Solea senegalensis (Senegalese sole): 122760512
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Entry
122760512 CDS
T07721
Symbol
ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssen03009
]
122760512 (ighmbp2)
03012 Translation factors [BR:
ssen03012
]
122760512 (ighmbp2)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122760512 (ighmbp2)
5.6.2.5 RNA 5'-3' helicase
122760512 (ighmbp2)
Ribosome biogenesis [BR:
ssen03009
]
Eukaryotic type
Other ribosome biogenesis factors
122760512 (ighmbp2)
Translation factors [BR:
ssen03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122760512 (ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
AAA_19
R3H
zf-AN1
DEAD
Viral_helicase1
Helicase_RecD
nSTAND3
ResIII
UvrD-helicase
AAA_16
AAA_22
IstB_IS21
SLFN-g3_helicase
Flavi_DEAD
DnaB_C
PhoH
ATPase
NPHP3_N
AAA
AAA_25
HEM4
AAA_18
SRP54
Zot
ATPase_2
AAA_31
SpoIIAA-like
ABC_tran
Motif
Other DBs
NCBI-GeneID:
122760512
NCBI-ProteinID:
XP_043871520
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MAVEEFVSKTLELLQDEREAEIEETRLWQENISLKDLQNKGVCLLKLHIGSLSTGLYGRT
VLILEPRKHLGLSSLPSNSFGPGDIVGLYDTDGCTAASQIASGIVTRVSQASVHVAFDDS
KDGLSFNTDALYNLLKLANDVTYKRMKNALNALNRYNNGPAANLITVLFGDSKPSSQSQP
NEVGFFNLNLDDSQREAVSYALSQRELAVIHGPPGTGKTTTVVEIILQAVKQGQKVLCCA
PSNVAVDNLVERLAQCKAKVLRLGHPARLLDSIKKHSLDAILAQSDNANIITDIRKDIDT
AFMGMKKKQEKGERVNFRREIAELRKELKTRESTAIAQILKSADVVLSTNTGACDDGPLK
FLPAEHFDWVVIDECAQALESSCWIPLLRAHKCILAGDYKQLPPTIKSHKAASKGLSLSL
MERLIQMYGDSVVRMLTVQYRMNSAIMDWASKEMYQGRLTAHSSVERHLLKDLPGVTCVE
ETNTPLLLIDTAGCGLSEMEVTDEQSKGNQGEVDIVDLHIKALTEAGVKAKDIAVIAPYN
LQVDLLRQKLSTRHPELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVT
RARRHIAVVCDSQTVKNHAFLKSLIDHVTEFGETRTAFEYIQDIVPQNYSRNHRDATTKM
SASSSTSTKQKVRAQAPNNTKQGQKKSTNNGKENTACSEKRTKPRTSSENEQNKNRDAEI
REQVEKFLKDLNQFELQFPSSFNSHDRLLVHKIAEELCLVHESKGEGKDRCITVSRPLKM
APAVETAQKEEEAEEEEEEEDTIPNPQREPQSQPLLDLKSLHLERMKREQQRREENAQQK
KQHNNNIPAAQTQSSKKAKGKKRTKAGACDIAAAAAPEDDFDTLIGAVMKADSVCSFVKC
KASVLTLGQLCIFCNRQYCLSHHIPEVHGCGDKAKSHARMRISKEGVLYAGSGKKDKSMD
VNKKAYLQRKLDSKLKDMESKRKPKSKEKDS
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggaagaatttgtgtcaaagacactggagcttctacaggacgagagggaagct
gaaatagaggagaccagattatggcaagagaacatctctctcaaggatcttcaaaataaa
ggtgtttgcctgctgaagctgcatataggaagtctttccactggcctgtatggccgaaca
gtcctgatcctagagccaagaaagcatcttggtttatcatctcttccgagcaatagtttt
ggacctggtgatatagttggcttgtatgacactgatggatgcacagcggcctctcagatt
gcctcagggatagtgacgagggtcagtcaagcttccgtccatgtggcctttgacgattca
aaagatgggctcagttttaatactgacgctctttacaaccttttaaaattggcaaatgat
gtcacctacaaacgaatgaaaaacgccttgaatgcattaaatagatacaacaatggtcct
gcagccaatctgatcactgttctttttggagattcaaaaccttcttctcaatcacagccc
aatgaagttggattctttaacttgaacctggatgattcccaaagagaagctgtgtcatat
gctttgtctcagagagaactggctgtgattcatgggcctccaggaactggaaaaaccacc
acagtggtggagatcatcctgcaagcagtcaaacaaggccagaaggtcctttgctgtgcc
ccatctaatgtagctgtggataatttagtggagaggttagcccagtgcaaggccaaagtc
ttgaggctgggtcaccctgccaggctgctggattccattaagaaacattcactggatgcc
atccttgctcagagtgacaacgcaaacatcatcactgatatccgcaaagacatcgataca
gcttttatgggaatgaagaagaagcaggaaaaaggagagcgggtgaatttcagaagagaa
atagcagagctgaggaaagagctgaaaaccagagaatcaacagccattgctcagatccta
aaaagtgctgatgttgtgttatccaccaacacaggtgcttgtgacgatggcccactgaag
ttcctgcccgcagagcattttgattgggtggtgatagatgagtgtgctcaggccctggag
agtagctgctggattcccctgctcagagcacataagtgtattctggctggtgactacaag
cagttaccacctacaatcaaatcacacaaagctgcatcaaaaggcttgtctctcagtctc
atggagagacttattcagatgtatggggactcagtagtccgtatgctgacagttcagtat
cgcatgaacagtgccattatggactgggcgtcgaaagagatgtaccagggaagactgact
gctcacagttctgtggagagacatttattaaaggatttaccaggagtgacctgcgttgaa
gaaacaaacacaccactccttttgatcgacactgcaggatgtggtctgagtgagatggag
gtcacagacgagcagtccaaaggcaatcaaggtgaggttgacattgttgatctgcacata
aaggccttgacagaagctggtgttaaagccaaagacattgcagttattgccccatacaat
ttacaggttgatctcctgcgtcagaagctgtcaacgagacaccccgagctggagattaag
tcagtggatggattccagggcagagagaaagaggctgttgtgttgtcgttggttcgatcc
aacagaaaaggtgaagttggctttctggcagaggacaggagaataaatgttgctgttaca
cgtgcgagacgccacattgctgtagtgtgcgactcacagaccgttaagaatcatgctttc
ttgaagtccctgatcgatcacgtcaccgagtttggtgagaccagaacggcttttgagtac
atccaagatatcgtgccacagaactacagtcgtaaccacagagacgcaacaactaaaatg
tctgccagcagctcaacatccaccaaacaaaaagtcagagctcaagctcccaacaacaca
aagcaaggacagaaaaagtcaaccaataacggcaaagaaaatactgcttgttcagagaag
cgcacaaaaccccgcacgtcatcagagaatgaacagaacaagaacagagacgctgagatc
agagagcaagtggagaaatttctgaaggacttgaatcagtttgaactacaattcccatca
tcctttaactctcatgatcgcttgttagtccacaagattgctgaggaactgtgcctcgtg
catgagagcaaaggtgaagggaaagacagatgcatcactgtctccaggcccctgaagatg
gcaccagctgtggagactgcacaaaaagaagaagaagcagaggaggaggaggaggaggag
gatacgattccaaatccccaaagagaaccacagagtcaacctctgttagatttgaaaagt
ttacatttggagcgaatgaagcgggagcaacagagaagagaagaaaatgcccaacagaaa
aaacagcacaacaacaacatcccagcagctcagactcagtcatctaagaaggccaaagga
aaaaaacgcacaaaggcaggcgcctgcgacattgcagctgctgctgctcccgaagatgac
tttgacacacttatcggtgctgtgatgaaagcagacagtgtgtgtagttttgtcaagtgt
aaagcatctgtgctaacccttggacagctttgcattttctgcaacagacagtactgtctc
agtcatcatataccggaggttcacggctgcggagataaagccaagtctcatgctcggatg
agaataagtaaagaaggcgttctctatgcgggcagtgggaagaaggacaaatccatggat
gtgaataagaaagcttatttgcaaagaaaactggattctaaattgaaagacatggaatca
aagaggaaaccaaaaagcaaagaaaaggacagttaa
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integrated database retrieval system
