Solea senegalensis (Senegalese sole): 122762339
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Entry
122762339 CDS
T07721
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04510
Focal adhesion
ssen04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122762339 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122762339 (lamb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
TMF_TATA_bd
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
122762339
NCBI-ProteinID:
XP_043873462
LinkDB
All DBs
Position
Unknown
AA seq
1798 aa
AA seq
DB search
MFQIVLLLLVAQVCTCAQEGGASVGWDTNDVIVPEFSDVCTEGSCYPATGDLLIGRAHQL
SSTSTCGLTRPGPFCIVSHLQEEKKCFVCDSATPYDERTNQTSSHGIENVVTTFAPNRLK
TWWQSENGVENVTMQLNLEAEFHFTHLIMTFKTFRPAAMAIERSADFGKTWQVYRYFAYD
CETSFPDISHGPMQKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRINDPYSPRIQNMLK
ITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAVYDMVVRGNCFCYGHASECAPVHGAGSV
LEGMVHGHCMCNHNTKGLNCEHCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDAA
VFMASGNVSGGVCDNCGHNTAGHNCEQCQPFYYQHPERDVRDPNICQPCNCDPVGSLNGG
SCDPMTDVVSGLIAGQCRCKVNVEGERCERCKHAHYGLSDEPEGCKACTCSPLGTLPGGN
PCDQESGSCFCKRLVTGRDCDQCVSEHWGLSNDMDGCRSCDCDLGGAVNNHCDHVTGQCV
CKDHMFGRRCDQVESGFFFVALDHYTYEAEDATFGPGVTVVTRPHPQDRSTTWTGVGLVN
VPEGAFLEFTVDNIPHSMEYDIIIRYEPQLPDQWEEVLMTVMRPEPIRAHSRCVNTVPDD
DNQMTSLHPGSRYMVLPRPVCFETGLNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCK
NLDVFTTLEGGDSHRNSGWDTFQRYRCQENSQGVIKTPMTDICRNFIFSISAMLHQGAKE
CQCDPQGSLSTVCDPSGGQCHCRPNVVGRNCNRCSPATFQFGPNGCRECECDPQGSHSQF
CDQLSGQCACVSGTYGRQCDDCLPGHWGFPACRPCSCNGHADSCDPFTGSCIDCRDHSSG
YSCDRCLDGYYGDPVLGSGDHCRPCMCPDGPGTHRQFAGSCYQSNESQQAICVCNTGYKG
TRCDECTSGYYGNPGEPGGQCQPCQCNNNIDVSEPESCDARSGECLRCLYHTEGVACHHC
KQGYYGNALLQDCTKCVCNQLGSDPSSRQSSGEFECERSSGQCQCLSNVRGQHCDRCAPD
TWNMGSSSGCQACNCDPNHSYGTSCDEISGQCSCHPGFGGTTCTECRELFWGDPEVKCHA
CDCDPRGISERQCNRVSGQCVCVDGVSGLRCDLCARGFSGNFPDCHRCHQCFAEWDDVIG
QLTNQTHRLVNKVNALKASGVSGPYKKSMEVMEKSVTDLQILLNQNPASQPLTEIQLLLQ
QAGDLMTSLTQMLNHTEQTLIQVKDQDSAAQTKLDSVTSDAQKLEQTVQELLDQVEFIKN
SDIRGATDSITKYFLQSQTAEAQANASTISDGSSVKMSATVRKLAEKKVNESREEFLRRH
SEHAQNLDQLAGQLQTLDLSEISHKTCGSPSLGQDLCVSSPCGGLGCVGSDGQSICGGEG
CDGVVATANSVWRNVQKSEQEIIDAMGEVEKLSKMVSEVKLKADEAKLNAQDVLMKTNRT
KHKVDQSNEELRHLIRQIRDFLTQEAADLESIELVANEVLQMQMPTTPAQLQNLTEEIRE
KVGELGHVETILQQSTDNIERAENLLNQARRASEDAADVKDSAEKVKRALEEAQRAQSSA
TSAIQQASANVQHTNNLLSTVNSETAEAELKLTNATRRLQKLEHDVTQLRDKVVNATQSS
EQTNKDAASIKRVAEEVKKDLDSDLKEKYATVGQLIGQKAGGVADAKKKAESLQQEAKEL
LLQASDKLQLLKDLEKSYKDNQQSLEVKAEQLVELEAAVKQLLQDISHKVTVYSTCLF
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagatcgttctactgctgcttgttgcacaggtgtgtacctgtgctcaggagggc
ggagcctctgtgggctgggacacgaatgatgtcattgtcccagagttcagtgacgtgtgc
accgagggcagctgttacccggcaacaggagaccttctgattggccgagctcaccaacta
tcgtccacctccacctgtggtttgacccggcctggaccgttctgcatcgtcagccacctg
caggaggagaagaaatgttttgtgtgcgactcagcgacgccgtacgacgagcggaccaat
cagacgagcagccacggcatcgagaacgtcgtcaccacgtttgctccaaacagattaaag
acgtggtggcagtctgagaatggtgtggagaatgtcaccatgcagctgaacctggaggcg
gagtttcacttcactcacctcatcatgacctttaagacgttccgtccagctgccatggcg
attgagcggtcagctgacttcggtaagacgtggcaggtttatcgttactttgcgtacgac
tgtgagacgtcgttccccgacatttcccatggtccaatgcagaaggtcgatgatgtcatc
tgtgactcacgttactctgacatcgagccatccactgaaggcgaggttattttcagagta
ctggacccggcgttcaggatcaacgacccgtacagtcccaggattcagaacatgttaaag
ataaccaatctgcgggttaagttcactaaacttcacacgcttggagacaacctgctagac
tctcgtatggagatcaaagagaagtattactatgccgtctacgacatggtggtgcgagga
aactgcttctgctatggccacgcctctgagtgcgcccctgttcacggagcaggttcagtc
ctggaaggcatggttcatggtcactgcatgtgtaaccacaacaccaaaggtctgaactgt
gaacactgtcaggacttttaccatgatcttccctggagaccggcagagggacgcaacacc
aatgcctgcaagaagtgtaactgtaaccagcactcggactcgtgtcactttgacgcggcc
gtgttcatggcttcaggaaacgtcagcggtggcgtctgtgacaactgtggacacaacaca
gcgggacacaactgtgagcagtgtcaacccttttactaccaacacccagagagagatgtg
agagacccaaacatctgccagccatgtaactgtgaccctgttggatctctgaacggaggg
tcatgtgacccgatgactgatgttgtcagcgggctgatcgcgggtcagtgtcgctgtaaa
gtcaacgtagagggagaacgctgcgagcgctgcaaacacgcccactatggtctgagtgac
gagccggaaggttgtaaagcatgtacctgtagtccactgggaacacttcctggaggaaat
ccatgtgaccaggaatcaggaagttgtttctgtaaacgtctggtgacgggacgggactgt
gaccagtgtgtgtctgaacattggggcctcagtaatgacatggacggctgcagatcgtgt
gattgtgaccttggaggagccgtcaacaaccattgtgatcatgtgacgggtcagtgtgtg
tgcaaagatcacatgtttggccgacgttgtgatcaggtggagtctggattcttttttgtt
gccttggatcattatacatatgaagcagaagatgccacatttggacccggtgtgaccgtt
gtgacaaggccacacccacaggatcgcagtaccacctggacaggtgttggcctggtcaac
gtaccagagggcgctttcctggagttcactgtggacaacatccctcactccatggagtat
gacatcatcatccgctatgagcctcagcttcctgaccaatgggaggaggttctgatgaca
gtgatgaggcctgagccaatcagagcacacagccgctgtgttaacacagttcccgatgat
gacaaccagatgacttcacttcatcctggctcacggtacatggttcttcccagaccagtg
tgttttgaaactggtctgaactacacggtccgcctcagtctgcctctctactctgccctc
agtgacgtccagtctccatacacactcatcgactcgattgtgctgatgccgcactgtaag
aacctcgatgtcttcaccaccttagaaggtggagactctcacagaaacagcggctgggac
actttccaacgttatcgttgtcaagagaacagtcagggtgtcatcaagacgccgatgacg
gacatctgcagaaacttcatcttcagcatctctgccatgttacaccaaggagctaaagag
tgtcagtgtgacccacaaggttccctcagcacagtgtgtgaccccagtgggggtcagtgt
cactgtcgtcctaatgtggtcggtagaaactgtaaccgatgttctccggccacgttccag
ttcggacccaatggctgcagagaatgtgagtgtgaccctcagggttcacacagtcagttt
tgtgatcagctcagcggacagtgtgcttgtgtgtcgggcacatatggtcggcagtgtgat
gactgtctgccgggtcactggggttttcccgcctgccgaccctgctcgtgtaacggtcac
gctgattcctgtgacccgttcactggctcctgcatcgactgtagggaccacagctctgga
tacagctgtgacagatgtctggatggttactatggtgacccagtcttggggtctggagac
cactgtcgtccatgcatgtgtcctgatggccctggcacccacagacagtttgcaggaagt
tgttaccaaagcaacgagtcccagcaggcgatctgtgtctgcaacactggatacaaaggt
actcgttgtgatgagtgcacctctggttactatggaaaccctggcgagccaggcggccag
tgtcaaccctgtcagtgcaacaacaacattgacgtgtcggagccagaatcctgcgacgct
cgtagtggcgagtgtctgcgctgcctgtaccacactgagggcgtcgcctgtcaccactgc
aaacagggttactatggaaatgctctgctgcaggactgcacaaagtgtgtgtgtaaccag
ctcggcagcgatccctccagccgccaatcatctggagaatttgagtgtgagcgcagcagt
ggtcagtgtcagtgtctgtcaaatgtgaggggtcaacactgtgaccgctgcgctccagac
acctggaacatgggcagcagcagtggctgccaggcgtgcaactgtgaccccaatcattca
tacgggacatcctgtgatgagatcagtggtcagtgttcctgtcatccaggctttggagga
acaacgtgcactgagtgtagagagctgttctggggagacccagaggtcaaatgtcatgcg
tgtgattgtgaccctcgtggaatctctgaacgtcagtgtaacagagtcagtggtcagtgt
gtgtgtgtggacggagtgtcaggactgcgctgtgacctctgcgcccgcggattctcagga
aacttccccgactgccatcgttgccatcagtgttttgcagagtgggacgacgtcattggt
cagctgaccaatcaaacacatcgcctggtcaataaggtcaatgccttgaaagccagtggt
gtgagtggaccctataagaagtccatggaagtcatggagaagagtgtcactgacctccag
atcctcctgaaccagaacccagcttcacagccactcactgagatccagctcctgctgcaa
caggccggtgacctgatgacgtctctgacccagatgttaaaccacacagaacagactctg
atccaggtgaaagaccaggactcagctgctcaaactaaactagactctgtgacgtcagat
gctcagaaactggagcagacggttcaggagctcctggatcaggtggagttcatcaaaaac
tctgacatcagaggggcgacggacagcatcactaaatacttcctgcagtctcagacagct
gaagctcaagccaacgcctccactatcagtgatggcagcagtgtgaaaatgtctgccact
gtaaggaaactggcagagaagaaagtgaatgaaagcagagaagagttcctcaggagacac
agtgagcatgcccagaacctggaccagctggcaggacagctgcagactctggacctgtca
gagatcagccacaagacatgtggaagtccatcactgggtcaggatctgtgtgtgtcctct
ccctgtggaggtttgggctgtgtgggctctgacggtcagagcatttgtggaggtgaagga
tgcgatggcgtcgtggcgacggccaacagtgtatggaggaatgttcaaaagtcagaacag
gaaatcatcgatgccatgggggaggttgaaaaactgtcaaagatggtgtcagaagtgaag
cttaaagcagatgaagctaaactgaatgctcaggatgttctgatgaagacaaacaggacc
aagcataaagtggaccagagtaatgaggagctgagacatctcatcagacagatcagagac
tttctaacacaggaagccgccgacctagagagcatcgagctcgtagccaacgaggttctg
cagatgcagatgccgacgactccggctcagctacagaacttgacggaagagattcgggag
aaagtgggagaactcggtcacgtggagactattttgcaacagagcactgacaacatagaa
agagctgagaacctgctgaaccaggccaggcgagcgagtgaggacgcagctgatgtgaaa
gactctgcagagaaggtgaagcgagcactggaagaagctcagagagctcagagttctgcc
accagtgccatccagcaggcgtccgccaacgtgcagcacaccaacaacctgctgtccacg
gtgaactctgagacggcagaagctgagctgaagctaaccaacgccacccggaggctgcag
aaactcgagcacgatgtaacccagctaagagacaaagttgtgaatgcgactcagagcagt
gaacaaaccaataaggatgcagcaagcattaaacgtgtagctgaagaggtgaagaaagat
ctggactcagacctgaaggaaaagtatgccacagtaggacagctgattggacagaaggcg
ggaggcgtggctgatgccaagaaaaaggcagaatcccttcaacaggaagccaaagagctg
ttattgcaggccagcgacaaactgcagctgctgaaagatctggagaagtcgtacaaagac
aaccaacaatctctggaggtgaaggcggagcagctggtggaactggaggctgcagtcaaa
cagctgctgcaggacattagccacaaagtcactgtgtacagcacctgtcttttctag
DBGET
integrated database retrieval system