Solea senegalensis (Senegalese sole): 122764036
Help
Entry
122764036 CDS
T07721
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122764036 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssen04812
]
122764036 (clasp1a)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
122764036 (clasp1a)
Cytoskeleton proteins [BR:
ssen04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
122764036 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_EZ
Sec7-like_HUS
HEAT_2
Adaptin_N
Cnd1
Paxt-1_C
ParcG
TAN
MMS19_C
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
122764036
NCBI-ProteinID:
XP_043874358
LinkDB
All DBs
Position
LG2:complement(25011072..25092148)
Genome browser
AA seq
1604 aa
AA seq
DB search
MMEPSMENCLAQVLQKDMGRRLQVGQEIIDYILDKEKSHDLEQDQTALDKMVDGIASSWV
NSSNFKVALLGLDLLSALVTRLQERFRAHIGTVLPSLIDRLGDSKDQVRDQDQTVLLKIM
EQAASPQYVWDRMLGGFKHKNNRTREGVCLCLIATLSTYGAQGLTLSKIVPHICNLLGDP
TSQVRDGAMSCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSKFDEVQRSGNMTSSAGSD
KNFEDEDSVDGGRSSSSSSSKAPPSGRRTVMSSVRRPSSATAAKASGKEAAAGAVDEEDF
MKAFEDVPSVQIYSNREFEDQLTKVREVLSDDKHDWEHRVTALKKVRSLMLARTTEYEGF
TQQLRLLEAPLKLSAKDLRSQVVREACITLGHLSSILGNKFDHGAESIMPTLLNLVPNSA
KVMATSGVATIRLILKHTHYPRLIPIITSNCTSKSVSVRRRCYEFLDLMLREWHTNTLER
HVAVLTETIRKGIHDADSEARSIARKCYWSFHGHYSREAEHLFQTLESTYQKALQSHLKS
SDSIVSLPQSDRSSSSSQESLNRPLSVKSVIGGSITRSKLVSTRVSTSSGSLQRSRSDID
VNAASSAKSRLSTVPASSSPFSSAAALPPGSYASLDGTPGKSDGRVRTRRQSSGSVGGAS
PSVVDSRGRSRAKVVSQSQRSRSANPISAGSRSSSPGKLLSHSSYGRIPRATVSASTTPA
DKRSRIPRSQGCSRETSPSRMGLASLCGKALLPAALPYRTLARSRIPRPSMSQGCSRDTS
RESSRDTSPARGFAPLASRRHSRSTSALSTAESHGQSDRYGLIHQARISASVNAMRILNT
GTEVEAAVADALLLGDSRNKRKPLRRRYESPGMYSDDDANSDASSACSERSYSSRNGGIP
HYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADP
HSKRVFSMFLETLVDFVTVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRE
SFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRII
TWTTEPKSSDVRKTLHSWVSEELAGRSSTAALLSTEGNQEERCKQAAQVVLISLFELNTP
EFTMLLGALPKTFQDGATKLLHNHLKNSSNTSSSVGSPSNTIGRTPQRHTPSRTSPLTSP
TNCSHGGLSPSMMEYDTENMNSEEIYSSLRGVTEAIQSFSYRSQEDLNEPIRREGKRDDA
AGREGVASSPGSDARLGLEMVEGGRTALDNKTSLLNTPSPRSFSGPRGREFALYGYGDTI
CTYDKSALKEAVFDDDVEQFRDCRRQESGENKMMLPKVLAPVGQDHSDLVADLLKELSNH
NERSEERKGALVELLKITREDSLAVWDEHFKTILLLLLETLSDKDYTIRALALRVLKEIL
RNQPARFKNYAELTIMKTLESHKDSHKEVVRAAEEAAATLAGSIHPEQCIKVLCPIVQTA
DYPINLAAIKMQTKVIERITKDSLVQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSV
IGEELKPHLVQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcccagcatggagaactgcctggctcaagtcctgcagaaggacatgggccga
cgactgcaggtgggacaggaaatcatcgattacattttggacaaggagaagtctcatgac
ttggagcaggatcaaacagcgctggacaagatggttgatggcattgccagctcctgggtc
aactccagcaactttaaggtggctctgcttggcttggacctcttatctgccttagtgaca
aggttacaggagcgattcagggcccacattgggacagttctgcccagccttattgatcga
ttgggagattccaaagaccaagtgagagaccaagaccaaacagtgttgttgaagatcatg
gagcaggccgccagcccacagtatgtatgggaccgaatgctgggaggcttcaaacataag
aacaacaggaccagagaaggagtgtgcctttgcctcatcgccacactgagcacatatgga
gcacaaggcctgaccctcagcaaaattgttccacacatatgtaacctcttgggggacccc
acaagtcaggtgcgtgatggagcaatgagttgcttggtggaaatctacagacatgtgggt
gagagggtgaggatggatctcagcaaaaaaggcctgccacagtcacggttgaatgtaatc
ttcagcaaatttgatgaagtccaaagatctggaaacatgacctcatctgctggctcagat
aagaactttgaggatgaagactctgtggatggaggcaggtcctcctcctcatcgtcctca
aaagcaccccccagtggcaggaggactgtaatgagctccgtcagaagaccaagctcagcc
acagcagctaaggcctcaggtaaagaggcagcagctggtgctgttgatgaagaggatttt
atgaaagcctttgaagatgtgccctctgtccagatctactctaacagagaatttgaggac
cagctgaccaaggtcagagaagtactgtctgatgacaaacatgactgggagcatcgagtg
acggctctaaagaaggtgcgttcactcatgttggcccggacgactgagtatgagggcttc
acacagcagctgcgtctcttagaggctcctcttaagctgtcggcaaaagacctgcgctct
caggtggtccgtgaggcctgcatcacactgggacatttatcatcaattctgggtaacaaa
tttgaccatggagcagagagcatcatgcccacactgctaaacctcgtgcccaatagtgcc
aaagtcatggccacatccggggtggccaccatccgcctcatcctaaagcacacacattac
ccacgtctcattcccatcataaccagtaattgcacctccaaatcagtctcagtaagacgg
cgctgttatgagttcttagacctcatgttacgagagtggcacactaatacactggaaaga
catgtggctgttctgactgagaccatcaggaaaggtatacatgacgctgactccgaagcc
agatctattgctagaaaatgctactggagtttccatggtcattacagccgcgaggcagag
catctgttccagacactagagtccacctatcagaaggccctccagtctcacctgaagagt
tcagacagcattgtgtctctaccccaatctgaccgctcctcctcgtcttcccaagagagt
cttaaccgaccattgtctgtgaagagtgtcattggaggaagcataacaagaagtaagctg
gtgagcaccagggtttcaacttcatcaggttccctgcagcgttctcgtagcgacatcgac
gtaaacgccgcctctagtgccaagtcacgtctgtccaccgtccccgcctcctcctcaccg
ttcagctctgcagctgccctccccccaggctcctacgcctcattagatggcactcctggt
aaaagtgatggtcgtgttcgcaccaggagacaaagctccggtagtgtgggtggagccagt
ccatctgtggtggacagcagggggcgcagtcgagccaaagtagtttcccagtcccagcga
tccagatcagccaatcccatcagtgctggcagtcgctccagctctcccggcaaactgctg
agccacagcagctatggtcgaatccctcgagccacggtgtcggcctccacaacgccagct
gacaagcgcagcaggattccccgcagccaaggctgcagccgagaaacaagccccagcaga
atgggtctcgccagcctgtgtggtaaagctcttcttcccgctgctcttccctaccgcacg
ctagcccggagccgcattccccgccccagcatgagtcagggttgcagtcgcgacaccagt
cgtgagagcagccgcgacaccagcccagctcggggctttgctcccctggcctcccgacgt
cactcccgttcaaccagtgctctctccacagccgaatcacatggccagtcagaccggtat
ggtttgattcatcaagcaagaatctcagcatcagtcaatgccatgaggatcttaaatact
ggtactgaggtggaggcagctgttgcagatgctctgctgttaggagactccaggaataag
cgaaagccgttgagacggaggtacgaatcaccagggatgtactccgatgatgatgccaac
agtgacgcgtcaagtgcttgttccgagcgctcgtacagttcacgaaacggaggcattcca
cattatctgcgccaaacggaagatgtggcagaggtcctcaaccactgcgccagctccaac
tggtctgagaggaaggagggcctgctgggtctgcagaacctcctcaagagccaaagaata
ctgagccgagtggagctgaagagactctgtgagatcttcaccagaatgtttgcagatcca
catagcaagagagtgttcagtatgttcctggagacacttgtggacttcgtcacagttcac
agggaggacttgcaggactggctgtttgtcctgctcactcagctgctgaagaaaatgggg
gcagatctgcttggctctgtccaggccaaagtccaaaaggctctggatatcacaagagag
tcatttccatttgaccaacagttcaacattctgatgaggttcattgtagatcagactcag
acaccaaacctcaaggtgaaggtggccattttgaagtacattgagtccctcgcacgccag
atggacccaacagacttcgtcaactccagtgagacacgtttggctgtgtcccgcatcatc
acctggaccactgaacccaaaagctctgatgtcaggaagacccttcatagctgggtgagc
gaggaactagctggcaggtccagtacagcagccttactgtccactgagggtaaccaggaa
gaaaggtgtaagcaggctgctcaggtggtgctgatatccttgtttgagctcaacacccca
gagtttaccatgctgctgggagcactgcctaaaaccttccaggatggagccaccaagctt
ttacacaaccatctgaagaactccagcaataccagcagtagtgtggggtctccaagcaac
accatcggacggacaccacagcgccacactcccagcagaaccagccccctaacctctcca
acaaactgctcccatggaggactttctccaagtatgatggagtatgatacggagaacatg
aactctgaagagatctacagctcgctccgtggtgtcactgaggccatccagagcttcagc
tatcgtagccaggaggacctgaatgaaccaatcagacgggagggcaagagggatgatgca
gctgggagagaaggagtggcatcatcccctggctctgatgctcgtttaggcttggaaatg
gtggaaggaggacgcactgccttggacaacaaaacgtctctactcaacacaccatcgcca
cgctctttctctgggccccgtggccgtgagtttgccctttatggctatggagataccatc
tgtacatatgacaagagcgcactgaaggaggctgtctttgacgatgatgtggagcagttt
cgcgactgccgacgtcaggaaagtggtgaaaacaagatgatgctccccaaggtcttagct
cctgttggtcaagaccattcagaccttgtcgccgacctgctgaaagagctgtcgaatcac
aatgaacgctctgaggagcgtaaaggtgccctagtggagctgctgaagattacacgggaa
gacagcctggctgtgtgggatgaacattttaaaactatcctcctgctcctgctggagacg
ctcagcgataaagactacaccatccgagccctggccttgcgtgtgctcaaagaaattcta
aggaaccagccggcccgcttcaaaaactatgctgagctgaccatcatgaagactctagag
tctcacaaagactctcacaaggaggtggtgagagcagctgaggaggccgcagccaccttg
gctggctccatccacccagagcagtgcatcaaagtgctgtgccctattgtgcagacagct
gactaccccatcaacctggctgccatcaagatgcaaaccaaggtcattgaacgcatcacc
aaggactcactagtgcagctgctgcctgatatcattcctggactcctacagggatatgac
aacacagagagcagcgttcgcaaggccagcgtgttctgtctggtggcgatctactctgtg
attggcgaggagctcaaaccccatctggttcaactcacgggcagcaagatgaaattatta
aacttgtacatcaaacgagcccagacgaccaacagcaatagcagcagttcttcagacgtc
tcctctcatagctaa
DBGET
integrated database retrieval system
