Solea senegalensis (Senegalese sole): 122762496
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Entry
122762496 CDS
T07721
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122762496 (zswim8)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
122762496 (zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Ribosomal_L24e
Motif
Other DBs
NCBI-GeneID:
122762496
NCBI-ProteinID:
XP_043873627
LinkDB
All DBs
Position
Unknown
AA seq
1971 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRIRAVKDPLQIGFHLSATVVTSQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTYEQIISWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTMSPCRRLELAVQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCYFNWEVAY
PLEGITYCSADKKSANFCWSRAVQHQRGVKAAAGGGGDAESGGVGRAEGGDFKGRGSSHL
SQQEVAVRPKETILTKRKGLSVSGGGGMLVRLGGSVSLSLDDGGVKCMYKGPGSSSGGKL
KLTPGGIKGASVGGAAGSGGLGGGKHASVKRRTSSEDSSLEPDMAELSLDDGCNLALGAE
ASNTFEFLPPPPEMVPSPSPLLRDSRKYNSSSTGGKIFDTKCIGLTVAVLPAPEPTHPCF
PSKETVAGVTDTPSAAEKQAEAEVESVQNKDEDVDSADSNHPSTSSTTARTGTAPASAKA
PHSHREVVAAGAPGAPGAPGAPGAAGAAGAAGAAGAAAAGRPAGGEAVGEDDYQAYYLSA
ASEEGAERQLTDNHQEEEPDIFAGIKPLEQEGRMEVLFACAEALHAHGYSNEACRLAVEL
ATDLLANPPDLKVEQPQTKGKKSKVSTSRQTQVATNTLSKAAFLLTVLSERLELHNLAFS
TGMFSLELQRPPASTKALEVKLAYQESEVVSLLKKIPLGLVEMSAIRERAEQLRDGNFCD
YRPVLPLMLASFIFDVLCTPVCAVVSPTGSRPPSRNRNNEMPGDEELGFEAAVAALGMKT
TVSEAEHPLLCEGTRRVKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQTLSSFY
SSKPAAGSQRSPSKHTVSGHSGVGGATGGVSKHAPSSSSSVPTVTASSSAVTLAAEEVAH
QAELQPVQSSTAGESTAETREHVSDGPPSSSDQQNETAPFKLEVTVPSRLALGARCGYSQ
RCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAAASWGRGQDSDSISSS
SSDSLGSSSSSGSRRAGGGARAKSNDTSRYKGRRPECHAPHVPNQPSEAAAHFYFELAKT
VLIKAGGNSSTSIFTQPSASGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSH
VSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRARDLNMVRAAAELALSCLP
HAHALNPNEIQRALVQCKEQDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQS
VGGGSAQQRETSGRCGANGGSGRRSQESTCVVLDGGVNMESQGTATVTASVTAAAVVPVI
SVGSTIYQSHAIAGQAMAHPHTQGLHPYTTIQAHLPTVCTPQYLGHPLQHVPRPTVFPVT
GAAYPQGMHPAFIGAQFPFSVATGPQPPMAATAVTFPGVPVPSMTQIAVHPYHTESGLPL
STTVAVGSVHAGQTIQTIQGASMPSLSSQPGSMVSTHTFLAEDEQHSQPISQQGLHHLHS
AYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNYVYQFCVGAAKGV
LSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLIHLTPADYDD
FVNIIRSARGAFCLTPVGVMQFNDVLQNLKRGKQTKELWQRISLEMATFSP
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgttcgccgagtgggaggacggggagaggttctcattcgaagactcggac
cggttcgaggaagactctctgtgctccttcatctcagaggccgagagcctctgtcagaac
tggagaggatggaggaagcagtctgctggacccaactcacccactgtcaaaattaaagat
ggtcaggtcattcccttggtggagttgtcagctaaacaggtggcgttccacataccattc
gaggtggtggagaaagtctatcccccagtccctgaacaactccagctacgcatcgcctac
tggagtttccctgaaaatgaggaagacatcaggttatattcctgcctggccaatgggagt
ccagatgaatttcaacgtggagagcaattgtacaggatcagagctgtcaaagacccgctt
cagatcggtttccacctcagtgccacagtggtgaccagtcaggccggtcagtctaaagga
gcctacaacgtggctgttatgtttgaccgctgccgcatcacttcctgtagttgcacatgt
ggtgcaggagccaaatggtgtgcccacgttgtagcgctgtgtctcttcaggatccacaat
gcatcagcagtgtgtcttagggctccagtctctgagtctttatccagactgcagagggac
cagctccagaagtttgcccagtacctcatcagtgaactgcctcagcagatcctgcccacc
gctcagcggttgctggatgagctgttgtcttctcagtccactgccatcaacactgtgtgt
ggagctccagaccccaccgcaggcccttcagcttctgaccagagcacttggtatttggat
gagtcgactctcagtgacaacatcaaaaagactctacacaagttctgtgggccgtcacct
gttgtcttcagtgatgtaaactccatgtacctgtcgtccacggagccgcccgcggctgcc
gagtgggcgtgtctgctgcgaccactgaggggccgtgagccagaaggcatctggaacctt
ttgtccatcgtcagggagatgtttaagagacgagacagcaacgctgcaccgcttctggag
atcctcacagagcagtgtctcacctatgaacagatcatcagctggtggtacagtgtccgg
acgtcagcctcccacagcagtgccagcggccacactggacgcagcaacggccagtcagag
gtggcggctcatgcctgtgccagcatgtgtgatgagatggtggtgctctggaggctggcg
gtgctcgacccgaccatgagcccctgcaggcgtctggagctggctgtccagttgaagcag
tggcatctcaaagtcattgaaatcgtgaagcgggggcaacatcggaaatccttggataaa
ctgttccagggcttcaagcctgcggtcgagtcctgctatttcaactgggaggttgcctac
ccactggaaggcatcacctactgtagtgccgataagaagagcgccaacttctgctggtcc
agagcagtgcaacatcaacgaggagtcaaagctgccgcaggggggggtggagacgctgag
tcagggggagtagggagagctgaaggtggagattttaaaggaagaggcagcagtcacttg
tcccaacaggaggtggcagtgcgacccaaggagaccattctgaccaagaggaaggggctg
tctgtgagcggcggcggggggatgctggtccgtcttgggggcagcgtctctctgtccctg
gacgatggaggtgtgaagtgcatgtacaaagggccaggctcctcctctggaggaaagctg
aaactgactcctggaggtataaagggtgcatctgttggaggtgctgcaggaagtggaggg
ttaggaggcggtaagcacgccagcgtcaagcggagaaccagcagtgaggatagctccctg
gagccagacatggctgagctcagtctggatgatggctgcaatctggctctgggcgctgag
gccagcaacacttttgagttcctccctccgccaccagagatggtgccgtctccgagcccc
ctgcttcgagactctcgcaagtacaacagcagcagcacgggaggcaagatctttgatacc
aagtgcatcggccttactgtggctgtacttcctgctccagagcccactcacccctgcttc
ccctccaaagagacggtggcaggtgttacggacacgcccagtgctgcagagaagcaggcg
gaggcggaggtggagtctgtccagaacaaagacgaagatgtggactcagctgacagtaac
catccatctacctccagcacaacagcaagaacaggcaccgctcccgcatctgcaaaggca
ccgcacagccacagagaggtggtggctgcaggagctccaggagctccaggagctccagga
gctccaggagctgcaggagctgcaggagctgcaggagctgcaggagcagcggctgcaggt
agaccagctggaggagaagctgtgggtgaggacgactatcaagcgtactacctgagcgct
gcctcagaggagggagcagagcgtcagctgactgacaaccatcaggaggaggagccagac
atctttgcaggaatcaaacctctggagcaggaaggacgcatggaggttctgtttgcgtgt
gcagaggctcttcacgcccatggttacagtaacgaggcgtgccggctggccgtggagctg
gccactgacctgttggctaaccctccagacctgaaggtggagcagccgcagaccaagggg
aagaagagcaaggtgtcgaccagccgtcagacacaggtggcgactaacacgctgtccaaa
gctgctttcctcctcactgtcctcagtgagagactggagctgcacaacctggccttcagc
accggcatgttctctctggaactccagagaccaccggcatccaccaaagctctggaggtg
aagctggcctatcaggagtcagaggtggtgtctctgttgaagaagatccctctgggtctg
gtggagatgtcggccatcagagagagagctgagcagctgagagacggaaacttctgtgat
tacagaccggtgctgccgctcatgttggccagcttcatctttgatgtcctgtgtactcca
gtttgtgcagtggtgtccccaacagggtcccgtccaccgagccgtaaccgcaacaacgag
atgcccggtgatgaagagctgggcttcgaggcagctgttgctgcattaggcatgaagacg
acggtcagcgaggcagaacatcctcttctctgtgagggaaccaggcgtgtgaagggtgac
ctcgctctggccctcatgatcacgtataaggacgaccagagcaagctgaagaagatactt
gataagttgttggacagggagagtcagacccacaagcctcagactcttagctccttctac
tccagtaagccagcagccggcagccagcgcagcccatccaagcacactgtctctggccac
agcggggtgggcggagctacagggggagtctccaaacacgcaccttcatcttcctcttca
gtgcccactgtgacagcctcttcctctgctgtgacactggctgcagaagaggtcgctcat
caggccgaactacagccagtgcaaagcagcacagcaggggagagcactgctgagaccagg
gagcatgtatcagacgggcctccctcatccagtgaccagcagaatgagacggctccattt
aagctggaggtcactgttcccagtcgactagcattgggcgcacgctgtggttacagccaa
cgctgctggggctcacctgtgcgacagaagaagaaacacactggcatggcaagtatcgac
agcagtgctccagaaaccacctcagacagttcccccaccctcagccgccgcccactccgg
ggcggctgggccgcagcatcgtgggggcggggccaggacagtgacagcatcagcagttca
tcatcagattcgttgggctcctcctcctccagcggctctcgtagggcagggggcggggcc
agagcgaagagcaatgacaccagcaggtacaaagggcggcgcccagagtgccacgccccc
cacgtacccaatcagccgtcagaggccgcagcacatttttactttgagctggccaagacg
gtgctaatcaaagctggaggaaactcgtccacctccattttcactcagccctcagccagt
gggggccaccaggggccccacaggaacctgcacctgtgcgcctttgaaatcggcctgtac
gcccttggactacacaactttgtctctcccaactggctctccaggacctactcctctcat
gtgtcctggatcactggccaggccatggagattggcagtgctgctctgaacatcttggtt
gagtgctgggacggtcacctgactcctccagaggtggcgtccttagcagaccgagcgtcg
cgggccagagaccttaacatggtgcgggcggcagcagagctggccctgagctgtctgccc
cacgctcatgctctgaatcctaatgagatccagagagcactggtgcagtgtaaagagcag
gacaacgtgatgctggagaaggcctgcatggcagtagaggaagcagctaaaggagggggc
gtgtatcctgaggttctgtttgaagtggctcatcagtggtactggctgtacgagcagtct
gtgggcgggggctcggcccagcagagggagacgtctggacgctgcggggccaacgggggt
tctggcaggagatcgcaggaatccacctgcgtggtgctggacggcggggtcaacatggag
tctcaggggacggcgacggtcacggcctcggtcactgcagcggctgtggtgcccgtcatc
tccgtgggctccaccatctaccagtcccacgccatcgcaggccaggccatggctcaccct
cacacccagggcctccacccctacaccaccatacaggcccacctccccactgtgtgcacc
ccacagtacctgggacaccctctgcagcatgtcccccgccccactgtctttcctgtgact
ggagctgcttatccacagggaatgcacccagcgtttattggggctcagttcccgttctcc
gtggccactggcccacagccacccatggcagccacagctgtgaccttccctggtgtcccc
gtcccatccatgactcaaatagccgtccatccctaccacactgagagcggcctgccgctc
agcaccactgtagcagtcggcagcgtccatgcgggccagaccatccagaccattcaggga
gcgtccatgccgtccctctcctcacagcccggctccatggtcagcactcacactttcctg
gcagaggacgagcagcacagtcagccgatcagccagcaggggctgcaccacctgcactcg
gcctacagagttggcatgctggcattagagatgctgggtagaagagctcacaacgaccat
cctaacaacttctccaggagtcctccttacactgaagatgtgaagtggctgctgggactg
gccgctcgcctcggagtcaactatgtgtaccagttctgtgtaggagcagcaaaaggtgtc
ctcagtccgtttgtcctgcaggagatcatcatggaagctctgcagaggctaaaccccgcc
cacatccacgcccacctccggacacctgctttccatcagcttgtccagcgctgccaacag
gcttacctgcagtacatccaccaccggctcatccacctgacacctgcagactatgacgac
tttgtcaacatcatccgcagcgcgagaggagcgttctgtctgacgcctgtgggcgtgatg
cagtttaacgacgtgctgcagaacctgaagagaggcaaacagaccaaggagctgtggcag
cgcatttccctggaaatggcaaccttctcaccctga
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integrated database retrieval system
