Solea senegalensis (Senegalese sole): 122764928
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Entry
122764928 CDS
T07721
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen02010
ABC transporters
ssen04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122764928
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122764928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssen02000
]
122764928
Transporters [BR:
ssen02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122764928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
122764928
NCBI-ProteinID:
XP_043874870
LinkDB
All DBs
Position
Unknown
AA seq
2293 aa
AA seq
DB search
MSVLTQLGLLLWKNFTYRRRQTLQLLVEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWLQGILCNANNPCFRNPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDQ
NLDGFKDLAQALRTLQDSRPGFKLKHFLRDDETLTSFLRTNASFPENIVQQIRDADIDLE
KVLLQGFGVHLRDMCPRKGGVSNLEDFVTVSDPQVLMLIQEVICQAPPIWLNHAEEHFLN
NLDFLKPIQRDMRSDPKAVRLVAKATNNLLENLGSLAVELASMKSWVDLRNEIVFLKNAT
ASPSVMYAAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNHNSSEDDAGTHYDNSSTP
YCNSLVRTMDSNPMSKMIWQALKPLLVGKILYTPHTPATQRVIHEVNRTFQELGVFRDLG
GMWEELRPKVWDFMENSPQMDLVRTLLKNNVTASFFHAQLSSTDWTVADVSNFLSKKTDD
SSPPGSVVTWREVFNETDEAIMSISRFMECVNLDKLEPVSSEEKMVNQSMILLEDRKFWA
GIVFPDVAPNDTELPQNLSYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYIWGGFT
YLQDVIEHGIIRAMTGTREKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAI
ILKCVVYEKEARLKETMRIMGLDNGILWFSWFISCLVPLLISAGLLVLLLKMGNLLPYSD
PGVVFLFLASYAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWEDYIGFG
TKVFASLLSPVAFGFGCEYFALFEEQGVGIQWKNLVLSPMEEDDFSLRTAIGMMYFDSFL
YGVLTWYLEAVFPGQYGIPRPWFFPFTKSYWFGKKDGSSSVPLNRKGNPGVVCMEEEPAH
LEPGVYIENLVKVYRQGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGQDIRTELDVIRQSLGVCPQHNVLFSMLTVEEHIWFYSRLKGLSEQQVKGEIEQ
ILQDTGLPHKRKSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVKKDP
EPSLSSCRNSASTVSLSKKEEECASVSSSDAGLGSENESEAATIDNGPVASICNVPFVLP
DVSLVSSLILGHVPAARLVEDLGHELTYVLPYHAAKDGAFVELFKDLDTKLTDLGISSYG
VADTTLEEIFLKVAEDNGVDTDVPSDGTLPVRRRRKTHAFGGGEPQSCLRPLMDDDQDEN
HESDTDPENKESDWLKCADGKGSYQVSGWSLRKQQFVALMWKRFLNARRSRKGFFAQIVL
PAVFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVSFISDDAPGDVTMQKLLNALLEPPG
FGTRCMDGHPIPDTPCTMADEDWHVPDVPASVQQLFSSSNWTMDDPSPACICSSDGKKKM
LPDCPPGAGGPPPPEMKLSSTDALQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRYG
GFSLGARSTQVLPPANEVDDAIERIRKIFELQKGAAADRFLDSLSGFINGLDTKNNVKVW
FNNKGWHSVPAFINVINNGILRANLPKGHDPDQYGIRAFNHPLNLTKEQLSQVALVTTSV
DVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMHFISGVQPLLYWVANFTWDMCNYIVP
ATLVILIFICFQQKAYVSSTNLPTLALLLLLYGWSITPLMYPASFFFTIPSTAYVVLTSV
NILIGINGSISTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADALE
RFGENRFRSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYKFFIKPSSVSKLTKLGPLGEE
DEDVARERQKIVHGLGHGDILELRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNGAG
KTTTFKMLTGDTVVTSGEAFLAGKSILREIDEVHQNMGYCPQFDAINELLTGREHLELYA
VLRGVPEHQVCHVAEWGIRKLGLIKYADKAAGSYSGGNMRKLSTAMSLIGAPPVVFLDEP
TTGMDPKARRALWNCILSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHL
KNRFGDGYTIILRVTGHDPDLVPVMKFIESELRGSTLKERHRNMLQYQLPSSLTSLAHIF
SVLADNKDTLHIEDYSVTQTTLDQVFVNFAKDQSDDYHSKDNAVRHKDVSVHVPALNTGA
AEGHDHTLTESVM
NT seq
6882 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcctcactcagctcggtttgttgctgtggaaaaacttcacctacagacgacga
cagacgctgcagctgctggtagagatcgtgtggccgctcttcatcttcttcatcctcatc
gctgtgagactcaactatccaccatatgaacaacatgagtgtcattttccgaacaaggcg
atgccgtcggcaggaacgctgccgtggcttcagggaattctctgcaacgccaacaatccg
tgtttcaggaatccgacgccgggcgaatccccgggcgtcgtcgggaacttcaacgactcc
ataatctctcgtcttttttctgacgccaaaaagattctgctctacagtcagaacgaccag
aacctggacgggttcaaagacctggctcaggcgctgaggacgctgcaggacagccgccca
ggctttaaactcaaacatttcctgagagacgacgagactctgacgagcttcctgcggaca
aacgcatcttttcccgaaaacatcgtccaacagatcagggacgctgacattgacctggag
aaggtcctcctccaagggtttggtgtccacctgagggacatgtgccccaggaaagggggc
gtgtccaatctggaggactttgtgacagtctcagatcctcaagtgttgatgctgatacag
gaagtcatctgtcaggctccgcccatctggctaaaccatgcagaggaacacttcctgaac
aacctggacttcctcaaacccatccagagggacatgaggtccgaccctaaggccgtcaga
ctggttgccaaggcgacaaacaacctgctggagaatctgggttcactggctgtcgagctg
gcgagtatgaagagttgggtggacctgaggaacgagattgtgttcctgaagaacgcgacg
gcgtccccgagcgtgatgtatgcggccgtgtccaggatcgtgtgcggtcaccctgagggc
ggcggcttgcagatcaagtccctcaactggtacgaggacagtaactacaaggctctgttc
ggaaaccacaacagcagcgaggacgacgcagggacgcactacgacaactcctccacgcca
tactgcaacagtctggtccggaccatggactcgaaccccatgtccaagatgatctggcag
gcgctgaagccgctgctcgtgggaaagatcctgtatacgccacacacacctgctacacag
agggtcatccatgaggtgaacaggaccttccaggagcttggtgtgttcagggacctggga
ggaatgtgggaggagctgagacccaaagtgtgggacttcatggagaacagtccgcagatg
gacctggtcaggacgctgctaaagaacaacgtcaccgccagcttcttccacgctcagctg
tccagcactgactggactgttgctgacgtgtccaacttcctgtcaaagaagacggacgac
tcctcaccaccaggcagcgtcgtcacctggagggaggtgttcaacgagacggacgaagcc
atcatgagcatctcccgcttcatggagtgtgtgaacctggacaaactggaaccggtctcc
agtgaggagaagatggtgaaccagtccatgattctactggaggacagaaagttctgggct
ggaatcgtgtttcctgatgttgcccccaacgacactgagctgccacaaaatctcagctac
aagatccgcatggacatcgacaacgtggagaggaccaacaagatcaaagacgcgtactgg
gacccgggtcctcgggccgacccgttcgaggacatgcgttatatctggggtgggttcacg
tacctgcaggacgtcatcgagcacggcatcatcagagccatgaccggcaccagagagaag
accggggtttacatccagcagatgccgtatccatgctacgtcgacgacatcttcctgcgt
gtgatgagccgctccatgccgctcttcatgactctggcgtggatgtactcagtggccatc
atcttgaagtgtgtggtttatgagaaggaggcgcggctgaaggagaccatgaggatcatg
ggtttggacaatgggatcctgtggttcagctggttcatcagctgcctggttcctctgctg
atcagtgctggactgttggtgctgctgctcaagatggggaacctgcttccctacagcgac
cctggcgtggtcttcctgttcctggcgtcctacgctgtggtgaccatcatgcagtgcttc
ctcatcagcacggcgtttgctcgagcgaacctggcagcggcgtgtggaggaatcatctac
ttcactctctacctgccgtacgtgctgtgcgtggcgtgggaggactacatcggctttggc
accaaagtctttgctagcctcctgtctccagtggctttcggcttcggctgtgagtacttt
gctctgtttgaggagcagggagtcgggatccagtggaagaacctggtgttgagtccgatg
gaggaggacgacttcagcctccgcaccgccatcggcatgatgtactttgactccttcctg
tatggtgtcctcacctggtacctggaggccgtgtttccaggtcagtatgggattcccagg
ccttggttcttccctttcaccaagtcctactggtttggaaaaaaggacgggtccagcagt
gttcctcttaaccggaaaggaaaccctggagtggtatgtatggaggaggagccagctcac
ctggagcccggcgtctacatcgagaacctggtgaaggtttatcggcaagggaagaagctg
gcagtggacggactgacacttggcttctatgaaggacagatcacgtccttcttgggacac
aatggagctggaaaaaccaccacaatgtccatcctcactggtctgttcccgcccacctct
ggcaccgcctacatcctgggccaagacatccggacggagctggatgtcatccgacagagt
ttgggtgtctgtccgcaacacaacgtcctctttagcatgctgaccgtggaggagcacatc
tggttctactcacggctcaaaggcctgtcagagcagcaggtaaagggtgagatcgagcag
atcctgcaagacactgggctgccacacaaacgcaagtccaggactagcactctgtccggg
ggaatgcagaggaaactgtccgtggctctggcttttgtcggagggtcaaaggttgtgatc
ttggatgaacccacggccggggtcgacccctatgcacgcagagggatctgggatcttttg
ctgaagtaccgacagggtcgcaccatcatcctgtcaacacaccacatggacgaggcggac
atcttgggtgacaggatcgcaatcatctctcacgggaagctgtgctgcgtcggttcatct
ctgtacctgaagaaccagctggggacgggttattacctgacactggtcaagaaagatcca
gaaccttcactaagctcctgcaggaactcagccagcaccgtgtccttgagcaagaaggag
gaagagtgtgcatcagtgagcagcagtgacgccggcctcggcagcgaaaatgaaagtgag
gcagcaacaattgataacgggcccgtggcgtccatctgtaacgtcccctttgtgctgccg
gatgtgtctctggtgtcgagtctgatcctgggtcacgtaccggctgctcgcctggtggag
gacctgggtcatgagctgacctacgtgctgccgtatcacgccgccaaagacggcgccttc
gtggagctgttcaaagacctggacacgaagctcaccgacctcggtatctccagctacggt
gtggcggacacgacactggaggagattttcctgaaggtggcagaagataacggcgttgac
actgacgtcccctcagacgggacacttcctgttcggcgccgaaggaagactcatgcgttt
ggaggaggtgaacctcaaagctgcttaagaccattaatggatgacgaccaagacgagaac
cacgagtctgacactgaccctgagaacaaagaatctgattggctgaagtgtgctgatggt
aaaggttcatatcaggtgagtgggtggagcctgaggaagcagcagtttgtggctctgatg
tggaaacgcttcttgaatgctcgacgctccaggaagggcttcttcgctcagattgtcctt
cctgccgtgtttgtctgcatcgcgctcgtcttcagtctcattgtccctccgtttggaaag
tatccgagtctggagctgcagccgtggatgtacgaggaccaggtctccttcatcagtgac
gatgcccccggagacgtcaccatgcagaagttactgaacgctctgcttgagccgccgggc
tttgggacacgctgcatggacggacatccaatcccagacacaccctgtacaatggctgat
gaggactggcacgtccccgatgtccctgctagtgtccagcagctgttcagctccagcaac
tggactatggatgacccttctccagcctgcatctgcagctctgacggaaagaagaagatg
ctgccagactgtccccctggtgctggaggaccacccccacctgagatgaagctgagctcc
acagacgctctgcagaacctgacgggacgaaacatctctgactacctggtgaagacctac
gcgcagatcattggcaagagcttgaagaacaaagtttgggtgaatgagttcagatacgga
ggcttctcattgggggccaggagcactcaggtcctcccaccggccaacgaggtggacgac
gctattgaacgaatcagaaagatctttgagttacagaagggggcagcagcagatcggttt
ctggacagtctgtctgggttcatcaatggtttggacacaaagaacaatgttaaggtgtgg
ttcaataataaaggttggcacagcgtcccagcgttcattaatgtcatcaacaacggaatc
ctgcgtgctaacctgcccaaaggtcacgaccccgaccagtacggcatcagagcctttaac
cacccgctgaatctgaccaaagagcagctgtcgcaggtggcgctggtgacgacctctgtg
gacgtgctggtgtccatctgtgtgatctttgccatgtccttcgtcccagcgagcttcgtg
gtcttcctcatccaggaacgcgtctctaaagccaaacacatgcatttcatcagtggcgtc
cagccgctgctctactgggtcgctaactttacctgggacatgtgcaactacatcgtcccg
gcaacgctggtcattctcatcttcatctgtttccaacaaaaagcctacgtgtcgtcaacg
aacctgcccacactcgcactgctgctgctgctctacggctggtccatcacgccgctcatg
taccccgcctccttcttcttcaccatccccagcacggcctacgtggtcctcaccagcgtc
aacatcctcatcggcatcaacggcagcatctccacctttgtcatggagctgtttggaaac
aacgagatcggaggaatcaacgacattctgaagaacgttctgctcattttcccgcacttc
tgtctggggcggggcttgatcgatatggtgaagaaccaggcgatggccgacgcccttgag
agatttggcgaaaaccggttccgctctcctctcgagtgggacatggtcggtaagaactta
ttcgccatggcggtggagggcgtggttttcttcatcatcaccgtcctcatccagtacaag
ttcttcatcaagcccagctccgtcagtaaactcactaaacttggtccactcggtgaggag
gatgaggacgtggcgcgtgagagacagaagattgtccatggtcttggacatggagacatc
ctggagctgcggcagcttactaaggtgtttaagaggaagcagaaaccggccgtcgatcga
ctgtgcgtcgggattccgcctggagagtgtttcggcctccttggtgtgaacggagcagga
aaaactacaacctttaagatgctgaccggagacacagtggtgaccagtggagaagccttc
ctggctgggaagagtatcctgagggaaatagatgaggtccatcagaacatgggttactgt
cctcagtttgacgccatcaacgagctgctaacaggaagagaacatctggagctgtacgcc
gtactcagaggtgtccctgaacaccaagtctgccatgtggcagagtgggggatcaggaag
ttgggtctgatcaaatacgctgacaaagcagcaggaagttacagcggaggaaacatgagg
aaactgtccactgccatgtctctgatcggcgctccgcccgttgtcttcctggacgagccc
acaaccggcatggaccctaaagctcgccgcgctctctggaactgcatcctcagtgtcatc
aaggagggacgctctgtggtcctcacctcacacagtatggaggagtgtgaggctctgtgc
accaggatggccatcatggtcaacggcaggttcagatgtttgggcagcgtccaacacctg
aagaacaggtttggtgatggttacaccatcatcctgcgggtcacaggtcacgaccctgac
ctggttcctgtgatgaagttcatcgagagcgagctgcgcggcagcacgttgaaggagcgt
catcgtaacatgcttcagtatcagctgccgtcctcgctcacctcgctcgctcacatcttc
tccgtcctcgccgacaacaaggacacgctacacatcgaggactactccgtcacgcagacc
acgctcgaccaggtgtttgtgaattttgcgaaggaccagagcgacgactatcactccaaa
gacaatgctgtgagacacaaagacgtgtccgtccacgtccccgcgctcaacactggcgcc
gcagagggccacgaccacacgctgacagagagcgtcatgtga
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integrated database retrieval system
