Solea senegalensis (Senegalese sole): 122761172
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Entry
122761172 CDS
T07721
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p100 subunit-like
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04010
MAPK signaling pathway
ssen04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122761172
Transcription factors [BR:
ssen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
122761172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
122761172
NCBI-ProteinID:
XP_043872280
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MAGALRMTEAQFINVYDSDLQLNLMPYDYIPPVDIKTEPYIPETAHGPYVQIIEEPKQRG
FRFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVTHTDPPQVHAHSLV
GRHCTEKGTCTLDVGPNDLTASFSNLGILHVTKKGVVDILYKRLRDERKRQKGAHCTLTD
DEDTSCLKEAKELGKVMDLNIVRLKFTAFLQDSNGGFTRALKPVVSNPIYDSKSPNASNL
KISRMDKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGGWEAFGDFSPTDVHKQYAI
VFKTPPYHSTEIERPVTVFLQLKRKKAGDSSDPKQFTYIPQVQDKEEVMRKKQKPLPHYE
TWRGGGGAGGFGGGGGGGGGAGGGGGGGFQFNQQMNGGGGVFFTGGFTGFGGGGGSQMSG
SAPQTGSQLQQQLFQIATTLHSRASTSARNTAAALLEYCSTGDARVLLAIQRHLCGVQDT
NGDTPLHLAVIHQQTSVVQQLIHTLLSSEQRRILNTANNLRQTPLHLAVITRQVKVVEAL
LRAGADPSLTDQHGRSPLHLAALAGDNAAVRLLLAHLGESHAHLVNTPDYDGLHPLHLAV
KRDAERCLRLLVEGGAKINAPEQKSGNTALHLAVREDLFKVACTLITELKADVNACTFGG
NTPLHLAAALGSPTLCSMLIAAGQ
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcgctgaggatgactgaagctcagttcatcaacgtctacgacagcgacctg
cagttgaatctgatgccgtacgactacatccctcctgtggacattaagacggaaccgtac
atacctgagacagctcatggtccatacgtccagatcatcgaagaaccaaaacagagggga
tttcgtttccgttatgagtgtgagggtccgtctcatggtggtttgcccggtgcctccagt
gagaagaacaggagaacatatccgactgtaaagatcaacaactacgtgggtcacgctcgg
gtcgaggtccagctggtgacacacacagatcctccacaagtccacgcccacagcctggtg
ggacgccactgcaccgagaaaggcacctgcacgctggatgtcggccccaacgacctcacc
gcctcgttcagtaacctcgggattcttcacgtgaccaagaaaggtgtcgtcgatattttg
tacaaaagactgagagacgagaggaagcgacagaaaggagcgcactgcacactgacagac
gatgaggacacctcgtgtctgaaggaggcaaaggaactggggaaagtgatggacctgaac
atcgtcaggttaaagttcaccgccttccttcaggacagtaacggaggattcaccagagcg
ctcaaacctgtcgtctccaaccccatctatgacagcaagtctccgaatgcgtccaacctg
aaaatctctcggatggacaagacgtgcggctctgtgctcggaggagacgagatcttcctg
ctctgtgacaaagtgcagaaagatgacattgagattcgcttctatgaggaggacgacgag
ggcggctgggaggcgttcggagacttttcacccaccgacgttcacaaacagtacgccatc
gtgtttaagacgccgccgtatcacagcacagagatcgagcgtcccgtcaccgtcttcctg
cagctgaagaggaagaaggccggcgacagcagtgaccccaaacagttcacttacatccca
caggtccaagacaaagaggaagtgatgaggaagaagcagaagccactgccgcactatgaa
acctggagaggaggaggaggagccggggggttcgggggaggaggaggtggaggaggcggg
gctggaggaggaggaggaggaggatttcagttcaaccagcagatgaacggagggggagga
gtcttcttcacaggaggcttcacaggtttcggcggagggggagggtctcagatgtcaggc
tctgcccctcagactggttcacagctgcagcagcagttgtttcagatcgcgacaacgctt
cacagtcgagcatcgacgagtgcacgaaacactgccgccgccctgctggagtactgcagc
accggcgacgcccgagtcctcctcgccatccaaagacatctgtgcggcgtccaggacact
aacggagacactcctttgcacctggccgtcatccaccagcagacgagcgtcgtgcaacag
ctgatccacactctgctcagcagcgagcagcgccgcatcctcaacacggctaacaacctg
cgacagactcctctccacctggccgtgatcacacggcaggtgaaagtggtggaggcactg
ctgagagcgggggcggaccccagtctgacagaccaacatggccgcagcccactccatctg
gcggcgctggccggagacaacgccgcggtccgccttctactggctcacctgggagaaagc
cacgcccacttggtcaacacgcctgactacgacggtctccaccccctgcacctagcggtg
aagagagacgcagagcgctgcctccgcctactggtggagggtggagccaagatcaatgca
cctgagcagaagagcggaaacacggcgctgcacctggccgtcagagaagatctgttcaag
gtggcgtgtacactcatcaccgagctcaaggccgacgtcaacgcctgcacgtttggagga
aacacgccgctgcacctggccgccgctctgggttcacccacgctctgctccatgctcatc
gccgcaggtcagtga
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