Solea senegalensis (Senegalese sole): 122761324
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Entry
122761324 CDS
T07721
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122761324 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122761324 (smg7)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
122761324 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
122761324 (smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
122761324
NCBI-ProteinID:
XP_043872452
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MNLCAQLLRQAEALKADMTDSKLGVAEVWTSRQALQDVYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV
KSSQLGIISNKQDGGGTIVKPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVK
TKWSVSDFIKSFIKFHGHVYLSKSLEKLDSLRERLEDQFQRLILQKAFSSQQLVHITVIN
LFELHHLRDLNTDGEQSYSSEQQLSWFQLLGLFMSFLGVMCSRVLLNKSRGEEVMGECPL
PAVKVSLDWLRLRPSVFHEAAVHQRQHVWPWLVSILNGFHPKEDNVSSSSVCVFVSSTVT
PLPEEFELQGFLALRPALRSLDFTKGHQSILVDRAGPLVHARHQRLISLGKWVADNQPCL
IQYRVIEDGLLLFITDIPEQAIEEPQEKEMPVLQESSNGEQTPSDGGNSGLKSVLSVGKT
QNSWPDSSDRPVVTFKENIKPREQSREMTRSHLQKDGVKERRDFTKGNGAAGKAEPKRDG
KRKSDPKKGAHEKTSDAGKQVKAQTELRKTPVSEAKKMPVTQTQTTCSSQFIPIHHPGAF
PPLPSRPGFPPAYVIPPAVAFPGLQVNPGFTFSTGVSVPGPFLQPAVHAQASTQVQAGKQ
SHIPYSQQRPSGPGLGPGPGSSGGMSQSPSQSQQPQSQPSSQQPLQQSVQSPTKPVQQQQ
VGMGKSPPHLPALQQYMQVQDWSQAQAALQKLSPIPVSMKQQQQQQQQQQQQQQQQQQQQ
QQQQQTFYMAAQDPLKLYEHQPPPPLSNMDKKIKYADVKMQDFYWEPSYRMGDGLAVMAD
RMKRPLGGMCSEQDAPPTGPRGQQYEDNKSSPLLPPDLLKTLADFEEEDELVFSKPPDFF
QAMAAPLSSAPGPNIFLSNQTRMDSGPEVVGQSSSLLPMSGFPMQEYNQNSIFSQAYGKN
LPPSAKPEVPMMHQEPSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTH
NHGATPFSNFGPIGTPDSRDRRVMDRWKADKTGAVSGFGLDYLPATASTAASDTSWHQTG
PGGSSWTNQESPMEESSSTVLLDSLKSIWSSSMMQPGPSALEQLLLQQKQKQQRGHSAMN
PPH
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgtgctcagttgctccgacaggcagaggccctgaaggctgacatgacagat
tcaaagctgggcgtggcagaggtgtggacgtctcgccaggctctgcaggacgtctaccag
aagatgctggtcactgacctggagtacgctctggacaagaaggtggagcaggacctgtgg
aaccatgcttttaagaaccagatcaccacactgcagagccaggccaagaaccgagccaac
cccaaccgcagcgaggtccaagccaacttgtcgctgttcctggaggcagccagtggcttc
tacacacagttactgcaggagttgtgcactgtcttcaacgtggacctgccttgtcgcgtc
aagtcgtctcagctcggcatcatcagcaacaaacaggacggtggcggcaccatcgtcaaa
cctcagcccagctcctgctcctacatctgccagcactgcctcgtccacctcggagatatc
gctcgttatcgtaaccagaccagccaggcggagtcgtactaccgtcacgcagctcagctg
gtcccgtcaaatggtcagccgtataaccagctggcgatcctggcctcgtctaaaggagac
cacctcaccaccatcttctactactgccgcagcatcgcagtgaagttcccgttccccgcc
gcctccaccaacctgcagaaggcgctgtccaaggctctggagagtcgtgacgaggtgaaa
accaagtggagcgtctctgatttcatcaagtccttcatcaagtttcacggtcatgtgtac
ctgagcaagagtctggaaaagctggactcactgagggagagactggaggaccagtttcag
aggctgatcttgcagaaagccttcagttctcagcagctcgtccacatcacagtcatcaac
ctgtttgagcttcaccacctcagagacctgaacactgacggagagcagagctacagcagt
gagcagcagctcagctggttccagctgctcggactcttcatgtccttcctgggcgtcatg
tgcagccgtgtcctgctcaataagagcagaggagaggaggtgatgggggagtgtcctctg
ccggccgtcaaagtgtccctggactggctcagactgagacccagcgtcttccacgaggct
gccgtccaccagaggcagcatgtttggccgtggctcgtctccatcctcaacggttttcat
cccaaagaagacaacgtgtcctcgtcctcagtatgtgtgtttgtttcctccacagttaca
ccgctgcctgaggagtttgagctccagggattcttggctctccgacctgctctgaggtct
ctggacttcaccaaaggtcatcagagcatcctggtggacagagcaggcccgctggtccac
gcccgacaccagagactcatcagtctgggtaaatgggtggcggacaaccagccatgcctg
attcagtacagagtcattgaggacggcctcctcctctttatcaccgacattcctgagcag
gccatcgaggagccgcaggagaaggagatgccggtgctgcaggagtcgtccaatggcgaa
cagacgcccagcgacggcgggaactccggtctgaagtcggtgctgtcggtggggaagacg
cagaactcgtggcccgacagcagcgacagacccgtcgtcaccttcaaggagaacatcaaa
cctcgagagcagagccgggagatgacgcggagccaccttcagaaagacggcgtcaaagag
cgccgggacttcaccaaaggcaatggcgcggctgggaaagcagagccgaagagagacggg
aagaggaagagcgatccgaagaagggcgctcatgagaaaaccagcgacgcaggaaaacag
gtgaaggctcagaccgagctgaggaagactccggtgtctgaggccaagaagatgcctgtc
actcaaactcaaaccacctgctcatcacagtttatccccatccatcatcctggagccttt
cccccactgcccagcagaccaggtttccctccagcgtatgtgattcctcctgctgtggcg
ttcccggggctccaggtgaatccaggcttcaccttctccaccggagtgtccgtccctgga
cctttcctccagccggccgtccatgcccaggccagcacacaggtgcaggccgggaagcag
tcccacattccctatagtcaacagaggccctccgggccgggtctgggtccaggtccgggg
tcttcgggtggcatgagccaaagcccctcccagagtcagcagccgcagtctcagccctct
tcccagcagcctttgcagcagtcagtgcagtctccgaccaaaccagtgcagcagcagcag
gtggggatggggaagagtccacctcacctcccggccctgcagcagtacatgcaagtccag
gactggagtcaggctcaggcagctctgcagaagctcagccccatcccagtgtccatgaag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cagcagcagcagcagaccttctatatggcagcacaggatcctctgaaactgtacgagcac
cagccgcctcctccgctctccaacatggacaagaagatcaagtacgctgacgtgaagatg
caggacttctactgggagccgtcctacaggatgggcgacggcctcgctgtcatggccgac
aggatgaagaggccgctgggcgggatgtgctcggagcaggatgccccgcccactgggccc
cggggacagcagtatgaggacaacaagagctcgcctcttctccctcctgacctgttaaaa
actctagcagattttgaggaggaggacgagctcgtcttttctaagcctcctgatttcttc
caggccatggctgctcctcttagctctgctcctggaccaaatatatttctgtccaaccag
acgaggatggacagtggtcccgaggtcgtaggtcaatcctcttccctcttgcccatgtct
gggttccccatgcaggagtacaaccaaaacagcatcttcagtcaggcatacggtaagaac
ctgccgcccagtgccaagcccgaagttcccatgatgcaccaggagccgtcgctctactct
ttgtttgaagggactccgtggtcaccctctctccccgccagctcagatcactccacccca
gccagccaatcccctcactcctcgaaccccagcagcctgccatcgtccccgcccacacac
aaccacggagccacgcccttctctaactttggacccatcggcacgccggacagccgcgac
cgcagggtgatggaccgctggaaggccgacaagaccggtgcggtcagtggcttcggtctg
gattatctgccggccacggcctccactgctgcgtccgacaccagctggcaccagactgga
ccaggcggcagctcctggaccaatcaggagtctccgatggaggagtcgtcctccactgtg
ctgctcgacagcctcaagtccatctggtccagttccatgatgcagcctggcccgtcagcg
ctggagcagctcctcctgcagcagaagcagaagcagcagcgaggtcacagcgccatgaac
ccgcctcactga
DBGET
integrated database retrieval system