Solea senegalensis (Senegalese sole): 122766134
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Entry
122766134 CDS
T07721
Symbol
samm50l
Name
(RefSeq) sorting and assembly machinery component 50 homolog B
KO
K07277
outer membrane protein insertion porin family
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122766134 (samm50l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ssen03029
]
122766134 (samm50l)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssen02000
]
122766134 (samm50l)
Mitochondrial biogenesis [BR:
ssen03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
122766134 (samm50l)
Transporters [BR:
ssen02000
]
Other transporters
Pores ion channels [TC:
1
]
122766134 (samm50l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
DUF4277
Motif
Other DBs
NCBI-GeneID:
122766134
NCBI-ProteinID:
XP_043876715
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All DBs
Position
LG3:complement(18582934..18597202)
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AA seq
470 aa
AA seq
DB search
MGAVHAKSLDTLPMHGRDLGVNPEDLMETPEPEQEAKQEILENKDVVVQHVNIQGLGRTK
EDLLGYEISDVFLAKNLIDVMKKAHVARQKLLRLGIFKDVEVLIDTSEGTDALPNGLDVT
FEVTEVKRLTGSYNTMVGNNEGSMVLGLKLPNMFGRAEKLTFQFSYGTKETSYGLSFFKP
QPGNFERNLILNMYKVTGQFPWSSLKETDRGLSSELNFPLGVTHHTLKWEGVWRELGCLA
RSASFAVREESGHSLKSALSHTVSIDSRNSAIFPSRGALLRINQELAGYTGGDASFLKED
FELQLNRRLFWDSVLSASLWGGMLFPIGGQQSCIADRFYLGGPTSVRGFGMYSIGPQSEG
DYLGGDAYWAGGLHLYTPLPFRPGKGGFGDLFRTHFFLNAGNLCNLNYGDGPRAHLQKLA
ECIRWSYGAGIVLRLGNIARLELNYCVPMGVQSGDRICDGVQFGAGIRFL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgtccatgctaagagtctggatactctaccgatgcatggccgggacttgggc
gtcaaccctgaagacttgatggagactccagaaccagagcaggaggccaagcaggagatc
ctcgagaacaaagatgtggtggtccaacatgtcaacattcaaggtcttggaagaactaaa
gaggatctgctcggctatgagatctctgatgtcttcctcgccaaaaacctcattgacgtg
atgaaaaaagctcacgttgccagacagaaactgctgcgcctgggaatcttcaaagatgtg
gaggttctcattgatacatctgaaggtacggacgccctgcccaacggtctagatgtcact
tttgaggtgacggaggtgaagagactgacaggaagctacaacactatggttggcaacaat
gaaggaagtatggtgttgggtctcaaactacccaacatgttcggtcgtgctgagaaactc
accttccagttctcgtacgggaccaaggagacgtcctacggcctgtccttcttcaagccc
cagcctggaaactttgaacgcaacctcattctcaacatgtacaaagtcactggtcagttc
ccatggagctccttaaaagagactgacagaggcctgtcatcagaactcaattttcctctc
ggagtaacccaccacacgctgaaatgggagggtgtatggagggagctgggctgcctggca
cgcagcgcttcctttgccgtgcgggaggagagtggacactctctgaagtctgccctatcg
cacactgtttcaattgattcaaggaattcggccattttccccagcagaggtgccttactc
cggatcaaccaggagctggctggctacacaggaggagatgccagcttcttgaaagaggat
tttgagctgcagctcaacagacggctcttctgggactcggtcttatctgcttctctctgg
gggggcatgctgtttcccattggaggacaacagtcctgtatcgctgacagattctacctt
ggaggtcccaccagtgtacgaggttttgggatgtacagcattgggcctcaaagtgaaggt
gattacctgggtggagatgcgtactgggcaggtggcctgcatctctacacccctctgccc
ttcagaccaggcaagggtggattcggagacctgttcaggacccatttctttctcaatgct
ggcaacctctgtaaccttaactatggtgatggtcctcgggcacacctgcagaagctagct
gagtgtatccgctggtcatacggagcaggtatcgtgctgagactgggaaacatcgccaga
ctggagctcaactactgtgtgcccatgggagttcagagtggagacaggatatgtgacggt
gtccaattcggagcaggaatccgcttcctgtag
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