Solea senegalensis (Senegalese sole): 122765801
Help
Entry
122765801 CDS
T07721
Symbol
pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122765801 (pdzrn4)
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122765801 (pdzrn4)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
122765801 (pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
122765801
NCBI-ProteinID:
XP_043876168
LinkDB
All DBs
Position
LG3:27634736..27670317
Genome browser
AA seq
861 aa
AA seq
DB search
MRKRCGGAKEEDPECVLPQGELSLSLSHTHTPTQTADSKHTLHWALSTVSLTTRMGCNLC
TLQKREEHYKLLYEIAQVNGRDFSKVDRDDAVVETIRRDPIVVQVIRRTPTRAAAAVAHN
HGGAPQDMGAVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCHSIHTMEHEFY
ECPEYLSNTPAEVERTEEFVYEEVELCRQNSLEKLGLTLCYRTDDEEDTSIYVSQVEPNS
IAARNGRIKEGDRILQINGCEVQDREKAVALLSSEEARSIILLVTRPEIQLEDEVWLDDE
QQELVLELEERRKKKKKKKEHSFDRGDEHQAEEDMTTDTATCSSNNQDSGFGRSTDSPEH
QPLLARLHRRSPARCLRDRWLAEHPHTRHPKAVPQDTLSTGQSHEGGVSIRNSGGGVLGL
ENCFQQLLELKCQIRNGGECGVYSIRHSIECSLTEQGEGDGDGVDSEEGGSGVEHELRML
NEELRSIELECQSIMQAHQLRQSHNLDSPGWSPKDGPKRHSRLADIYEHPERLDSDKIRE
KDSSSAYNTAESARSTPLGLERSPDHSLQRHIAITNQKNLRLASSTPSSPITIPKPHGTP
SCSRPEDPSPVISSSPDQSNPSRSESDPALPADDERCEKKGRTRDSRRRLPYGCSYQTTP
YQGQGGSRQLQSYMQLLQQHSSLEYSQSQLSLVSVCRDPVHRSGRPGEPRLEWKVKVRAD
GTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSEMKMGRYWSKEERKQHLARARE
QRKRREFMQKSRLDCLKEGPASGAEGRKEINILELSHKKMMKKRNKKILDNWMTIQELMS
HGARVPEGSKVHNAFLSVTTV
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagaggtgtgggggagccaaggaagaggaccccgagtgtgttttgccccagggg
gagctctctctctcactctcacacacacacacaccaacacaaactgcagacagcaaacac
acactccattgggcacttagcaccgtttccctgacaactagaatgggctgcaatttgtgc
accttgcagaaacgggaggaacactacaaactgctgtatgagatcgcacaggtgaacggg
cgtgacttctccaaggtcgaccgtgacgatgcggtggtggagactatcaggcgagacccc
atcgttgtccaggtcatccggcgaacccccaccagggctgcggccgctgtcgcccacaac
cacggtggcgcgccgcaggacatgggcgccgttgacgtctgcacgcaaacagacatcacc
tttgagcacatcatggcactggccaagcttcggcccgctactccgcctgtccccgacatc
tgtcccttccttttgtctgacagctgtcattccatccacaccatggagcacgaattttac
gaatgccctgaatatctgtcgaacaccccagcagaggtggagaggactgaggagttcgtg
tatgaggaggtggagctgtgtcggcagaacagcctggagaagctgggcctgacactgtgc
tacaggaccgatgatgaggaggacacgagcatctatgtcagccaggtggagccaaacagc
atagcagcgaggaatggacgcatcaaagagggagatcgtattttgcagataaatggctgc
gaggtacaagaccgagagaaagctgttgccctgttgtcaagtgaagaagcaaggagcatc
atactgctggtgacgagacctgaaatccagctggaggacgaggtctggctagatgacgag
cagcaggagctggtgctggagcttgaggaaaggaggaagaaaaagaagaagaagaaggaa
catagctttgacagaggagatgaacatcaggctgaagaggatatgacaacagacaccgct
acctgttcctccaacaatcaagacagtggctttggacgtagtacagacagtcccgagcac
cagcctctgctggccagacttcacaggagaagtccggcccgttgcctcagggaccgatgg
ctggcggagcatccgcacacacggcacccgaaagcggttccacaggacactctgtccaca
ggtcaaagccatgaggggggagttagtattcgcaacagtgggggtggggtcctcggctta
gagaattgcttccagcaactgctggagctcaagtgtcaaatccgaaatggaggcgagtgc
ggggtgtactccattcgacacagcatagagtgcagcctcaccgagcaaggtgaaggggat
ggcgatggtgtggatagtgaggaaggtggtagtggggtagaacatgagttgaggatgctt
aacgaggaactgcgaagtattgagctggagtgccagagcatcatgcaggcgcatcagctc
cgccagtcccacaacctggactcaccaggatggagccccaaagatggacccaagcggcac
agccggcttgccgacatttatgaacacccagagaggttggacagtgataagatcagagag
aaagacagctccagtgcctacaacacagcagagagtgcgcggtcgacaccgcttggtttg
gagagatctccggaccactctttacagagacacatcgctatcaccaaccagaaaaacctc
agactcgcatcttccacaccctccagccccatcactatccccaaaccccatggtacacct
agttgtagcagaccagaagatccaagccctgttatctccagcagcccagaccagagcaac
ccctctaggtctgagtcagaccctgccctgcctgcagatgatgaaaggtgtgagaagaaa
ggccggactagggattccaggagaaggcttccctatgggtgttcctatcaaacaacacct
tatcaaggccaaggtggatccaggcaactccagagctacatgcagctgctacagcagcac
tcatccctggagtattcccagagccagctgagtctggtcagcgtctgtcgagatcccgtg
caccggagcggccgacctggggaaccgcgtctcgagtggaaggtcaaagttcgcgcagac
ggcacgcgctacgtggcccgcaggcccgcccgcgaccgcatccttagggagcgtgcgctt
agaattcgggaggagaggagcggtggcatgaccacggacgacgatgccatgagtgagatg
aagatgggccgctactggagcaaagaggagcggaagcaacacttggcgcgggccagggag
caaaggaagaggagggagttcatgcagaagagtcgcctagactgcctgaaggaggggcca
gccagcggcgctgaaggcaggaaggagattaacatcttagagctcagtcacaagaagatg
atgaagaagcgaaacaaaaagatccttgacaactggatgaccatccaggagttgatgagc
catggagccagagtacctgaaggctccaaagtacacaatgcctttctgtctgtcacaacg
gtctaa
DBGET
integrated database retrieval system
