Solea senegalensis (Senegalese sole): 122765035
Help
Entry
122765035 CDS
T07721
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122765035
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122765035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
122765035
NCBI-ProteinID:
XP_043875005
LinkDB
All DBs
Position
LG2:complement(35000011..35019364)
Genome browser
AA seq
949 aa
AA seq
DB search
MGQKDHEEAGAGRILDLELDLEYLHVAGADRQAGSADGPPAMEEQGENSPLPAVAEETAA
VSDAICDPSSSSSSAHTVDGGEGLSTHSKITHQPLCRTQCVDLGTEGPPEPPEPPAELSS
EPERDSSSQSPPTSPRKHPPSRPPTPAKAEAGGKGYQAKLEFALKLGYSEDTVRLVLSKL
GPDTLINDILGELVKLGTKTDGEQPPVSLASTSSSSSSSSSSCACSDVLDAQRSDSPCLS
DSLCDQDNLRPVVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHHDITVFVPAWRKEQ
SRPDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNY
RDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPVMPEQKKQPC
PYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVTTKNQGDAGLVKSHSVPAGSI
DAKKGSASKRQSDPSIRALSYSDAEEKLLLAKGRMESQKSSSSSSSSSSSCMSPAPGGPP
SGLSLPHEQQSRAATPHGLLPASSHDLYPHCESPDLSYYSVTRAYSGLSLSSRRSPDCRF
PGDADLRLGSLGSAGSECGSESSTSCGSSCDSYSERPCPGCPPDALLEDSVHFSAPHGRL
YPHHAPSNHDLCALQPPDYPNVPHSHASNPGVHSYHMSVTCGQSCGHEQPPPPDAPPKRP
LYPLPPHLQHQPLAARSSCPGDYHSLSQSSPHPPGSPLGRCLAPTRAESVSDSRLYEHHA
TSHHHHRPKALPSWDSYYRQPPLPPSRYEYQSLPDTRQSSWHAPPWTEEGYAQRHHSSHP
ALHPSPTHYLNHPPPPAHSPHPSSSPLPPYPPHSGHLAVPSHAPPSYMLQHSESPAHGRY
GDVREKAYINLCNIFPSELVSRVMARSPHITDPQQLAAAILAEKAQSGY
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagaaggaccatgaggaggcaggagcaggacgcatcctcgacctggagctggat
ctggagtatctccacgtagctggggctgaccggcaggctggcagtgctgacggaccccct
gctatggaggagcagggggaaaactcccctctccctgctgtggcggaggaaaccgccgcc
gtctctgatgccatttgtgatccgtcgtcgtcttccagctccgcccacactgtggacgga
ggagagggattgtccactcacagcaagatcacgcaccagccgctctgtcgaacccagtgt
gtagacttgggcaccgagggacctcctgaacctcctgagcctcctgctgaactctcgtca
gagcctgagcgagactcatcttctcagtctccgcccacttcaccacgcaagcacccgccc
agtcgtccgcccactccggctaaggcagaagcgggagggaaggggtaccaggcgaagctg
gagtttgccctgaaactgggctactccgaggacacggtgcggctggtgctgtccaagctg
ggtccagacacgctcatcaacgacatcctgggagagctggtcaagctgggcaccaagacg
gacggcgagcagccgcccgtgtcgctggcgtccacctcgtcctcgtcctcctcctcgtcc
tcgtcgtgcgcctgctccgatgtgctggacgctcagaggtcggactcgccgtgtctgtcg
gactctctgtgtgaccaggacaacctgcggccagtcgtggtggacggcagtaacgtagcc
atgagtcatggcaacaaggaagtgttttcatgccagggcatccagctggctgtggactgg
ttcttagagcgcggtcatcatgacatcacagtgtttgtgcctgcgtggaggaaggagcag
tcccgccctgatgctccgataacggatcaggaaatcctgcgtcgcctggagaaggagaag
atcctggtgttcacgccgtcgcgccgcgtccaaggccgtcgcgtggtctgctacgacgac
cgcttcatcgtcaagctggcgtacgagtcagacggcatcatcgtgtccaacgacaactac
agggacctggccaacgagaagcccgagtggaagaagttcatcgacgagcggctgctcatg
tactcgtttgtcaacgacaaattcatgcctcctgatgaccctcttggtcgccacggcccc
agtttagacaatttcctgagaaaaagacccgtcatgcccgagcagaagaagcagccttgt
ccatacggaaaaaagtgcacttacggccacaagtgtaagtattaccacccagagagaggc
gctcagcctcagcgcgccgtggcggacgagctgcgagccagcgccaaaacctgcgtcacc
acaaagaaccagggagacgctgggctggtgaagagccacagcgtgcccgcaggaagcatt
gacgccaaaaaaggcagcgcctcgaagaggcagtcggaccccagtatccgcgctctgtcg
tacagcgacgcggaggagaagctgctgctggctaaagggaggatggaaagccaaaagagc
agcagcagcagcagcagttctagtagcagttgcatgtctccagccccaggaggccctccg
tctggcctcagcctgccccacgagcagcagtccagagctgccactcctcacggtctcctc
cctgcctccagtcatgacctttaccctcactgtgagtctccagacttgagctactactcg
gtaacgcgtgcctactccggcctgagcctctcctccagacggagtcctgactgtcgcttc
cccggcgacgcagacctgcggttgggctcgctgggctcagcaggctccgagtgtggcagc
gaaagcagcacgagctgcgggagcagctgtgactcgtacagcgagaggccgtgtcccggg
tgtcctcctgacgctttactggaagacagcgtccacttctccgctcctcatggtcgactg
tatccccatcacgctccgtcaaaccacgacctgtgtgctctgcagcctcccgattatcca
aatgtcccgcacagccacgcgtcaaaccccggcgtgcacagctaccacatgagtgtgacc
tgtgggcagagctgtggtcacgagcagcctcctccgcctgacgctccaccaaagcgcccc
ctctacccgctaccgcctcatctccagcatcagccgctggccgctcgctccagctgcccg
ggcgactaccactccctctcccagagcagccctcaccctcccggctctcccctgggccgc
tgcctggcccccacgcgagccgagagtgtgtcggactcacgtctgtacgaacaccacgcc
acgtcgcaccatcaccaccggcctaaagctctgcccagctgggactcgtactatcgacag
ccaccgctgccgccgtccaggtacgagtaccaaagtctgccagacacgcgtcagtcgtcc
tggcacgcccccccctggacagaggagggctacgcccagcggcaccactcctctcaccct
gctctccacccgtccccgacacattacctgaaccacccaccgcctcctgctcactctcct
catccctccagctcccctctccctccttacccgcctcacagcggccacctcgccgtcccc
tcccacgctcctccctcctacatgctgcagcactcagagtcgcccgcgcacggccgctac
ggcgacgtgagggagaaagcgtacatcaacctgtgcaacatctttccctcggagctggtg
agtcgagtgatggccagaagtccccacatcactgacccccagcagctggcggccgccatc
ctggcagagaaagctcagtcaggatactga
DBGET
integrated database retrieval system
