Solea senegalensis (Senegalese sole): 122765182
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Entry
122765182 CDS
T07721
Symbol
nup62l
Name
(RefSeq) nucleoporin 62 like
KO
K14306
nuclear pore complex protein Nup62
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122765182 (nup62l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122765182 (nup62l)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122765182 (nup62l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
QRICH1
Parb-CE
DUF4164
Motif
Other DBs
NCBI-GeneID:
122765182
NCBI-ProteinID:
XP_043875246
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All DBs
Position
LG2:complement(15706979..15709446)
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AA seq
619 aa
AA seq
DB search
MSGGFGFGQPSAPFTFGDQKTTAAAAAPAPGTGFGLTSSAPTATGGGFTFGTQPTQANAN
TAGGFSFGTPAKSTPAGGGFSFGTPANTTFGLGTPAQTTAGAAGAGLTMGSTAAPAAGSG
FALGAGLSSQTTAAAPAGGGFSFGNATQPPPQLQPQLQSQLQPQLQSQLQPRPIPAAIPA
QSQLQSQLQSQLQPQLQPQLQPQLQPQPQLAVTTAPAATAASGGLNFGGFSFGNTKVQMT
TAAASTAPSGGGFSFGTTAPSTLTLGTQPQPVSTAAATTATQGGGFAFGIKPSSTPAPPA
STQPAPAPAPSLGPSLFAAPFTTATAAATGTGFTLGSVATSAASAAPATTTAAGGGQAFM
LKPLGASTTSISAPVPVPTASTVAATIGAATGAATGFTLGIKSASGLSTTTATATTITTA
APPVMTYAQLEGLINKWSLELEDQERHFLQQATQVNAWDRMLVENGEKITSLHKEMEKVK
LDQRRLNQELDFILSQQKELEDLLCPLEESVKEQSGTIYMQNADEERERTYKLAENVDAQ
LKRMSQDLKEIIEHLNTSSGSGDTSDPLQQICKILNAHMDSLQWIDQNSVLLQRRVEDVS
KLCDNQRKEQEKTFRLTFD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgggtttggcttcgggcagccttctgctccttttaccttcggagatcagaag
accacagccgccgcagccgcacccgcccctggtaccggctttgggctgacaagctccgca
cctacagctaccggtggtggcttcaccttcggcacccagcccacccaggccaacgctaac
accgccggcggtttcagtttcggcacaccagccaagagcactcctgctggtggaggattt
tcttttggcacccccgccaacactacatttggtctcggcacgcctgctcaaactacagca
ggagctgctggagcggggttgactatgggttccacggcagctccagcggcggggtcaggg
ttcgcactgggcgccggtctgtcctcacagaccaccgctgccgcccctgcaggtggcggc
ttcagctttgggaatgctactcagcctccaccccagctccaaccccagctccaatcccag
ctccaaccgcagctccaatcccagctccaaccgcgcccaatcccagctgcaatcccagcc
caatcccagctgcaatcccagctccagtcccagctccaaccacagctccaaccacagctc
caaccacagctccaacctcaaccccaacttgctgttacaacagcacctgcagcaacagca
gcgtcaggtggcctcaactttggagggttcagctttggaaatacaaaggtccagatgacc
acagctgctgcctctactgccccttcagggggaggcttcagctttggtaccactgctccc
tccaccctcacactgggcacccagcctcagccagtctcaaccgctgcagccacaacagcg
actcaaggtggaggatttgcctttgggattaaaccgtcatcaaccccagctcctcctgca
tcgacccaaccagctccagccccagctccatctctaggtccttctctctttgcagcacct
ttcaccacagctactgctgctgcaacaggcacaggcttcactttgggttcagtcgcaact
tcagcagcaagcgctgctcctgcaacaaccacagcagctggtggaggtcaggctttcatg
ctcaaacctttgggagcatctaccacctccatctctgctcctgttcctgttcctactgcc
tcaactgtggctgccacaataggtgctgcaacaggtgctgcaacaggcttcacactgggg
atcaaatctgcatctgggttaagcaccacaactgccacagccacaacaatcacaactgca
gctcctccagtgatgacctatgcccagctagagggtcttattaacaaatggagtcttgag
ctggaagaccaagagaggcatttcttacagcaggcaactcaggtgaatgcctgggaccgc
atgttggtggagaatggagagaagatcacatccctgcataaagagatggagaaggtaaag
ctagaccagaggaggctcaaccaggaactggatttcatcctgtcccaacagaaggagctg
gaggacttactttgcccgcttgaggaatctgtgaaagagcagagtggaaccatctacatg
cagaatgccgatgaagagcgtgaaagaacgtacaagcttgcagagaatgttgacgcacag
ctgaagaggatgtcccaggacctgaaggagattatcgagcacctcaacacgtccagtggc
tcaggagacaccagtgatccactgcagcagatttgtaaaattctcaatgcccacatggat
tctctacagtggatcgaccagaattcagtgctactgcagagacgagtggaggatgtgtcc
aaactgtgcgacaaccagcgcaaggagcaggagaagacctttcgtttgacatttgactga
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