Solea senegalensis (Senegalese sole): 122765020
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Entry
122765020 CDS
T07721
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122765020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122765020
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122765020
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122765020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_4
PRY
zf-RING_2
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
122765020
NCBI-ProteinID:
XP_043874974
LinkDB
All DBs
Position
LG2:complement(15452823..15466387)
Genome browser
AA seq
684 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSINAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRRERAAPDRKAMTSSSDRVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPLQDSHLRGLMCLEH
ENEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYDKLKKSSGRFLCVGSDHSHQET
DQQALDSNLSNLIKRTSELESLMGKLIQTCQHVEVNASRQENKLLEECELLINIIQQRRQ
IIGTKIKEGKSVRMRKLAQQIASCKQCIERSSSLITQADQTLKETDHTRFLQTAKNICER
VSMATASSQILLPEINLNDTFDSFVLDFTREKKMLESLDYLTGEWPIIRTQHYDTITVHW
TSDDEFSVISYELQYAIFTNQSNVVSLCSSVDSWMIVPNIKQNHYTVHGLQCGTKYIFIV
KAINQAGNRSSEPGKLKTNSQPFKLDPKSAHRKLRVSHDNLTVEKDETLSKKSHSQDRFS
SHSSYGVTGNVYIDSGRHYWEALIGGSTWFAVGIAYKSAPKHEWIGKNSASWVLSRCNAS
WVVRHNSKEMPIEPSPNLRRLGVLLDYDSGSLSFYDAVGSQHLYTFDIAFTQPVCPVFNV
WNRCITILTGLPIPDHLEGTYFNH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaactgacctgcccaatctgtctggagctctttgaggacccg
ctgctcttgccttgtgctcacagcctttgtttcaactgtgcccaccgcatcctggtctcc
cactgcacccccagcgagccaattcagtccatcaacgcctttcagtgcccaacctgtcgc
tatgtcatcaccctgaaccagaggggcctggagggactgaaacgcaacgttacattgcag
aacatcatcgaccgttaccagaaagcttctctgagtggacccaactctcctaacgagacc
cgacgcgagcgagccgcccctgaccgcaaagccatgacttcttccagtgaccgcgtccag
tgccagttctgtgagcaggaccctccacaggacgctgtgaagacttgcgtgacctgtgaa
gtgtcgtactgcgatgagtgtcttaaggccacccaccccaacaagaagcccttcacgggc
caccgtctaattgagcccttgcaggactcccacctgcgggggcttatgtgtctggagcac
gaaaatgagaaggtcaatatgtactgtgtgacagatgaacagttgatctgtgcattgtgt
aagctggtgggccgacaccgagaccaccaagtagcagccctcagtgaccgatatgacaaa
ctcaagaaatcttctggccgctttctctgtgtggggagtgatcattcacaccaggagaca
gaccagcaagccttggattccaacctcagcaatctaatcaagaggaccagtgagttggaa
agtctgatgggcaaacttatccaaacctgccaacatgtggaggttaatgcatcgcgacaa
gaaaacaagctgctggaggagtgtgagctgctgattaatatcatacagcagcgaagacaa
atcataggcactaagataaaggaggggaagtctgtgcgaatgaggaaactggcccagcag
atagccagctgtaaacagtgcatcgagaggtcctcctccctcatcacacaggccgaccaa
accctcaaggagacggaccacactcgcttccttcagacggctaaaaatatctgtgagaga
gtatcaatggcgacggcgtcgtctcaaatcctgctaccagaaatcaatctcaacgacaca
tttgatagttttgttttggacttcacaagggagaagaaaatgctcgaaagcttagattat
ctcacaggtgagtggcctataatccgaacacagcattatgacacgatcacagttcactgg
acatcggatgatgagttctctgtcatatcgtatgaacttcagtacgccatcttcaccaac
caatctaatgttgtcagtttatgcagctctgttgatagctggatgattgtaccaaacatc
aagcaaaatcactacactgtacacggactccagtgtggcacaaaatacatctttattgtg
aaggccataaaccaggctggaaaccgcagcagtgaaccagggaagctcaagacaaacagt
cagccattcaagctggatccaaagtctgctcatcgtaagttgagagtgtcccacgacaac
ttgactgttgagaaggacgagacattgtccaagaagagccacagccaggaccgcttctcc
agccacagcagctatggcgtcacagggaatgtctacatcgacagtggccgtcattactgg
gaggcgctgataggcggaagcacatggtttgcagtgggcatcgcatacaagtctgcacca
aaacatgagtggattggcaaaaactccgcctcctgggtactgtctcgctgcaacgcctca
tgggtggtacgtcacaacagcaaggagatgcccattgagccctcacccaacctgcggcgt
cttggagttttgctggactatgactccggatctctgtccttctacgatgctgtcggttct
cagcacctgtacacatttgacattgccttcactcagccagtttgccctgtgtttaatgtg
tggaataggtgtataacaatcctcacaggactgcccatcccagatcacttagaagggaca
tatttcaaccactga
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