagatgctgaaccaacttcagctaagatt
cccaccttcttcccccctggaccacttcctccaaacatacctccacctccatttctccct
ccaccaccaaatgtcagcactgcgcccccactcatccccccaccaaggctacccattact
gtccctcctcctggttttcctcctccaacgagtgggcccccaccttccattatccccact
ttggacagtggtcaccctggaggttatgatggacgctctgttcctccataccccttccct
caaggagcttatcctccacccatggctggaggtgtgcctcctccatggcccccaataatg
gacaactctaaaccctgggattattattcccgtcgagatgacaagagggacaaggaaaga
gacaggcccagggagaggactcatgagcgggagagagaaagagagcatagtccttcagct
atgggctacactagtgatgaggagcggtatcgtttccgcgagtaccaggagcgtgagcgc
catcgtgaaaggttgagtcgagagaaagaggaaagacacagagagaggcggcaccgagaa
aaagaggaaggacgccacaagtcctctcgcagcagcagcagcaggaggagacacgacagc
gaggagggagacagccaccggaggcacaaacacaagaagagcaagaggagcaaggaggga
aaagaggccagtgaggagatcagtgcagaccaagagaaccaggaggccatggagtaa
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