KEGG   Solea senegalensis (Senegalese sole): 122762125
Entry
122762125         CDS       T07721                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen04137  Mitophagy - animal
ssen04144  Endocytosis
ssen04145  Phagosome
ssen04148  Efferocytosis
ssen05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122762125 (rab5b)
   04145 Phagosome
    122762125 (rab5b)
   04137 Mitophagy - animal
    122762125 (rab5b)
   04148 Efferocytosis
    122762125 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    122762125 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssen04131]
    122762125 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssen04147]
    122762125 (rab5b)
   04031 GTP-binding proteins [BR:ssen04031]
    122762125 (rab5b)
Membrane trafficking [BR:ssen04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    122762125 (rab5b)
 Endosome - Lysosome transport
    122762125 (rab5b)
Exosome [BR:ssen04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122762125 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   122762125 (rab5b)
  Exosomal proteins of colorectal cancer cells
   122762125 (rab5b)
  Exosomal proteins of melanoma cells
   122762125 (rab5b)
GTP-binding proteins [BR:ssen04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    122762125 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16 Tfb2_C
Other DBs
NCBI-GeneID: 122762125
NCBI-ProteinID: XP_043873246
LinkDB
Position
Unknown
AA seq 221 aa
MSSRGSGGRTNGSLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAEKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGGSSSGN
NT seq 666 nt   +upstreamnt  +downstreamnt
atgagctccagagggagcggaggccgcaccaacggctcgctgccacagaccaagatctgc
cagttcaagctggtgctgctgggcgacatggccgtgggcaagtccagcctggtgctgcgc
ttcgtcaagggacagtttgacgagttccaggagacgaccataggagctgctttcttggct
cagtccgtgtgtctggacgacacgacagtgaagtttgagatctgggacaccgcgggtcag
gagcgataccacagcctcgctcccatgtattaccggggcgctcaggccgccatcgtcgtc
tttgacatcaccaagccggagacgtttgagagagccaaggcctgggtgaaggagctgcag
aggcaggccagtcccaacattgtcatcgctctggccggaaacaaggccgacttggctgag
aagagactagtcgagtacgaggaagcccagacgtacgccgaagacaccggactgctcttc
atggagacgtccgcaaagacggccatgaacgtcaacgagctcttcctggccatcgcaaaa
aagatgccaaaaacagacacccagaacccgacacacgcagcgcggcatcggggagtcaac
ctgcaggacccggacgctcactccacccgagcctgctgcggtggcggcagcagcagcggc
aactag

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