Solea senegalensis (Senegalese sole): 122765085
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Entry
122765085 CDS
T07721
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
122765085 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122765085 (xrcc5)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
122765085 (xrcc5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
DUF4599
Motif
Other DBs
NCBI-GeneID:
122765085
NCBI-ProteinID:
XP_043875091
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Position
LG2:13917607..13928193
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AA seq
738 aa
AA seq
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MRRTFPVHLVRALSKRSALVLCMDVGFSMSNSAPGEESPFELAKKVIQKFVQRQVFAETK
EELALVLFGTDSTKNPLSKDGQYQNITIHRHLMLADFDLLEEIENQIHPESQQADWLDAL
VVCMDLLKTETQGKKYERLNIVLLTDLNSQSSADHLDIITENLKQAGITLQFFLPFPVKD
DEQDGGDGDNGGPSHPGTGKGLSQQQKESLDMMKHIMLCLDEEDGLDEIYTYRNALEHLH
MFKRIERRPMAWPCQLTIGSSLAIRIVGYKAVTEEHLKKTWITVDAQTNQKEDVKRETVY
CLDDDNETEVQKDDIIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFAKQEMVQRHR
LVGHQVVKMFAPKDDEHAGVALSAVIQALDELQMVAIVRYAYDRRCNPQVGAAFPCIKQN
YECLIYIQLPFTEDLRQFTFPSLENNKKFTPSDTQLSAVDSLIDSMMLVEEDENGEINDL
FKVHHIPNPYFQRHYQCLHHRAVNPGTPLPPMEPWLKAALEPPEVITTRRQAPLEEIKRK
FPLTEVEKKKKPKTSAQIFGKDSEEPDSKKAKVDEEEEEEEFNLANIAEGSVTSVGSVDP
PRDFCTLIKLKRLPFGEVCQQLTHRIEQLLSNKNTQYYMKSITCIQAFREQSVKLGNADL
YNSYLQSLKRSIPSRGLEVFWDLLVQDTISLISKDEVEGSTVSKNEANQFLVAEEKKEET
AAPPAEDAGDVDDLLDMM
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcggacgtttcctgtccatcttgttcgggccttgtccaagaggtcagcgctggtg
ctgtgcatggatgtgggcttctccatgtccaactctgcaccgggtgaggagtcgcccttt
gaactcgcgaaaaaagtcatccagaagtttgtccaacgtcaggtttttgctgagacgaag
gaagaactggctcttgttctgtttggcacggattccactaaaaaccctctgtccaaggac
ggccagtaccagaacatcaccatccatcgccacctcatgttggctgattttgatttgttg
gaggaaatagaaaatcaaattcatccagagagtcaacaggcagattggctggatgctctt
gtcgtctgcatggatctccttaaaacagaaacacaggggaagaaatacgaacgtctcaac
atcgtcctcctgactgacctcaacagccagtccagtgcagaccacctggatattattact
gaaaacctgaaacaagctggcatcactttacagttctttttgcctttccctgtaaaagat
gatgagcaggatggaggggatggagataacggaggccctagtcacccaggcacagggaaa
ggtctgtcacagcaacagaaggagagcctggatatgatgaaacacatcatgttatgtctg
gatgaggaggacggactggatgaaatttatacatacaggaacgcacttgaacacctgcac
atgttcaagcgtatcgagaggagacccatggcctggccctgccagcttacaattggcagc
tctcttgcaatccgtattgttggatacaaagcagtgaccgaagagcacctgaagaagacg
tggatcacagttgatgctcaaaccaaccagaaagaagacgtgaagagggagactgtgtat
tgtctggacgatgacaatgagaccgaggtgcaaaaggatgacatcattcaaggttttcgt
tatggaagtgacattgttcccttctccaaagtggatcaagagcagatgaagtataaacac
gatgggaagtgcttcgctgttctgggttttgccaaacaagaaatggtacaacgtcatagg
ctggttggacatcaggtcgtcaagatgtttgctcccaaggatgatgagcatgctggagtg
gcactgtcggccgtcattcaagcactggacgaactccaaatggtggccatcgtgcgttat
gcctatgaccggcgctgcaaccctcaagtaggagcagcttttccttgtatcaagcagaac
tacgagtgtctgatttacatccaactgcccttcacagaagacctcaggcaatttaccttt
ccttctcttgagaacaacaaaaagttcactccatcagacactcagctgtctgctgtggac
tctctcattgactccatgatgttagtggaggaagatgaaaatggagaaattaacgacctg
tttaaggtccaccacattcccaacccttacttccagaggcactaccagtgtctgcatcat
cgggcagtgaaccccggcaccccacttccccccatggagccgtggctgaaggcagctctc
gagccacctgaggtcattactacacgtcgccaagctccactagaggagataaagaggaag
tttcctcttacagaagtggagaaaaaaaagaagccaaagacgagtgctcagatttttggc
aaagactctgaggagccggatagtaagaaggcaaaagtagatgaagaagaagaagaagag
gagtttaatctggccaacattgctgaaggctctgtgacttcggtgggaagcgtcgatcca
ccccgagacttctgcactctcatcaagctgaagagacttccatttggagaagtctgtcag
caactgactcacaggatagagcagttgcttagcaacaagaacacacagtactacatgaag
agcatcacctgtatccaggcttttagagagcagtcggttaagctagggaatgctgacctg
tacaacagctacctccagtccttgaaaaggagcatcccaagcagagggttagaggtcttc
tgggacctgcttgttcaagatactatcagtctgatcagcaaggacgaggtcgaggggagc
actgtgtccaaaaacgaggctaatcagtttctggttgctgaggagaagaaagaggagact
gctgcacctccagctgaagatgcaggagatgttgatgacttgctggacatgatgtaa
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