Solea senegalensis (Senegalese sole): 122762481
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Entry
122762481 CDS
T07721
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122762481 (chd1l)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122762481 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
LIG3_BRCT
IBB
DEAD
ResIII
BRCT_2
DUF4604
RNA_pol_3_Rpc31
AAA_22
Motif
Other DBs
NCBI-GeneID:
122762481
NCBI-ProteinID:
XP_043873620
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MQDFHVLLTTYELCLKDTSFLKRWKWKVLVVDEAHRLKNQKSLLHKTLTQLCSEFRVLLT
GTPIQNNLQELYSLLTFIQPSVFTVDELNTFVQYYADVRKNPALAAELQKVLEPFLLRRV
KSEVALDLPRKVELVVYHGMSALQKKYYKAVLMKNSEAFGNEQRNKTRLLNILVNLRKCV
NHPYLFDGVEPEPFQMGEHLVEASGKLCLLDSILTLLHKEGHRVLLFSQMTRMLDIIQDY
LEYKNYSYERLDGSVRGEERNLAVKNFSSRDVFIFLLSTKAGGVGLNLTAADTVIFVDTD
FNPQNDLQAAARCHRIGQSRPVKVIRLLARNTVEEMMYSRAASKLHLTNTVIEEGRFSLL
NEPTTSTAQGMQLSEILKFGVDKLLSSEESSVQDVKLEKILGLSRNGQWVSDEDVSSHSE
EEDEDEEEQEEEEQEEEEEEEEESDRYHMYYFEGKDYRQCTSSKDLNAFDRLVEEHQAAI
QTQAGEGRALRHKAGGTPSFAAGIPTKKRRTFTEAELELRRQKREEAAAKRAKTQEDTKK
RQQEQKHKNKLAWWDSCGYRSLCLQSVDSEEEEDEEDLDDVSSVCSTDSDDSRAIHYVLG
DVTHPHAQKEDAVIVHCVDDSGRWGRGGLFTALETRSDEPRKQYELAGKMKDLELGNVLV
FPIDDKQSRMDGQDRVSVPQLALIVAQHRDKHNSLSGIFLSALDQGLKKISVAAKRLKAS
VHLPRIGHSTKGFNWYGTERLIRKHLASRGISTFIYYHSTAAPAQALAPAAADPPPPGSD
TESPGPSAAVPNLPSFMTGVHVFFYNLPASERKSLARYLITYDGDEEDVMSPGVTHIVAE
VENNIHSQELQDLVGQYTRAVAVQKSWLESCFSKQRKVDTKPFKHLLD
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattttcacgttcttctcaccacgtacgagctctgcctcaaagacacctcattc
ctgaaacggtggaagtggaaggtgctggtcgtggacgaggctcatcgtctgaagaatcaa
aagtcactgttacataaaactctgacacagttgtgttcagagtttagggtgctgctgaca
ggaacaccgatccagaacaatcttcaggaactctactctctgctgactttcatccagccc
agcgtcttcactgtggacgagctgaacacgtttgtgcagtattacgcagacgtacggaag
aatcctgctcttgctgctgaacttcagaaggtcttggagccgtttcttctgcgcagagtg
aaatctgaggtggctctagatttgcccaggaaggtggagctggtggtttatcacggcatg
tcggctctgcagaagaaatactacaaagctgttctgatgaagaactctgaggcgtttgga
aacgagcagcggaacaagactcgactcttgaacatcctggtgaacctgaggaaatgtgtc
aaccacccgtatctgtttgacggtgtggaaccagagccgtttcagatgggagaacatctg
gttgaagccagtgggaagctctgtctcttggacagcattctgactctgctgcacaaagag
ggtcatcgtgtcctgctgttctctcagatgaccaggatgttggatattatccaggattat
ttggagtacaaaaattacagctacgagcgtctggacggttcagtccgaggagaagaacgg
aatctggccgtgaagaacttcagcagcagagacgtcttcatctttctgctcagcactaaa
gcaggtggggtggggctgaacctcacggccgctgacaccgtcattttcgtggacactgac
ttcaaccctcagaacgacctgcaggccgcagctcgctgccatcgcattggtcagagcaga
ccggtgaaagtgatccgtctgctggccagaaacactgtggaagagatgatgtactctcgc
gccgcatccaaactccacctcaccaacacggtcatcgaagagggacgcttctctttactg
aatgaacctaccaccagtacagcacagggaatgcagctcagcgagatcttgaagttcggg
gtagataagctcctgtcatcagaagagagctccgtgcaggatgtgaaactggagaagatc
ctcggcctgtcacgcaacggacagtgggtgagtgacgaggatgtcagctcacacagtgaa
gaagaggatgaggacgaagaagagcaggaggaggaggagcaggaggaggaggaggaggaa
gaggaggaatcagacagatatcacatgtactactttgagggcaaagactacaggcagtgc
accagctctaaagacctcaatgccttcgatcgcctggtggaggagcatcaggctgcgatt
cagacgcaggcgggagagggacgagcactgcgacacaaagctggaggaacgccgtcgttc
gctgccgggattccaacaaagaagaggagaactttcaccgaggccgagctggagctgagg
cgtcagaagagagaagaggctgcagccaagagagccaagactcaggaggacacaaagaag
agacagcaagagcaaaaacacaagaacaaacttgcctggtgggactcgtgtggctacaga
tcgctgtgtcttcagtctgtggacagcgaggaggaggaagacgaggaggacttggacgat
gtcagcagtgtttgttccacagactccgacgacagcagagcgatccactacgtcctcggg
gacgtcactcatcctcatgcgcagaaggaagacgccgtcattgtccactgtgttgatgac
tcagggcgttggggcagaggaggtttgtttactgctctagagacgagatctgacgaacca
cgaaagcagtatgaattggcaggaaagatgaaagatctggagcttggaaacgtgctggtc
ttccccatcgatgacaaacagtccagaatggacggccaagatcgagtttctgtacctcag
ctggctctgatcgtggctcagcacagagacaaacacaacagtctgtctggaatcttcctc
tctgctctggaccagggtctgaagaagatttctgtggcggccaaacgactcaaagcaagc
gttcatcttcctcgcatcggtcactccaccaaagggttcaactggtatggaactgagcga
ctgatcaggaagcacttggcctccagaggaatctcaacattcatatactatcacagcaca
gcagctccagctcaggctctggcccctgctgcagctgatccaccgccgcctggctctgac
acagagagtccaggtccgtcagctgctgttccgaatctgcccagtttcatgacaggagtc
cacgtgttcttctacaaccttcctgcgtcagagaggaagagcctcgcccgctacctcatc
acttatgatggagacgaggaggatgtgatgagtccaggtgtgactcacatcgttgccgag
gtggagaacaacatccactcacaggagctccaggacctggttggtcagtacactcgggca
gttgcggtacagaagtcctggttggaatcctgcttctccaaacaacgaaaagtcgacact
aaacccttcaagcatttgttggattaa
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