Solea senegalensis (Senegalese sole): 122762912
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Entry
122762912 CDS
T07721
Name
(RefSeq) TBC1 domain family member 8
KO
K19951
TBC1 domain family member 8/9
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122762912
Membrane trafficking [BR:
ssen04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122762912
Endosome - Golgi transport
Rab GTPases and associated proteins
122762912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
122762912
NCBI-ProteinID:
XP_043874020
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All DBs
Position
LG2:complement(2072844..2092144)
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AA seq
1136 aa
AA seq
DB search
MWLKPEEVVLKNALKLWVTERSNDFFLLQRRRGHGESTGRITGLLVGALDTVLDSNARVT
PFRILLQVPGSQISWVIASGAAVEEVNKHWDWLVHNLLHSLSVFENKEDVASFVKGKVKG
LIAEEVRGRQAAQEEDPEKFREALLKFELHFGLPSSEKLVTFYSCCCWKGRVPRQGFLYL
SINHMAFYSFLLGKEVKFVIPWAEVTRLERVSTGLMTEAIRVNTRQRQREFSMFLNLDET
FGVIGQLADIALRRLLDSEGLELDRVLQQPARITKRILEEQALREYVLALFRLPRSERLH
EVASCSVWTPHARCHTSGTLYTTDSYLCFSSREEGSCILLLPLTEVLSIEKAESTSPLPN
PVIVSVRMKKAFQLIELQDRDELVDSLNSRLRALQWKVSMFRSRKDSKRSLGSPTPYYTF
YYDTGFSDEEEIEEQVLRNTINSEALMTAFHQNKPGANGNKSMEQVKEQLWDNHFSEFGR
GVHMFRTEKIQRLVAMGIPESLRGELWMTLSDASSELESHQGYYTNLVQKSMGQSNLATD
EIERDLHRSLPDHPAFQNPTGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYAKEEE
AFWLLVAVCERMLPDYFNRRVIGAQVDQSVFEELIRERLPELAEHVPDLSSLSSVSLSWF
LTLFLSVLPFHSAVRVVDCFFFHGIKAVLQLGLAVLDANAALLSASTDDGQALMILTSFL
EQVDSEASPLPPSSPPAAEQSSRGDDDVPAAGHINITDLINESYEKFGDLTVRQIERLRC
RHRIRVLQAHEDTTKENALRLVTPDVSISSENLSDIYDLFKTEHFISLYWGDSSSAAAAE
AAAWSYMDSGRSYLERQYRLDRPQFKSLYGLLVPWPGESNQHTDTVANRTFTLLDQDRDN
LVTFREFAGWLDTLYCEELNEKIRLLYRLHIPPALTESEDDPSLMKNPLLSTNRPLYVNK
PSDVEGEVKREDFQEQLKQMLKDLAKEKQKDVDKPLPLMNQWEFIQFCKTLYSLFHGDSE
ENELFQAIATVTSLVLQIGEASHRGDASESPVKKTQVTAGDDVTAGGGGGGGDRNTTAEK
EWTVSLAQIVASLLTEQSLVNFLEKSVDLSEKIAEAKEKQYHQRAGLLTLQQKHRS
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaaaccggaggaagttgtgctgaaaaacgcactgaagctctgggtgacggag
aggagcaacgacttctttctcctgcagaggaggagaggccacggggagtcgacgggcagg
atcacaggtctccttgtgggggcgctggacacggtgctggactccaatgccagggtcact
cctttccgcatccttctccaggttcctggctcccagatcagctgggtcattgccagtgga
gctgccgtagaagaggtgaacaagcactgggattggctggtccacaacctgcttcactct
ctgtctgtgtttgagaacaaggaggatgttgccagctttgtcaaaggaaaagtcaagggc
ctcattgcagaggaggtccggggccgccaggccgcccaggaggaggacccggagaagttc
agggaggcactgcttaagttcgagttgcactttggcctcccgtcatcagagaaattggtg
acgttctactcctgctgctgctggaagggccgggtgcctcggcagggcttcctctacctc
agtatcaaccacatggccttctactctttcctgctggggaaggaagtcaagtttgtcatt
ccgtgggcagaggtgacgcggctggagcgggtctccaccgggctgatgacggaggcgatc
cgggtcaacactagacagcggcagagagagttctctatgttcctgaaccttgatgagaca
tttggggtcataggtcagctggctgacattgctctcaggcggctgctggacagcgaaggc
ctggagctggaccgagttctgcagcagcccgcacgcatcaccaagagaatccttgaggaa
caggcgctgagggagtacgtcctcgctctgtttcgtctccctcgcagcgagagactccac
gaggtggcgtcctgctccgtgtggacgccgcacgcacgctgccatacgagcgggactctg
tacaccaccgacagctacctgtgcttctccagccgggaggaaggcagctgcatcctgctc
ctccccctcaccgaggtgttgtccatcgagaaagcggagagcacctcgccgcttcccaac
cccgtcatcgtgagcgtccgcatgaagaaggcgttccagctgatcgagctgcaggacaga
gacgagttggtggacagtctcaactccagactcagagctctgcagtggaaagtgtccatg
ttccgcagcaggaaagacagcaagaggagcctgggctcgccgactccctactacaccttc
tactacgacactggcttttcagacgaggaggagatcgaggagcaggttctacgcaacacc
atcaacagcgaggcgctgatgacggccttccaccaaaacaaaccgggagccaacggcaac
aagagcatggagcaggtgaaggagcagctgtgggacaatcacttctcagagttcggacgc
ggcgtccacatgttccgcacggagaagatccagaggctcgtcgccatggggataccggag
tcgctgcgaggggagctgtggatgacactctctgacgcgtcctcagagctggagtctcat
cagggttactacaccaacctggtgcagaagtccatgggtcagagcaacctcgccacagac
gagatcgagcgggaccttcaccgctcgctgccggaccacccggccttccagaaccccacc
ggcatcgccgcgctccgacgcgtcctcaccgcctacgctcatcgcaacccgaagatcgga
tactgtcagtcgatgaacatcctggcgtcggttctgctactttacgccaaagaagaggaa
gcgttctggctgctggtggccgtctgtgagaggatgctgcccgactactttaaccgcagg
gtcataggagctcaggtggaccagtcggtcttcgaggagctgatccgcgagcgtctgccc
gagctggccgagcacgtgccggacctgtcgtccctgtcgtcggtctccctctcgtggttc
ctcacgctcttcctcagcgtgctgcccttccacagcgccgtgcgtgtcgtcgactgcttc
ttcttccacgggattaaggccgtcctgcagctgggattagccgtcctcgacgccaacgcc
gcgctgctctcggccagcaccgacgacggacaggccctgatgatcctcaccagtttcctg
gagcaggtggacagtgaagcgtcgcctcttcctccgtcctctccgcctgctgcagagcag
agcagccggggggacgacgacgtccccgccgcgggacacataaacatcaccgacctcatc
aacgagtcgtacgagaaattcggagacctgaccgtgcgtcagatcgagagacttcgctgt
cgacacagaatccgagtcctgcaggctcacgaggacacgaccaaagaaaacgctttaaga
ctggtgactccggacgtctccatctcttcagagaacttgtccgacatctacgacctcttt
aagacggagcacttcatcagtctgtactggggcgacagcagctcggcggcggcggcagag
gcggcggcgtggagctacatggactccggccgctcgtacctggagcgtcagtaccggctg
gaccggccccagttcaagagcctgtacgggctcctggtgccgtggcccggcgagtccaac
cagcacacggacacggtggccaaccgcaccttcacgctgctggaccaggaccgggacaac
ctggtcaccttcagggagtttgcaggctggctggacacgttgtactgtgaggagctgaac
gagaagatacggctgctgtatcgcctccacatcccaccagctctgactgagagcgaggac
gacccgtccctgatgaagaatcccctgttgtccactaacagaccgctctacgtcaataaa
ccctctgatgttgaaggtgaagtgaaaagagaagatttccaggagcagctgaagcagatg
ttgaaggatttggccaaagagaagcagaaggacgtggacaaacctctgccgctcatgaac
cagtgggagtttatccagttctgtaaaaccctctacagtttgttccacggcgactcggag
gagaacgagcttttccaggcgatcgcgaccgtcaccagcctcgtgctgcagatcggcgag
gccagtcaccgcggagacgcctcagagtcgccagtgaagaagacacaggtgacggcaggt
gatgatgtcactgcaggagggggaggcggaggcggagacaggaacacgacagcggagaag
gagtggacggtgagcttggctcagatcgtggcgtcgctgttgaccgaacagtcgctggtg
aacttcctggagaagtcggtggatctgagcgagaagatcgcggaggccaaagagaagcag
tatcaccagcgcgcaggtttgctcacgctgcagcaaaaacatcgcagctga
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integrated database retrieval system
