Solea senegalensis (Senegalese sole): 122765051
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Entry
122765051 CDS
T07721
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122765051 (sox1a)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122765051 (sox1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
ZrgA
Motif
Other DBs
NCBI-GeneID:
122765051
NCBI-ProteinID:
XP_043875049
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All DBs
Position
LG2:complement(20587117..20679930)
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AA seq
297 aa
AA seq
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MYSMMMETDLHSPGPQTNTNTGQPGSNGGSKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLASGLLSGPSGGGGVGLGVGMSSSGVGQRLESPGGHGGSASSGYAHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGAHHHHHHAHHHHAHNPQPMHRYDMTALQYSPISNS
QSYMNASPSGYGGISYTQHQGSGVSSSAAAMGTLGSLVKSEPSEVFSGGHGSLWEGL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagactgacctgcattcccccggcccccaaaccaacacgaac
acggggcaaccggggtcgaacggcgggtccaaagcgaatcaggaccgggtgaagagaccg
atgaacgctttcatggtgtggtcccgtgggcagcggagaaagatggcacaggaaaacccc
aagatgcacaactccgaaatcagcaagcggctgggcgccgagtggaagttaatgtccgag
gctgagaagcgccctttcatcgacgaggcgaagcgtttgcgagccatgcacatgaaggag
catccggattacaagtaccggcccagacggaagaccaagacgctgctgaaaaaggacaaa
tattccctcgccagtgggctgctttctgggcccagtgggggcggtggagttggtttaggg
gtcggtatgagttcatcgggggtcggacagaggttagagagccccgggggtcacggaggc
tccgccagctccggctacgcgcacatgaacggctgggcgaacggtgcgtactcggggcag
gtggctgcagccgcggcggctgcggcgatgatgcaggaggctcagctcgcctacagccag
cacccgggcagcggagcgcatcaccaccaccaccacgctcaccaccaccacgcgcacaac
ccgcagcccatgcaccgctacgacatgacagcgctgcagtacagccccatctcgaactct
cagagctacatgaacgcttccccctccggctacggcgggatcagctacacgcagcaccag
ggctccggagtctcctcctccgctgctgccatgggcacgttagggtcgctggtgaagtcg
gagccgagtgaagtattcagcggtggacatggatcactgtgggagggactgtga
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