Solea senegalensis (Senegalese sole): 122765569
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Entry
122765569 CDS
T07721
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122765569 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122765569 (pou2f1b)
03021 Transcription machinery [BR:
ssen03021
]
122765569 (pou2f1b)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
122765569 (pou2f1b)
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
122765569 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
122765569
NCBI-ProteinID:
XP_043875834
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All DBs
Position
LG2:4497463..4514543
Genome browser
AA seq
686 aa
AA seq
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MADGGAASQDESSGADAKVNNHSETTKCAMESGDGNTGIQINGLDLQRQTATTTSAITNA
HAQALLQQSKSEDSSALPTSVQQSVLPQTQLMLAGGQIAGLTLTPVHQQLLFQQAQAQLL
AGLAVQQSASQQNSNTGANISATAATPITQLSLTQPIQITQLQQQNMPQFVLLQPGHPIA
TPHQFIISQTPAQQALQLPHNQGNLLQNQPSITLAPQPATPSRTPATTPNHSLPQSQTPP
KRLDTPTLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEA
LNLSFKNMCKLKPLLEKWLNDAVCAENLTSDQALSSPSALGSPGMGIEGINRRRKKRTSI
ETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGNS
GGCSTPIKTIFTPSSPLVASPASLVSSSTINTPTTLTVNSVMPLTSTSVSSLPFPGSVGL
TNTTSVISNAPMVTTAISSPLTTIQSTNTESKAGMHALPVTSIATTLGTGQVMVASPGLS
AALQGAQLPTSASFAAMAAAAGLNPGLMASSQFPPGGALLSLAPGGLGSALSPAFLSNST
LATIQALASNGTIPITSLDASNLLFANASGNASNMVTFLNPQNLSLLNNPVSLVSTGAGL
QVDAHHQSSVAVPVTASTISTASKAQ
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggagcagatgctaaagtgaat
aatcattcagaaactactaaatgtgcaatggaaagcggtgatggaaacaccggaatccaa
atcaatggattggaccttcagaggcagacggcgacaaccaccagtgcaatcacaaatgca
catgcacaagccctcctccaacagtcaaagtcggaagactcgagtgctcttccgacctcc
gtccagcagagtgtattgcctcaaacccagctaatgttggctgggggacagattgcagga
ttgaccctgaccccagtacaccagcagctgttgttccagcaggcccaagctcagctcctg
gctgggctggccgtgcaacaatcagccagccagcagaacagcaacaccggggccaacatc
tcagccactgcagccacgcccattacccagctgtcccttacacagcccatccagatcacc
caactacagcagcagaatatgcctcagtttgttctgcttcagcccggccacccgatcgcc
acaccccatcagttcatcatctcacagacaccggcccaacaggcccttcaactacctcac
aaccaaggtaacctcctgcagaatcaaccaagcatcacccttgcacctcagcctgcaact
ccaagccgcacaccagcaaccacacctaatcactccctgccccagagtcagacaccaccc
aaacggttggacacccccactctggaggagcccagtgatctggaggagctggagcagttc
gccaagaccttcaaacagagacgcattaaactgggcttcacgcagggtgatgttggcctg
gcaatggggaagctgtacggaaacgacttcagtcaaacgaccatctctcgcttcgaggcc
ttgaaccttagctttaagaacatgtgcaaactgaagccactgctggagaagtggctcaat
gatgcagtttgtgcagagaacctgacatctgaccaggccctgtccagccccagtgccctg
ggctcaccaggcatgggcatagaggggattaaccgcagacggaagaagaggaccagtatc
gagaccaacatccgagtggccttagaaaagagctttctggagcagaaccaaaaacctacc
tctgaagagatcaccatgatcgccgaccagctcaacatggagaaggaggttattagggtc
tggttctgcaatcgccggcagaaagagaagaggatcaacccccccagtagtggaaacagt
ggaggctgcagcacccccatcaaaaccatcttcacccccagcagcccactggtggccagc
ccagcaagccttgtgagcagttcaaccattaacacgcccaccacgctgactgtaaactca
gtgatgcctctcaccagcaccagtgtctcaagtttgcctttcccaggctcagttggactc
acaaacaccacgtccgtcatctccaacgcacccatggtcaccacagccatcagctcgccg
ctgacgactattcagtccacgaacacggagagcaaggccggcatgcatgcgctacccgtc
acatccatagccaccactttagggacgggtcaggtgatggtggcgtctccggggctgtcg
gcggcactgcagggtgcccagttacccaccagtgctagttttgctgctatggctgctgct
gcaggactcaacccaggactcatggcttcctcacagttccctccagggggggccctgctc
agtctggcccctggtggcctcggcagtgcgctgagtcctgcattcttaagtaacagcacc
ctggccaccattcaagcgctggcgtcgaacggcacaatccccatcacctctctggacgcc
agtaacctgctgttcgccaacgcctccggcaacgcgtccaacatggtgaccttcctgaac
ccgcagaacctgtcgctgctcaacaaccctgtcagcctggtgtccaccggggcgggcctg
caggtcgatgcccatcaccagtcctcggtggccgtgcccgtgacagcctccaccatttcc
actgcctccaaggcccagtga
DBGET
integrated database retrieval system
