Solea senegalensis (Senegalese sole): 122761254
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Entry
122761254 CDS
T07721
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
ssen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122761254 (srrm1)
03015 mRNA surveillance pathway
122761254 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122761254 (srrm1)
03041 Spliceosome [BR:
ssen03041
]
122761254 (srrm1)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122761254 (srrm1)
Spliceosome [BR:
ssen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
122761254 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
DUF2457
Motif
Other DBs
NCBI-GeneID:
122761254
NCBI-ProteinID:
XP_043872375
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTGIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLDGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKMDEDKKEKDTRERAQSKSPRRRKTRSPSPRRRSP
VKRERKRSPSRSPRRKPSPVGGSSPPPPLMQLPTKPVEPIVEPDTSGQALPEPVVQEASS
TCDIVVEVVKADSQQVTEVKEPTPEKTQKKEERPRSREREKESRRERPHHRSRSHSRSRR
RRSRSRSYSPRRRPSPRRRMSPRRRSPPRRGPTNSRHRHRRSPPRRRRSRSASSSGSSSS
GSGSAKKAAKRLSNTPPRKPLHHRDASISPAGKDRRSPSPRARRGRASASPPRSGLKQKA
GGRGDSPFKPRHSDRSESEEDKNEKGATADSVQQRRQYRRQNRQSSSDTGSSSSEDEAPK
RPAAGPGARNGEVRRRRSRTPSPRRRHRDPSPRKRRSPSPGRRRRTPSPPRRRRSPSPPR
RRSPSPPPRRRSPSPRRYSPPIQRRYSPSPLPPQRRKLSSSPAKRSSPVAKRHSSRSPKR
RSSPPHRRRSPPRSSPPRHRRSPMLPSSWQSRDTRSPAAEAHRMSPSPVNRGRAVRSSPS
PQGRFETSSTSPSNHRRQQSPSHSGKPIRRVSRTPEPRSNQRSSPSPQPMRRASSRSRSV
SPQPAAHKRPVAKSASPSPAHSASGSPPAAKKARSVSGSQSPSKNSDIDGSGKKKKKKKE
KKHKKHKKEKKHKKHKKEKTGATGAGDGQENQVVEEDGDSRKESESEVDDSLDDLEKHLR
EKALRSMRKAQLSP
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggcacaagtgcggagcaagacaaccgtttcagcaacaag
cacaagaaactgctcaagcagctgaaatttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctggaagtcatcaaaccttggattactcaacgggtgactgggattctg
gggtttgaggatgatgtcgtcatagagttcatatttaaccaactcgaggaaaagcacccg
gatagcaagatgatgcagatcaacctgacaggttttctggacggaaagaatgcccgggag
ttcatgaaggacctgtggcccctgctgttgagtgcccaggagaacattgctggcatcccc
tctgcttttctggaacagaagaaagaggaaattaaacagagacagattgaacaggagaag
ctagcttctcttaagaagatggatgaggataagaaggaaaaggacaccagagagagagct
cagtcaaaaagtccaagaagacgaaagacaaggtcgccatccccacgacgaaggtcgccg
gtgaagcgggaaaggaaacgcagcccatctcgctccccaaggcgcaaacccagtccagtt
ggtggcagttcaccacctccaccgctgatgcagctgcccacgaaacctgtggagccgatc
gtggaacccgatacatcaggacaggccctgcctgaaccagtggttcaagaagcttcttcc
acctgtgatatagttgtggaggtggtgaaagcagactcacagcaggtcacagaggtcaaa
gaacccactccagagaaaacacaaaagaaagaagaaaggccccggtctcgagaaagggag
aaggaaagcaggagggaaagacctcatcaccgatcccgttctcattcccgttctcgcaga
cgacgttctcgttctagatcttactcccctcgtagaagaccaagtcccaggaggaggatg
tctcctcgtcgcaggagtccccctcgacgtggtcccaccaactccagacacagacacaga
cgctccccacctcgcaggaggcgctctcgctctgcttcatcctctggcagcagctcttca
ggctctggctcagctaaaaaagctgcgaaacgactatcaaacacacccccccgaaaaccg
ctgcatcacagagatgcctccattagccccgcagggaaagacagacggtcgccgtctccc
agggccagaagaggacgggcttcagcttccccacccagatcgggtttaaagcagaaagca
ggaggaaggggtgattctccttttaagcctagacattctgacaggtctgagtcagaagag
gataaaaatgaaaaaggggcaacagcagattcggtgcagcagcgacgtcagtatcgcagg
cagaatcgacagtcgtcttcagatacagggtcttcctcctcagaagatgaagcccccaag
aggcctgcagcggggcctggagccagaaacggtgaagtcaggaggagaagaagccgcaca
ccttccccaaggaggcgacacagggatccatctccaaggaaaaggcgttctccatctcct
gggcgcagacgccgcaccccttctcccccacgacgccgcagatccccctctcctcctaga
cgcaggtctccttccccacctcctcgccgacgatctccatctcccagacgatattcgccc
cctatccagcgtcgctacagcccctcacctttgcctccacagaggaggaagttgtccagc
tcacctgcaaagcgctcctccccagttgccaagcgacattcctccaggtctcccaagcgc
agaagttctcctcctcacaggagacgttcaccgccacgctcatcgccacccagacacagg
aggagtcccatgttaccgtcaagctggcaaagcagggatacacgatctcctgctgcagaa
gcacaccgcatgtccccatcccccgtaaaccgtggtcgcgctgtcaggagttcccccagt
ccccagggtcgttttgaaacctctagcacatctccatctaaccatagaagacaacagtcc
ccttcacacagtggcaaacccatccgcagagtgtcacgcaccccagagccgcgtagcaac
cagagatcctctccaagtccccagcccatgagaagagcatcttccagatctagatccgtt
tcccctcaaccagcagctcataagcgtccagttgcaaaatctgcctccccttcaccagct
cactctgccagtggttccccaccggcagctaaaaaggcccgcagtgtttctggcagtcag
tctccaagcaagaattctgacattgatggcagtggaaagaaaaagaaaaagaagaaggaa
aagaaacacaagaagcacaagaaagagaagaaacacaagaagcataagaaggagaagact
ggtgccactggtgctggagacggacaagagaaccaggttgtggaggaggatggcgactca
agaaaggaatcagagagtgaagtagatgacagcttggacgacctagagaagcacctaaga
gagaaagccctgcgatccatgaggaaggctcagttgtctccataa
DBGET
integrated database retrieval system
