Solea senegalensis (Senegalese sole): 122764740
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Entry
122764740 CDS
T07721
Symbol
ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56 isoform X1
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssen03009
]
122764740 (ddx56)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122764740 (ddx56)
Ribosome biogenesis [BR:
ssen03009
]
Eukaryotic type
Pre-60S particles
Helicases
122764740 (ddx56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Phage_YunG-like
Motif
Other DBs
NCBI-GeneID:
122764740
NCBI-ProteinID:
XP_043874598
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MAAERLQFDEMGLDDRLLKAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAY
AVPVIQRILNSKQSVREQDVRALILVPTKELGRQVQTMMRQLTAYCSRDVRVTDISGKAD
LSAQRPILMEKPDVVVGTPSRVLAHLNAQNLVLHSSLETLVVDEADLLFSFGFEADLKNL
LCHLPKIYQSFLMSATFTEDVQALKELLLHNPVILKLQGSQLPDSSQLQQYSIKCEEEDK
FLLIYTLLKLRLVQGKTLVFVGTVERCYRLKLFLEQFAIPACVLNSELPLQSRCHIITQF
NQGFYNYIIATDEQSLADPTAAPQTTAGKGKKKKTTEKGGKSKDNEYGVSRGVDFQNVAS
VINFDFPTTVESYIHRVGRTARADNPGTALSFISHTELGLLSEVDEALTGDHADSVLKPY
EFKMEEIEGFRYRCRDAMRSVTKQAVREARLKEIKQELLNSEKLKTYFEDNPRDLQLLRH
DKDLHPAVVKPHLRNVPEYLIPESLRGVVNPLSSRRRRKRKETPKPEGVVKTSFKKNIKG
ANPLKSFRYSGGRGRKGNTSKS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgagaggctacagtttgatgaaatgggcttagacgaccgtcttttaaaggcg
gttgcagacctgggttggtcccagcccacactgatccaggagaaggccattcccttggcg
ctggaggggaaagaccttcttgccagagctcgaacaggatctggaaaaactgctgcttat
gctgtacctgtcattcaacgcatcctgaactccaaacagagtgtccgtgagcaggacgtc
agggctctgatcctggtcccaaccaaagagctgggtcgccaggtccagaccatgatgagg
cagctgacggcatactgctcaagggacgtgcgagtgactgacatttcaggaaaggccgat
ctgtcagcacagagacctatcttaatggagaagcctgatgtcgttgtgggaacaccatcg
cgtgtgttggctcacctcaacgcccagaacctggtcctgcattcatcgctggagacactg
gtggtggatgaggccgacctgcttttctcttttgggtttgaggcggacctgaagaacctg
ttgtgtcatctgcctaagatctaccagtcgttcctgatgtcggccactttcactgaagat
gttcaggctttgaaggagctgctgcttcacaacccagtgattctgaaactgcagggctct
cagcttccagacagcagccagctccagcagtacagcatcaagtgcgaggaggaggacaag
tttctgctcatctacacgctgctgaagctgcgactggtgcagggaaagacgctggttttt
gtggggaccgtggagagatgctacagactgaagctgttcctggaacagtttgccattcct
gcctgcgtgctcaactctgagctgcctcttcagtccaggtgtcacatcatcacccagttt
aaccagggattttacaactacatcattgccacagatgaacagagtctggctgatcccact
gcagcgccacagacgactgcaggcaaagggaagaagaagaagaccacagagaaaggagga
aagtctaaggacaacgagtatggagtctccagaggtgtagacttccaaaatgttgccagt
gtcatcaactttgatttccccaccactgtggagtcgtacattcacagagttggaagaacg
gcgagagcagacaacccaggcactgctctatcgttcatctcccacactgagctgggttta
ctgtctgaagtggacgaggctctcacaggagatcatgctgattctgtcctgaaaccttac
gagtttaaaatggaggagatcgaaggcttcaggtacaggtgcagggacgccatgcgttca
gtgacgaagcaggcggtgagggaggccaggctgaaggagattaaacaggagctgcttaat
tctgaaaaactcaagacatatttcgaggataaccccagagatctgcagctgctcagacac
gacaaagacctccatcctgctgtcgtcaaacctcacctgaggaacgtccccgagtacctc
attcctgagtcgctgaggggcgtggtcaatccactgtccagcaggaggaggaggaagagg
aaggaaacgccaaaacctgaaggagtcgttaagaccagttttaagaagaacatcaagggg
gcaaacccactgaagagcttcagatacagcggaggcagaggcaggaaaggcaacacgagc
aagtcatag
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integrated database retrieval system
