Solea senegalensis (Senegalese sole): 122762540
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Entry
122762540 CDS
T07721
Symbol
cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122762540 (cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122762540 (cnot10)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122762540 (cnot10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_14
TPR_19
TPR_8
TPR_7
ANAPC3
ARM_TT21
TPR_10
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
122762540
NCBI-ProteinID:
XP_043873680
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MAETAEQNEAKHDGSSSPGVTDQEKQMAASAYEAFSTGKYDESLKHLQALQELNKEDYKI
ALNKAVVDFYKSGQSTTGTLKQTLIIMKNQVHTSAEEVDGLDDVENSLLYYNQAIIHYHM
RQYSEAISIGEKLYQFLEPFEKFAQAVCFLLVDLYLLTFQPEKALHLLAVLDKLSVQGSN
KNGKGDNNSSNKEGASQKAEFTAMNEAAKSKMHQYKVRAYIQMKSSKACKREIKSVMNTA
GNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGPIKTGECVRCMFWNNLGCIHFAM
GKHNLGIFYFKKALQENDNTCAQLGDGGNGQTKKFTGIPMCALLANKRYELLYNCGIQLL
HIGRPLAAFECLMEAVQVYHSNPRLWLRLAECCIAANKGGSEQESKGLPCKKGIVQSIVG
QGYHRKIVLASQSAQNTIYSEGQSAAIPVASMEFAAICLRNALLLLPEHQQVDTKTDVSK
SFSQSGSTESGSENSDACSGKGQEADKFLSAAPSSPLRKQEIENLRCSILACSAYVALAL
GDNLMALNHAEKLLHQTKVSGSLKFLGHLYAAEALISMDRISDAIAHLNPENVSDVSVGV
LSSEQDQGSDKGDEPVESSGKQTPLCYPSSVTSARAMMLFNLGSAYCLRSEYDKARKCLR
QAASMVNSKEIPPEAILLGVYLELQNGNTELALQIIKRNQLLPTAVQRVSPDSRKKPVQP
FQLSSSFTQVQRK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactgcagaacaaaatgaggcgaagcatgacggctcatcatcccctggagtg
acagaccaagagaagcaaatggctgccagtgcatatgaagcgttttcgactgggaaatat
gatgagtctctcaagcaccttcaagcactgcaggagctcaacaaagaagactacaagatc
gcattgaacaaggctgtggtagatttttacaaaagtggtcagtctaccacagggactctg
aagcagactctaatcataatgaagaaccaggttcacacatcagcagaagaagtggatggg
ctggatgacgttgaaaacagtttgctgtactataatcaggccatcatccactatcatatg
agacagtactctgaagccatctccataggagagaagctgtaccagttcctggaaccgttt
gaaaagtttgctcaggccgtctgtttcctgctggtggatttgtacctgctcaccttccag
ccagagaaggccctccacctgctggctgtgctggataaactctctgtacaagggagcaac
aagaacggcaaaggagataacaacagttcaaacaaagaaggtgctagtcagaaagcagag
ttcacagccatgaatgaggcagccaaatcaaagatgcaccagtacaaagtgagagcttac
attcagatgaagtcatcgaaggcctgtaaaagagagatcaaatcggtgatgaacacagcg
gggaattccgcgccctcacttttcctcaagagtaattttgagtacctgagaggaaactac
cggaaagcagtgaagctgttgaatagctccaacattgcagagcatcctggtcccataaag
acaggagaatgtgtccgatgtatgttctggaacaacctgggctgcatccactttgcaatg
gggaaacacaacctaggcattttttacttcaagaaggcactgcaagagaacgataacacc
tgcgcacagctgggagacggcggcaacggccaaactaagaagttcacaggcatccccatg
tgtgctctactagccaacaagcgctacgagctgctctataactgtgggattcagttgctc
cacattggcaggccactggcagcctttgagtgtctgatggaggcggtgcaggtttaccac
tccaaccctcggctgtggttacggctcgctgagtgctgcatcgcagccaacaaagggggc
tcagagcaggagagcaaaggtttaccttgtaaaaaaggtatagttcagtctattgtcgga
cagggctaccatcgcaagattgttctggcatcacagtcagcccaaaacaccatctacagt
gagggtcagtccgcagcaatcccagtagccagtatggagtttgcagccatctgcttgagg
aacgctctgctgctgctgcctgaacaccagcaggtggacaccaagacagacgtttccaag
agcttcagtcagtcaggaagcacagagagcggcagcgagaacagtgatgcgtgcagtggg
aaaggtcaggaggctgataaattcttgtctgcagctccatcatctcctctcagaaaacag
gagattgaaaatctcaggtgctccatcctggcctgtagtgcttatgtggctctggcactc
ggagacaacctgatggctctgaaccatgctgagaaactgctccaccagaccaaggtgtct
ggatccctcaagttcctgggtcacctctatgctgctgaagctctcatctccatggacagg
atctctgacgccatcgctcatctcaacccagagaatgtcagtgacgtgtcagtgggagtg
ttgagcagtgaacaagaccaagggtctgacaaaggagacgagcctgtggagtcctcaggg
aagcagactcctctgtgttaccccagcagtgtgacatcagcacgggccatgatgctcttc
aaccttggcagtgcctactgcttgaggagcgagtatgacaaggcccgcaagtgcctgcgt
caggctgcatcgatggtgaactccaaggagattccacctgaagccatcttgctgggagtt
tacttagagctacagaacggaaacaccgagctggctctgcaaatcattaaacgcaaccag
ctgctgcccacagccgtccagagggtgtcgccagactctcgcaagaaacctgtccagcct
ttccaactgtcctcatccttcacacaagttcagcgcaaatga
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