Solea senegalensis (Senegalese sole): 122765731
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Entry
122765731 CDS
T07721
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122765731 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122765731 (taf6l)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122765731 (taf6l)
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122765731 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
122765731 (taf6l)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122765731 (taf6l)
STAGA complex
122765731 (taf6l)
TFTC complex
122765731 (taf6l)
SAGA complex
122765731 (taf6l)
SLIK complex
122765731 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
122765731
NCBI-ProteinID:
XP_043876051
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All DBs
Position
LG3:complement(5473618..5480552)
Genome browser
AA seq
642 aa
AA seq
DB search
MADREERRFAEISRESVKFMAESSGVELGDDVAALLAEDVCYRLREATQSSSQFMRHAKR
RKLTVEDFNRALHWSNVEAVCGYGAQDALPFRSVKEGELFFVEDRDVNLVELALATNIPK
GCAETMVRVNVSYLDGKGNLEPQGTVPTAVQSLSDDLLKYYQQITRAILGEDPHLMKVAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSLSQPAEGASSAHPGSVVGAMGYRVSSPGLSPPPEPLSEATLGIA
SHLQAGGAGCPWEEWTPVPLPAMYKELYSFFGDSLAVRFSTGPGLGGYSPCTPSQLSHSR
KEPPGSSSNSDTTRKMPQLTANLNISPRHDGSPRTDPAPPSLAVTGSARSLTRSSTSSSV
QRSRSSSSRAGQRSAGLSRDVFPKPRFTAPQTGPTAFTFLIGGRQMGRRCQGRRPFQTTF
APTPPLPAIPPRAYAHKLPVIGRVGKPVRRWACSHYSLHLPL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgtgaagagcgccgttttgccgagatttccagagagtctgttaaattcatg
gcagagagttcaggcgtggagctgggtgacgatgtggccgctctactcgccgaggacgtg
tgctatcgcctgagggaggcgacacagagcagttcacagttcatgagacatgccaagagg
aggaagctgacagtggaggacttcaacagagccctgcactggagcaacgtggaggccgtt
tgtggctacggagcccaggacgctctgcctttccgttcagtgaaagaaggagaacttttc
tttgtcgaggatcgcgacgtcaacctagtagagttggcgcttgctactaacattcccaaa
ggctgcgctgagaccatggtacgagtgaatgtgtcgtacctggatgggaagggcaacctg
gagcctcagggaactgttcccactgcggtgcagtctctgtcagacgacctcttaaagtac
taccagcagatcacacgcgccatcctgggtgaagatcctcacctcatgaaggtggctctg
ctggaccttcagtccaactccaagatcgccgccttactgccgtactttgtttatgtcatc
agtggggtgaagtcagtgagtcatgacttggagcagctgaaccggctcctccacatggtg
aagagcctggtgcagaacccctacctgtacctgggctcgtacgtccgcagcctggtgtcc
agcgtcatgtactgcatcctggagccgctcgccgcgtccatcaacccgctcaacgaccac
tggaccctcagagactacgccgcgctgctcctcagccacatcttctggactcacggtgac
ctggtgagcggactctaccatcagatcctgctgtcgctgcagaaggttctgtctgatcca
gtgagaccactctgctcccactatggagccgtggtggggcttcatgctttgggatggaaa
gctgtagagagagttctcttcccacaccttcctgcctactgggcgaacctccaggccgtg
ctggacgattattctgtctccaacgctcaggtcaaagctgacggacacaaggtctacgga
gccattctggtggcagtggagcgcctgctgaagatgaaggcgttgtccctgtcccagcct
gcagagggcgcctccagcgctcacccaggctctgtggtgggtgctatgggttacagagtg
agttctcctggactcagcccccctccagagcctctgtcggaggccacgctcggaatcgcc
agccacctgcaggcgggcggggcgggctgtccctgggaggagtggacgcccgtccccctc
cccgccatgtacaaggagctctactcgttctttggagacagcctggccgtccggttcagc
acaggaccggggctcggcggctactccccctgcacgccgtcccagctcagtcactccagg
aaggagccccccggctcgtcttccaactctgacaccacccgaaagatgcctcagctgacg
gccaacctcaacatcagccccaggcatgatgggagtccacgcactgatccggcgccgccc
agtctggcggttactggatcagcgaggtcgctgactcgctcctccacctcctcctcggtc
cagcgctccagatcctcctcgtcccgtgccggccagcgctcggcaggtctgtcccgcgac
gtcttccccaaacctcgcttcaccgctcctcagaccggaccgacggcgttcaccttcctc
atcggcggtcgccaaatgggccgccgttgccaaggccgacgcccattccagaccaccttt
gccccgactccgcccttaccggccatcccaccccgtgcctacgcccacaaactgcctgtg
atcggcagggtgggcaaacctgtacgccgctgggcgtgttctcattactctctacatctg
ccgctttag
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