Solea senegalensis (Senegalese sole): 122765992
Help
Entry
122765992 CDS
T07721
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122765992 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122765992 (dhx15)
03009 Ribosome biogenesis [BR:
ssen03009
]
122765992 (dhx15)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122765992 (dhx15)
Spliceosome [BR:
ssen03041
]
Complex A
U2 snRNP components
U2 related factors
122765992 (dhx15)
Complex B
122765992 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
122765992 (dhx15)
Ribosome biogenesis [BR:
ssen03009
]
Eukaryotic type
90S particles
Helicases
122765992 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_25
nSTAND3
AAA_29
Motif
Other DBs
NCBI-GeneID:
122765992
NCBI-ProteinID:
XP_043876483
LinkDB
All DBs
Position
LG3:complement(15355645..15385229)
Genome browser
AA seq
738 aa
AA seq
DB search
MRRDYDRGRGRDEWSRDRDRDRDRDRDRDRDVKSSGLHNNPAAFSGGFLKQNPIQQQINP
FTNLPHTPRYHEILKKRLQLPVWEYRERFTDILMRHQSFVLVGETGSGKTTQIPQWCVDM
VRSVPGPKRAVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTVLKYMT
DGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDA
GKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEVDEGDCLLFLT
GQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPNKPNGAIGRKV
VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTR
PGKCFRLYTEKAYKTEMQDNTYPEILRSNLASVVLQLKKLGIDDLVHFDFMDPPAPETLM
RALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCEFNCSNEILSITAMLSVP
QCFVRPTEAKKAADESKMRFAHIDGDHMTLLNVYHAFKQNHESTQWCYENFVNYRSLMSA
DNVRQQLSRIMDRFSLPRRSTEFNSRDYYTNIRRALVTGFFMQIAHLERTGHYLTVKDNQ
VVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDVKPEWLVKIAPQYYEMGNFPQCEAK
RQLERIIAKHSSKEYTQY
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgtgactacgacagaggcagaggccgtgatgaatggtcgcgagacagggaccgt
gaccgggatcgagaccgtgacagagacagggatgtgaagtcgtctggcttgcacaacaac
ccggctgcgttcagtggaggcttccttaagcagaaccccatacaacagcaaatcaaccct
ttcaccaacctgccgcacacgccacgctaccatgagatcctcaagaagcggctgcagctg
cctgtgtgggagtacagagagcgcttcactgacatcctgatgaggcaccagtcttttgtg
cttgtgggagagacgggctctggaaagaccacacagatcccccagtggtgtgtggacatg
gtgcggtcagtgccaggaccaaagagagcagtggcttgcacccagccgaggagggtggcg
gccatgagcgtcgctcaaagggtggctgatgagatggatgtcatgctgggccaagaggtt
ggctattccatcaggtttgaggactgcagctctgccaagactgtactcaagtacatgaca
gatggaatgttgctccgggaagccatgaacgatcccctgctggagcgctacggtgtcatc
atcctggacgaggcccacgagcgcacacttgccacagacatcctcatgggcgtcctcaag
gaggtggttcgtcagagagccgatctcaaggttattgtcatgagtgccacactcgatgct
ggaaaattccaggtgtactttgacaactgcccactgctaaccattcctggacgcacccac
cccgtggagattttctacacaccagagccagagcgggactacctggaggcggccatccgg
actgtgatccagatccacatgtgtgaggtggatgaaggggactgtctgctcttcctcact
ggacaggaggaaattgacgaagcctgcaagcgaatcaagagagaggtggacgatttgggc
cctgaagttggtgatatcaaaatcatcccattgtactccacactgcctccacagcagcag
cagcggatctttgagccacccccacccaataaaccaaatggtgcaattggaaggaaggtc
gtcgtgtcaacaaacattgcagagacatcccttaccatcgatggcgtggtgtttgtaatt
gatcccggatttgccaagcaaaaggtgtataacccacgtattcgagtggagtcacttttg
gtgacggccatcagcaaggcctcagcgcagcagagggcaggccgtgctggaagaacacgc
ccaggaaagtgtttccgtctttacactgaaaaggcgtacaagacagaaatgcaggacaac
acatatccagaaatcctgaggtccaacctggcctctgtggtactgcagctgaagaagctg
ggtattgacgacctggtgcactttgatttcatggatccaccagccccagagaccctgatg
cgagccctggagttgctgaactacctggcagcgctcaatgatgatggtgacctgacagag
ctgggctccatgatggcagagttccccctggacccccagctggccaagatggtcatcgcc
agctgtgaattcaactgttccaacgagatcctctccatcactgccatgttgtcagtccca
cagtgcttcgtccgacccacggaggctaagaaggcggcagacgagtccaaaatgcgcttt
gcccacatcgacggagaccacatgacgctgctcaacgtctaccatgccttcaaacaaaac
catgagtccacccagtggtgctatgaaaactttgtcaactaccgctcgctgatgtcagca
gacaatgttcgccagcagttgtccaggatcatggaccgcttcagtctgccaaggcggagc
actgagttcaacagcagagactactacaccaacatccgccgagcactggtcactggtttc
ttcatgcagatcgctcacctggagcgcactggccactatctcacggtgaaggacaaccaa
gtcgttcagctgcacccctccactgtgctggaccacaagcccgagtgggtgctctacaac
gagtttgtgctcaccaccaagaattacatccgcacgtgcactgacgtcaaaccagagtgg
ttggtgaaaatcgccccgcagtactatgagatgggcaacttcccgcagtgtgaagcaaag
agacagttggagcgcatcattgcaaaacactcgtccaaggaatacacgcagtactaa
DBGET
integrated database retrieval system
