Solea senegalensis (Senegalese sole): 122760975
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Entry
122760975 CDS
T07721
Name
(RefSeq) dmX-like protein 1
KO
K24155
rabconnectin-3a
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122760975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122760975
Membrane trafficking [BR:
ssen04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122760975
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
122760975
RAVE complex
122760975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_EML
Beta-prop_WDR19_2nd
Beta-prop_IP5PC_F
Beta-prop_DCAF4
DUF688
Beta-prop_Vps41
PBP1_TM
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
122760975
NCBI-ProteinID:
XP_043872123
LinkDB
All DBs
Position
Unknown
AA seq
2278 aa
AA seq
DB search
FDCSFRCSIQQGKETQLLHVFEEDLILGSQRTESTQDPPDLHHDASSEATFSARFFLVVV
EVTPKGRSLLHMWHLHLAAQPIIMEETKTETPMNSSHFDFDTFSSPVTQRSKTCTSNLQS
ACRLNLTTHTLYSQEMVLPEGVEIISVTPSAGHLSASCSLPAGRVPYLLATSCSDGKVRF
WRCNVVATEPFSIDCLSYQWEEWPLLVEERLPSSSEISVPGRPVEVSCCHTGRFAVAYRQ
TPNAHLKSTPHLNYQGVLISSPAQASSPYNTHLAPSLTLPHSLNSTLSPNQANSREPMVY
IGIFQCESTGGSQWILEQTIVLDSTDSTASYGISSSTSGSASSPSNMDFSLPIENCSGST
SRSLVHLDWVSQEDGSHILTVSIGTKIYMYGRLAGKPPDLCLSSDASKEQSLSRLVLLRS
VDLVSSVEGSLPIPVSLSWVRDGILVVGMDCEMHVYSQWQPPTPPKASAAIAQDTDIGSS
VSSIVSAVRQSQEDGLNPGASLAPPKKAFSRSMMSLAQKLRGKRTAYDPPVEMEDSGLFE
AAHKLFPTLPQYHPVQLLELMDLGKVHRAKAILSHLVKCIAGEIVPLKDSNTNPERRVRS
RTIGAGGSTARDPKMFSIAESSTPGYTEISSIPPLPLYALLAADEDTSTKHDKVGSVSGD
SGHGSSQTDAYDELFHTPSIADLDPLNNNQEETGNKVIDLSQYSPTYFGPEHAQVLSSHL
LHSSLPGLTRLEQMSLMALADTIATTSTDLNDSQDKSKGGETLDECGLKFLLAVRLHTFL
STSLPPAHRAQLLRQGLSTCHYAWAFHSEAEEELLNMLPALQKGEPTWPELRSMGVGWWL
RSNNKLRRCIEKVAKASFQRSNDPLDAAIFYLALKKKAVIWGLYRSQKNAKMTDFFHNNF
SEDRWRKAALKNAFSLLGKQRFLHSAAFFLLAGSLKDAVEVCLEKLHDLQLALVISRLYE
SEFETGSTYKKILQRHILGQDKQIQAHQDSFLRSMAYWVLEDYSKALDTLLEHGTNRNSS
GTPESKCEAGSSFVSTSNPEVFNFYIYLRTHPLLLRRHFCSSDNAKVSLTAEGRRADSIS
LEERRLFFTAAYAHLQAGCPMLALEILSKMPKVHRHSRLQNQEDTGISAELSVGSKEGQT
SDPDWSQPCLNGYESDGNSLSISKSDSLLSFDWSQPSLTIPDEPLELKWDSDKDEDEEES
EEEIKNAKTGIIADSSSVFQDTQDAMSPLMETVMEDDSENSNDFIAPSDDVLVAQLKFTA
CLKIMTNELRTLSTGYEVDGGKLRYQLYQWLEREVVALQRCCSYKPCLSDLSVLGDASVF
GLVEEEQLGSPRSDSQRSRRHWLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQE
SHQDDSIQSVVTSSSQPNAIPLLMACTANVKTVVANPMVYLTNLTHDILQTIIALDSPPH
PDVVNNEIYVMHTLAASLSACIYQCLCDRHTYSHVNHFTGIVYQSVLLTQKQPVRAVSVD
ESVLPNTSPAQWPGIASLVRLLSSAGEESQPGLTVLLCEILTAVFLSLFVHGMATHSSQE
LFRVMAHPLNSKLWVTVFGGGARTPVIEKLNSPTRTPPPASPSASDKKSRRFRLLPSRSG
SKEESGIEREGPSSPKHVPVVEQEAPSIFKERFVPPELSIWDYFIAKPLLPPSENRIRYD
SEESQGSQDEDDDDDDYEDVFDSNSPKREHSNHNSYSWCLMRLAMVQLVLVNLKSFYPMA
GYDLLDLPVGSPLCHAVLRTLQRWEQVLQKRLEIFGGPPSRYIPTHLQDETATPGPALLR
HKALFEPSNTPFRTSHHSALPVKRLWQFLVKQEEVQETFIRNIFTKKQDPNELVVDQSDN
MKYSGMDVTGNNQTESDLDSPGGKARIIHKESDIITAFAINKANRNCLVMASTHDIQELD
VSSILATQILTWIDDDDAEAKGVGGDDFLVIHTRDDFAALHGTTPYTHSSPGTPINMPWL
GGLQTGRGAAMMIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGN
SRVTRIRFNHQGNKFGIVDADGGLSLWQTNTSGNAPKPFLTLQCHNKTAHDFVFVGSSSL
IATAGLSTDNRNVCLWDTLVTPANSLVHAFCCHESGATVLATAPRQQLLITGGRKGWISV
LELPHRHQRQSFQAHDSPVKALAVDVIEDFFISGSAEGNIKVWSLATQCVLFSFPNEHAR
QSLFRNLGTGVMQIEVGPANHIFSCGADGTMKMRVLPNRFSVVNNNRGNLKNDVKFFI
NT seq
6837 nt
NT seq
+upstream
nt +downstream
nt
tttgattgtagcttccgttgttcaatacagcaggggaaggagacccagctcctacatgtc
tttgaggaagatctgatccttggcagtcagagaacagagagcacacaggaccctcctgat
cttcatcatgatgcctcaagtgaggcaaccttctcggctcgatttttcctggtagtggtg
gaagtaacaccgaaagggcgctcactcctccacatgtggcatctccatcttgctgctcaa
cccattattatggaggagaccaagacagaaactcctatgaacagctctcactttgacttt
gacacattcagttctccagtcactcagaggagtaaaacctgcacttccaatttgcagagt
gcttgtcgcctcaacctcactacacacacactatacagccaagagatggtcctgccagaa
ggggtagaaattatcagtgttacgccctcagcaggtcacctgagtgcatcttgttctctg
ccagctggccgtgtgccttatctccttgctacttcctgttccgatggaaaggtgcgcttc
tggaggtgtaatgttgtggcgacagagcctttcagtatagattgtttgtcataccagtgg
gaggagtggccactcctggtcgaggaaaggcttcccagcagcagtgaaataagtgtgcca
ggtcgccccgttgaggtcagctgctgtcacactggaaggtttgcagttgcctataggcag
acaccaaatgcacatctgaaatccacacctcatttgaactatcagggagtgttgatttct
tctcctgcacaagcttcctcgccctataacactcacctggccccaagcttgactctacca
catagcctaaattccactctaagccccaaccaagcaaacagtagagagcccatggtttac
attggcattttccagtgtgaatccacaggtggttcacagtggattttagagcagaccata
gtcctcgacagtacagattccacggctagttatggcattagcagcagcacaagtggaagt
gccagtagtccaagtaacatggacttttctttacctattgagaactgctcaggttccacc
agtaggagcctggttcatttggactgggtgtctcaagaggatgggtcacatattctgact
gtcagtattgggacaaagatttatatgtatgggcgccttgctggaaagcctccagacctg
tgtctgtcatctgatgcaagtaaggaacagagcttgtctcgcctagttttgcttcgttcg
gtcgatctggtctcttctgttgaaggttcattacccatcccagtctctctttcctgggta
cgagatggcatcctggtcgtcgggatggactgtgagatgcacgtttactcccagtggcaa
ccaccaacaccacctaaagccagtgctgccatcgcccaagacacagacattggcagcagt
gtctcctccatagtctcagctgtcagacagagtcaggaggatgggctcaatcctggggct
tcactagctcctcccaaaaaggcattttcaaggtcgatgatgagtctggctcagaaactc
cgcgggaagagaacagcttatgacccgcctgtagagatggaagattctggactttttgaa
gcagcacacaaactctttcccactcttccccagtatcatcctgtacagttactggagctc
atggatttagggaaggttcaccgtgccaaagccattctctctcacctcgtgaaatgcatt
gctggggaaatagtaccacttaaagacagtaacaccaatccagaaagacgcgtgcgctct
cgaaccattggtgctggaggcagcacagccagggatccgaaaatgttcagcattgctgag
agctccacccctggctacactgagataagttccatccctcccctgcctctttatgctctt
ctggcagctgatgaagatacatcaacaaaacacgataaagtgggcagtgtaagtggggac
agtggacatggttccagccaaacagatgcttatgacgagctctttcatacacccagcata
gcggatctggatcctctcaacaataatcaggaggaaacgggcaacaaagttattgacttg
tctcagtacagtcccacatactttggtccagaacatgcacaggttctgtccagccacctc
cttcactcgagtttgccaggactaactcgtctggagcagatgtctctcatggcgttggcc
gacaccattgctacaacaagcacagacctcaatgacagccaggacaagagcaaaggtggc
gagacactggatgagtgtggtctgaagttcttactggccgtcagactgcataccttcctc
tctacctccctgccaccagcacaccgagcacagctgctacggcaaggcctgtcgacatgt
cactatgcctgggcctttcactctgaggctgaggaggagctgttgaatatgctccctgcc
ctacagaagggagagcccacctggcctgagctgcgctccatgggtgtgggctggtggctg
cgcagcaacaacaagctacgcaggtgtattgagaaggttgccaaggcttcttttcaaaga
agcaatgatcctctggatgcagctatattctaccttgcgctgaaaaagaaagcagtgatc
tggggattgtacaggtcccagaagaatgccaaaatgactgacttcttccacaacaacttc
agtgaggacaggtggaggaaagcagcattgaaaaatgctttttcacttttgggaaagcag
cggttcttacattctgcagccttctttcttcttgccgggtccttaaaggatgctgttgag
gtgtgtttagagaaactgcatgacctgcagctggctctggtcatctccagattgtacgag
tctgaatttgagacgggatccacctacaaaaagatccttcagagacacattctgggtcaa
gacaaacagattcaagcccaccaggactcgttcttgcgcagcatggcttactgggtcctg
gaggactacagtaaagcattggacactcttcttgagcatggcaccaacagaaacagctct
gggacccctgagagcaaatgtgaagctggttcctcttttgtgtctacaagtaaccctgaa
gttttcaacttttacatctacctccgtacccacccacttctccttcgccgccatttttgc
tcttccgacaatgctaaagttagtttgactgctgagggtcgaagggctgactccattagc
ctggaggagaggaggctgtttttcacagctgcatatgcccacctacaagctggctgcccc
atgctagcacttgaaatcctctccaaaatgcccaaagttcataggcattcacgactccag
aatcaggaggatacaggaatctccgctgaactcagtgttgggagtaaggaaggacaaacc
tcagacccagactggtctcagccatgtctgaacggctacgagtccgatgggaacagcttg
tcaatcagtaaatcagattcgttgttaagtttcgactggagccagccttcactgacaatt
ccagatgagcccctagagctgaagtgggacagtgacaaagacgaagacgaggaggagagc
gaagaagaaattaaaaatgctaagactggtataattgcagacagcagcagcgtgttccaa
gacacgcaggatgccatgtcaccactaatggagacagtgatggaagacgacagcgagaac
agcaacgacttcattgcaccgtctgatgacgtcttggtggcccagctgaagtttactgcc
tgcttgaagattatgaccaatgagctgcggacactgtcaacagggtatgaagtcgatggg
gggaagctgcgctaccagctctaccagtggttagaaagagaggtggtcgctctccagcgt
tgctgcagctacaagccctgcctgtcagatctgtctgtcctgggtgatgcctctgttttt
gggttggtggaggaggagcagctgggtagccctcgtagtgacagccaaaggagcaggaga
cactggctgcagagtaaccagcctttgctcaggatgttcctcagctactgcagcttgcat
ggctcccacggtggaggactggcttctgttcgcatggagctcatactgttgcttcaggaa
tctcaccaggatgactctatccaatctgtggtgacatccagttcccagcctaacgctatc
cctcttctcatggcgtgcacagccaatgtaaagaccgtggtggccaatcccatggtgtac
ctgaccaacctgactcatgacattttgcagaccatcattgcactcgattctcctccacac
cctgatgttgttaacaatgagatttacgtgatgcacaccttggctgcttccctatccgcc
tgtatatatcagtgtctatgtgacagacacacctacagccatgtgaaccatttcacgggc
attgtttatcagagtgttttgctgactcagaagcagccagtcagagctgtcagcgtggat
gagtctgttctgccaaacacttctcctgcacagtggccagggatcgcttctctggttcgc
ctgttgagctcagcaggcgaggagagtcagccaggcttgactgtgctgctctgtgagatc
ctaacggctgtattcctcagcttgtttgttcacggcatggccactcactccagccaagag
ctgtttcgcgtgatggcccaccctctcaacagcaagctatgggtgacagtgtttggagga
ggagcacggactcccgtcatagagaaactcaacagcccaacaaggacacccccaccagcc
tctcctagtgcctctgacaaaaagtccagacgattcaggcttctgccgtcacgcagtgga
tccaaagaggagtctgggatagagcgggagggaccatccagtcctaaacatgtccctgta
gtggaacaagaagctccctccatctttaaagaacgatttgttccaccagagctcagcatt
tgggattactttattgccaagcctttgctgccaccatcggaaaacagaattaggtacgac
tctgaggagagccagggcagccaagatgaagacgacgatgatgatgactatgaagatgtg
tttgactccaactctccaaaacgagagcattcaaaccacaattcatacagctggtgttta
atgcgtttggcaatggtgcagctggtgttggtcaacctgaagtccttttacccaatggca
ggatatgatctattagacctgccagtgggctctcctctgtgtcatgctgtcctgaggact
cttcaaagatgggaacaggtgttgcagaaaaggctggagatctttggggggccaccttcc
agatacatccccacacacctccaggatgaaacagccacacctggccctgccttgctgaga
cacaaagccctgtttgaaccatccaacacaccattcaggacatcccaccattcagcgctg
ccagtgaaacgcttatggcagttcctggtaaagcaggaagaagtgcaggagaccttcatc
agaaatatctttaccaagaaacaggacccaaatgagttggttgtggaccagagtgacaat
atgaaatattcagggatggacgtgacaggaaacaatcagactgagtcagatctggacagc
cctggaggaaaggcacgcatcatacacaaggaatcggacatcatcacagcctttgccatc
aacaaggcaaatcgtaattgtttagtcatggcctccacccatgacattcaggagctggac
gtgtcttccattttggccacacagatcttgacatggatagatgacgatgacgctgaagcc
aaaggtgttggaggcgatgacttcctggtgatccatacacgtgatgactttgctgccctt
catggcaccacaccgtacacccacagcagccctggtacacccatcaacatgccatggctg
ggaggtctgcagacaggaaggggtgccgccatgatgattaagagaaacatcaataatgtg
agaagaatgacctcgcatcccacactaccttactacctgacgggagctcaggatggtagc
gtcaggatgttcgagtggggtcactcccagcagatcatctgcttcagaagtccaggaaac
tccagagtcacccggatacgattcaaccaccaaggaaacaagtttggtatcgtcgatgct
gacggtggtttgagtctgtggcagactaacaccagtgggaatgcccccaaaccattcttg
acattgcagtgtcacaacaagacagctcatgactttgtctttgtgggctcctcctccctc
attgccactgcaggtctttccacagacaacaggaacgtgtgtttgtgggacactctggtg
actcctgctaacagcctcgtacatgctttctgctgccatgagtcgggtgctaccgtcttg
gcgacggcccccaggcagcagctgcttatcacaggtgggaggaaaggttggatcagtgtc
ctggagcttccccacaggcaccagcggcagagtttccaggcccatgactcaccggtcaaa
gcactggctgtcgatgtaattgaggacttctttatcagcggatcagcagagggcaacatc
aaggtttggagtctggccacacagtgtgtcctcttctccttcccaaacgaacacgctcgc
cagtcgctgttcaggaacctcggcaccggtgtgatgcagatagaggtgggaccggccaat
cacattttctcctgcggcgcggacggaacgatgaagatgagggtcctgccgaaccgcttc
agcgttgtcaacaacaaccgcggcaacctcaagaacgatgtaaaattcttcatatag
DBGET
integrated database retrieval system
