Solea senegalensis (Senegalese sole): 122760459
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Entry
122760459 CDS
T07721
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04010
MAPK signaling pathway
ssen04020
Calcium signaling pathway
ssen04260
Cardiac muscle contraction
ssen04261
Adrenergic signaling in cardiomyocytes
ssen04270
Vascular smooth muscle contraction
ssen04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122760459
04020 Calcium signaling pathway
122760459
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
122760459
09153 Circulatory system
04260 Cardiac muscle contraction
122760459
04261 Adrenergic signaling in cardiomyocytes
122760459
04270 Vascular smooth muscle contraction
122760459
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122760459
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122760459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
DUF2670
Motif
Other DBs
NCBI-GeneID:
122760459
NCBI-ProteinID:
XP_043871493
LinkDB
All DBs
Position
Unknown
AA seq
1717 aa
AA seq
DB search
MAANAEAAKPVIMNEEELKRKQREKLKKLQATGGNPRPARSLFLFNLKNPFRKACINIVE
WKTFEIIILLTIFANCVALAVFLPMPEEDTNNTNLNLESLEYIFLIIFTLECFLKIVAYG
FVFHEGAYLRNCWNILDFVIVFMGLFTFIVDTIHHIAGMPIEKGGGFDMKALRAFRVLRP
LRLVSGVPSLQVVMNSILKAMLPLLHIALLVFLLVTIYAIMGLELFKCKMHKTCYYADTG
IYAIEEGELPSPCAQAGNGRRCIINGSECRPYWEGPNNGITHFDNIGFAMLTVFQCITME
GWTTVLYWVNDAIGNEWPWLYFVPLILVGSFFVLNLVLGVLSGEFTKEREKARSRGEFQK
LRERQQLDEDVHGYMEWITHAEVLDADREGIGLLPLTGGDPDTDSLYGLEGKSRIVYYYR
LARRWNRFFRMKCLVYVKTKCFYWVVMILVLINTLTIATEYHHQPEWLTSLQDVVSRVLL
VLFVIEMFVKMYALGPRAYFMSLFNRFDFFVVLCGILEMIMLSAGSVAPLGFSVLRCIRL
LRILKVTKYWTSLSNLVASLLNSVRSIASLLLLLFLFIVIFSLLGMQVFGGKFNFPDQRP
RRSNFDNFPQALISVFQVLTGEDWTTVMYNGIMAYGGPVFPGILVAIYFVVLYVCGNYIL
LNVFLAIAVDNLAEAESLTSAQKEKAEEKLRRKLLRSKMPDKTDEERERIAKKLAEQRAK
TEGMPTTAKLKIDEFESNVNEVKDPFPPADFPGDDEEVEPEIPISPRPRPMADLQLKEEA
VPLPVASSFFIFGPQNKFRKLCYKIINASSFTNLILLFILLSSISLAAEDPIDPKSYRNK
ILAYADIVFTTVFTIEIVLKMTVYGAFMHEGSFCRNSFNILDLLVVGVSLLSMGMESSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLNFLFACIGVQLF
RGKFYSCTDASKMTGEECQGYFMKHMENSLQDTMVAKREWLNSDFNFDNVLNGMLALFTV
STFEGWPKLLYRAIDSGEEDMGPVFNNRVDVSIFFIIYIILIAFFMMNIFVGFVIVTFQE
QGEEEYKDCELDKNQRQCVQYALKARPLRCYIPKNPYQYRVWYIVTSCYFEYLMFFLIML
NTLCLGMQHCNQSDHVTKLSDILNLIFTVLFTVEMILKLMAFKAKGYFGDPWNVFDFIIV
IGSVVDVILSEVDTALASSGGLYCLHGCAETNPMQVIAASENASVSITFFRLFRVMRLVK
LLNRSEGIRNLLWTFIKSFQALPHVALLIVMLFFIYAVIGMQIFGKVALVDGTQINRNNN
FQTFPQAVLMLFRCATGEAWQEVMVASMYGKKCDPKSDFQPGEEYTCGSNFAVFYFLSFY
CLCAFLILNLFVAVIMDNFDYLTRDWSLLGPHHLDEFKKIWAEYDPEATGRIKHLDVVTL
LRSIQPPLGFGKFCPHRAACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQ
ANEELRAIIKQIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLLQDHLRKFLKRQEEYYG
YRPSKKSASGPEIQAGLRSTEDEAAPEMHRTISGDLQNEEEMDRAMEEAGEEGIYQRTHS
LFGNRMDPFSTEPTDAQPPHMTKQRPLIFSDSQPESSPDFSPLTSTTEFFPTTKNNTNNN
AFAEFSFEREGSPDEFYNPSEDTDPGKRRDEAQTWGS
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacgcagaggcagcaaagccggtcatcatgaatgaagaggaactgaagagg
aagcagagggagaagctgaagaagctacaggccacgggaggcaaccctcgccccgcgaga
tccctcttcctcttcaacctcaagaatcccttccgcaaggcgtgcatcaacatcgtagag
tggaaaacatttgagatcatcatcttattgacgatctttgcaaactgtgttgctctggct
gtgtttctgcccatgcctgaagaagatactaataacaccaatttaaacttggagagtttg
gagtatatcttcttgataatcttcacattagagtgctttctgaagatagtggcgtacggg
tttgttttccatgaaggcgcctatttacggaactgttggaacatattggactttgtcatc
gtcttcatgggtctcttcacctttatcgtggatacgatccatcatatagcaggcatgccg
atagaaaagggtggagggtttgacatgaaggcactgagagccttcagggtgctacgacct
ctacgtctcgtctctggagtccctagtctgcaggtggtgatgaactccatcctcaaggca
atgctccctctgctgcacattgccctgcttgtcttcttattggttaccatctatgccatc
atgggactggagctcttcaagtgcaaaatgcacaagacctgctattacgctgacacgggt
atctatgctatagaagagggtgagctgccttcaccctgtgctcaggctggtaacggacgc
cgctgcatcatcaatggctccgagtgtcggccatactgggaaggtcccaacaacggcatc
acccactttgataacattggctttgccatgctcacagtcttccagtgtatcaccatggag
ggatggaccacagtgctctactgggttaatgatgctataggaaatgaatggccctggctc
tactttgttcccctcattctggtgggctccttcttcgtgcttaatctggttctgggcgtg
ctcagtggggagtttaccaaagagcgagagaaggccaggtcgcgtggagagtttcagaag
ttacgagagcgtcagcagcttgatgaagatgtgcatggctacatggagtggatcacccat
gctgaagtgctagatgcagaccgtgagggcataggactgctgcctttgaccggtggagat
cctgacacagacagcctgtatggcctggaaggcaaaagtcgaatcgtctactactaccgc
ctggcccgtcgctggaatcgttttttcaggatgaagtgcctggtgtatgtgaaaaccaag
tgtttctactgggtggtaatgatccttgttttgatcaacaccctgaccatagcgacagag
taccaccaccagcctgagtggcttacgtctcttcaagatgttgtcagtcgtgtgctgctg
gtgctgttcgtcattgagatgtttgtgaagatgtatgctctgggccctcgagcatatttc
atgtctctgtttaaccgctttgacttcttcgtggtgctgtgcggtatcctggagatgatc
atgttgtctgcaggatctgtggctccgttaggtttctctgtactcaggtgtattcggctg
ttgaggatccttaaagtcacaaagtactggacctctctgagtaaccttgtggcctctctc
ctcaactctgtccgctccattgcctccctgctcctcctcctctttctcttcatcgtcatc
ttctcactcctcggcatgcaggttttcggaggaaagttcaactttcccgaccaaagaccc
agacgcagtaactttgacaatttccctcaggccctcataagtgtatttcaggtcttgaca
ggagaggactggaccactgttatgtacaatggcattatggcctatggagggcctgttttc
cccggcatcctagttgccatctacttcgttgtcctctatgtttgtggaaactacatcctt
ctgaatgttttcttggccatcgccgtcgacaacctggcagaggctgagagtctgacctca
gcccagaaagagaaggcagaggagaagttgagaaggaagctactaaggtctaaaatgcct
gacaagactgatgaggaaagagagaggatagctaagaaactggcagagcagagggccaag
acagagggcatgcccaccactgctaagctaaaaattgatgagttcgagtcaaatgtcaat
gaagtgaaagatccattcccacctgccgacttcccgggtgatgatgaggaggtagagcct
gaaatccccatcagccctcgaccccgaccaatggccgacctgcagctgaaggaagaagcg
gttccattgcctgtcgccagctcctttttcatctttggccctcagaacaagttccgaaag
ctttgctacaagatcatcaacgcgtcgtccttcaccaacttaatcctcctgttcatcctg
ctctcctccatctctttggcggctgaggaccccattgatcccaagtcctacagaaacaag
atcttggcctatgctgacattgtcttcacaacggttttcaccattgagattgtactaaag
atgacagtgtatggagcattcatgcacgagggctccttttgtcggaactccttcaacatc
ctggatctgcttgtggtcggagtctccctgctttctatgggaatggaatcgagtgccatc
tctgtggtgaagattctcagggtgttgagggtgctcaggcctcttagggccatcaacaga
gctaaaggcttaaagcatgtggtccagtgtgtgtttgtcgccatcaaaaccatcggtaac
atcgtcctggtcaccatgctgttgaattttctctttgcctgtattggcgtgcaacttttc
aggggtaaattctacagctgcacagacgcctcaaaaatgaccggggaggaatgccaagga
tacttcatgaagcacatggagaattccttacaagacacgatggtggctaagagagaatgg
ctcaacagtgacttcaactttgacaacgtgctcaatggcatgctggctctcttcactgtt
tccacgtttgagggctggccaaaactgttatacagagccattgattcaggtgaagaagac
atgggccccgtcttcaacaaccgtgtggacgtctccatcttctttatcatctacatcatc
ctcatcgccttcttcatgatgaacatcttcgtgggcttcgtcatcgtcactttccaggag
cagggagaggaggagtataaggactgtgagctggacaagaaccagcgtcagtgtgtgcag
tacgcactgaaggctcgacctctgaggtgctacatccccaaaaacccctaccagtacagg
gtctggtacattgtcacctcctgctactttgagtacctcatgttcttcctgattatgctc
aataccttgtgtctggggatgcagcactgcaaccagtcagaccatgtgaccaagctgtcg
gacattttgaacttgatcttcactgtgctcttcactgtggagatgattcttaagctcatg
gccttcaaagcgaagggctacttcggagacccctggaacgtttttgatttcattattgtc
attggtagcgttgttgacgtcatcttgagcgaagtcgatactgccctggcctccagtgga
ggactgtactgtctccatggctgtgctgagacaaatcctatgcaagtgattgcggcctct
gaaaatgcctctgtttccatcacattcttccgactcttccgtgtcatgcgcctggtcaaa
ctgctgaaccgatcagaaggcattcgtaacctgctctggaccttcatcaaatccttccag
gcgcttcctcacgttgctctgctcatcgtgatgctcttctttatctatgctgtcattggg
atgcagatctttggaaaggtagccttagtggacggcacccaaattaaccgcaacaacaac
ttccagacattccctcaggctgttcttatgttattccgatgtgctaccggggaggcttgg
caggaggtcatggtagcgtcgatgtatgggaagaagtgtgaccccaagtctgattttcag
ccaggagaggagtacacctgcgggtccaactttgctgtcttctacttcctcagcttctac
tgtctctgtgcctttttgatcctcaacctgtttgtcgcggtcatcatggacaactttgac
tacctgacccgtgattggtcgctccttggtccacatcatctggatgagtttaagaagatc
tgggctgaatatgaccctgaagccactgggagaatcaaacatctggatgtggtgacgctg
ctgcgaagcatccagcctcctctgggctttggcaagttctgtcctcatcgtgccgcgtgc
aagcgtttggttggtatgaacatgcctctcaacagcgatggcacagtcactttcaatgcc
accctgtttgctctggtcagaactgctctcaagatcaaaactgaaggtaactttgagcag
gccaatgaagagctgagggccattataaaacaaatctggaaacgcaccagtatgaaactg
ttagaccaggtcatacccccgattggagatgatgaggtgactgtggggaaattctacgcc
accttcctccttcaggaccatttgcgcaaattcttgaagcgtcaggaggagtactacggc
taccggccctcaaagaagagcgcctcaggcccagagattcaggcgggtctgaggagtacg
gaggatgaggcagctccagagatgcacaggaccatttcaggagacctgcagaatgaggaa
gagatggacagagctatggaggaggctggagaagagggcatttaccagcgtacacactct
ctgtttggtaaccggatggacccgttctccactgagcccaccgacgctcagcctccacac
atgaccaaacagcgaccactcatattctccgacagtcagcctgagtcatcacctgacttt
tctcccttgacgtcgacaactgaattcttccccacaacaaagaacaacacaaacaataac
gcctttgcggagttttcatttgaaagagaaggcagtcctgatgagttttataatcccagt
gaggatacagatccaggtaagaggagagacgaggcacaaacatggggttcatga
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integrated database retrieval system