Solea senegalensis (Senegalese sole): 122766487
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Entry
122766487 CDS
T07721
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122766487 (gigyf1a)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122766487 (gigyf1a)
Surveillance factors
Other surveillance factors
122766487 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
122766487
NCBI-ProteinID:
XP_043877323
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All DBs
Position
LG3:8948287..8961233
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AA seq
1084 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPLQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGVGGGAAPAGVVRGR
GATRGGRGRGRGEGGFYQRSIEDVEVGFGRSAREIHRSQSWDDRGERRFEKPLRREVGRP
GFEDAVGPAGPGRKEYTRADSDNWRTLREEHEEEEGEPGTNWRLTGPRRDDGGPRSAGWR
DHTGPGESRRRKFDFDFRDSEGHGGSRRRAGSDGLEDGDGLPEWCTDEEDGEMGTFDSSG
AFMPMKKGGKETILEDELEFKGIEEEEDDEGFPDIERNSAEGDKESKEVASAVVDSEAKP
ASPSSSPPTHCTPPSVEPQPSNPGPVVDNSSLNNSHPVKANTMPGEDMAPVGGSKTQLNP
GATTSASLPPPPPSSAAPLLPSSGGDNEDDEGMKHLQQEAEKMVASLQDTSLEEECFTQA
LQQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTMTLLVKRG
CDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRPPPPTQRPQPNRGPSGTVSQSSANKEGG
EGRMQTKRQGNLDQERLKKQQELAAAALYQQLQQQQLFQLINRCSEQGMMPSMNRSMSVP
DTGSMWDMHTSASQPSGGEASLWDITMNPSTQGPTLEQLQKLQQERRDAELRAKREEEEQ
RKRREEKRRQQEEQKRREEEELFRRKQCRQQELIMKLLQQAPQQQAPGAGSSGWSGGPSS
GLSKTGKSPVVALMEMQQEAERLLKQQHQQRAQQQRERHTGMSMGSSSMGGQWVDGVGMW
GGPGGMEGKSGSGSSSGSMGMWDEAVKNQAGLRGNSNNNMGLKNSRSSPSLSDQYMMRRK
RTEEEEKLLKLLQGMKPQDGFTTWCEQMLHALNTSANNSTSSLDVATIVAYLKEVESPYA
VLDFIRSYLGDTVEAKEFAKQFLERRAKQKANQQRQQQQLSKEVAGLNMNFPLQDSMRGM
NPSTLQSMFQANHIGKAGLYDNQGGKMKKKPPMMLHSDPSILGYSFHNTGDCPGLNEMEM
VEDY
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactcttaacttcggcccagaatggctccgtgcactgtccagtgggggg
agtgtgacgtccccccctccttcccctgccatgccaaagtacaagctggccgagtaccgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctatcctgcaggatgagcccttgcagccactggcactggtt
cctctaactgaggaggagcagagaaacttctccatgtctgtgaacagtgtggcggtgctg
aggctcatgggaaaaggggtcggtggtggggctgccccggccggagtggtccggggacga
ggggccacacgaggcggtcgaggacgaggtcgtggtgaaggtggattctaccaaagaagt
attgaagatgtggaggttggtttcggccgcagcgccagagagattcaccgcagccaaagc
tgggatgaccggggtgagcgtcgatttgagaagccgctgcggcgggaggtgggacgtcct
ggctttgaagatgctgtaggtcccgcgggtccagggaggaaggagtacacaagggctgac
agcgataactggcgtacccttcgggaggagcatgaggaggaggaaggggagccaggcacc
aactggagactcactggacctcgcagagatgatggcggtcctcgctcagcaggctggcgg
gaccacactggtccaggcgagagtcgtcggaggaagtttgactttgacttccgggactca
gagggtcatggtggcagtcgccggcgtgcaggcagcgatggactggaggacggcgacggc
ctgcctgagtggtgcacagatgaggaggatggggaaatgggcacattcgactcctcagga
gcttttatgccgatgaagaaggggggcaaggagacaatcctggaggatgagttggagttt
aaggggatagaggaggaggaagatgacgagggcttccctgatatagagaggaacagtgcc
gaaggagacaaagagagtaaagaagttgcctctgctgtagttgatagtgaggcaaagcca
gcatcaccttcttcttctcctccaacacactgtacccctccatctgtggagcctcaaccc
agcaatccaggcccggtggtagataattcttctctgaacaacagccaccctgtcaaggcc
aacactatgcctggtgaagacatggctccagtagggggctccaagactcagctgaaccct
ggtgccaccacctctgccagtctgcctcccccacccccatcctctgctgctcctctcctc
ccttcgtctggaggagacaatgaggatgatgagggcatgaagcacctgcagcaggaggca
gagaagatggtggcatcactgcaggacacctctttggaggaggagtgtttcacccaggct
ctgcagcagcagcaggaaagcaggaacacagctgcagctctcccactgtcacacgaggca
gccatgaagtggttctacaaggacccacaaggggaaattcagggtccattcaccacggtg
gaaatgtgtgagtggttccaggctggctacttcaccatgactctgctggtgaagcggggc
tgtgatgagggctttcagccactgggggacgtcatcaagatgtggggccgcgttcccttt
gccccagggccctccccgccgcccctgctggtgagaccgccaccaccaacgcagcgcccg
cagcccaaccgggggccctccgggactgtgagtcagagctcagccaacaaagagggtggg
gaggggaggatgcagactaaacgacagggaaacctggaccaggagcgcctgaaaaagcaa
caggagctggcagcagcagctctttatcaacagctccagcagcagcagctattccagctc
attaacaggtgcagtgagcagggtatgatgccttcgatgaacaggtcgatgtcagtgcca
gatacagggtccatgtgggacatgcatacctcagcttcacagccgtcaggtggtgaagcc
agtctttgggacataacaatgaatccttctactcagggtccaactctcgaacagcttcaa
aagctccagcaggagaggcgagacgctgaactcagggcgaagcgtgaggaggaggagcag
cgaaagaggagggaggagaagaggaggcaacaggaggagcagaagaggagggaggaggag
gagctatttagacgcaagcagtgtcgtcagcaggaattgatcatgaagttgctgcagcag
gctccccagcagcaggctccaggggcaggtagctcaggctggagtgggggtccttcctct
gggctctccaaaacagggaagtcccctgttgtggctcttatggaaatgcagcaggaggca
gagagacttctgaagcagcaacatcagcagagagcccagcaacagagagaacgccacacg
ggcatgtcaatggggagttcctccatgggtgggcagtgggtggatggtgttggcatgtgg
ggtggacctggaggtatggaaggtaaaagtggcagtggaagctcttcaggcagcatgggc
atgtgggatgaggctgtgaagaaccaagccggcctgcgtggcaacagcaacaacaacatg
ggcttgaagaacagtcgcagcagcccatcactcagtgatcagtacatgatgcgtcgtaag
cggacagaggaggaggagaagctgctgaagctgctgcagggcatgaagccccaggacggc
ttcaccacctggtgtgaacagatgctgcacgctctcaacacctctgccaacaactccacc
tcctctctggatgttgccacaattgtggcgtacctgaaggaggtggagtctccctatgca
gtgctggacttcatccggtcctacctaggggacacagtggaagccaaagagttcgccaaa
cagtttctagagcgacgtgccaaacagaaagccaaccaacagagacagcagcagcagtta
tcaaaggaagtggctggcctaaacatgaacttccctctacaggactcaatgcgaggtatg
aacccaagcaccctgcagtccatgtttcaagccaaccacatcggcaaggctggtctctat
gacaaccaggggggaaagatgaaaaagaaaccgcccatgatgctgcactctgaccccagc
atcttaggttactcattccacaacacgggcgattgtccgggcctgaatgagatggagatg
gtggaggattactga
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