Solea senegalensis (Senegalese sole): 122766587
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Entry
122766587 CDS
T07721
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04510
Focal adhesion
ssen04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122766587 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122766587 (lamb1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
F5_F8_type_C
LAMB1
DUF3887
DUF3570
Motif
Other DBs
NCBI-GeneID:
122766587
NCBI-ProteinID:
XP_043877508
LinkDB
All DBs
Position
LG3:2239081..2263066
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AA seq
1778 aa
AA seq
DB search
MMVLVIAAALAACSVVTAQVPEFADVCTEGSCYPATGDLLIGRAHKLSASSTCGLREPER
FCIVGHLEEDTQAKCFVCDSRDVYDEDNNPVSHTIENVVTTFAHNRLKTWWQSENGVENV
TIQLDLEAEFHFTHLIMTFKTFRPAAMVIERSMDFGKTWQVYRYFAYDCESSFRGVTPGP
MAKVDDIICDTRYSDIEPSTEGEVIFRVLDPVFEIDDPYSLRIQNMLKITNLRVKFLKLH
TLGDNLLDSRDEVKDKYYYALFDMVVRGNCFCYGHASECAPIDGAPTGAEGMVHGRCVCN
HNTEGLNCERCQDFYNDLPWRPAEGRSSHACKKCECNHHSASCHFDMAVYKTTGNVSGGV
CDDCQHNTVGRQCEQCAPFYYQHPERDLRDPNVCEPCNCDPAGSLQGGLCDPRTDVALGL
ISGQCRCKAHVEGERCDHCRRGHYGLGEGPDGCLSCTCNPLGTLPGGNSCDSNSGRCFCK
RLVEGHNCDECLPQHWGLSNVMDGCRPCDCDQGGAVNNNCDPLSGQCVCRDHMFGRRCDQ
VESGFYFIALDHYTYEAEDAEHGPGVTVVQRAFPLDRSPTWTGMGFVNVPEGAYLEFFIN
NIPDSMDYDILIRYEPQLPEQWEEVNIRVLRPVYIPPNYSGHCSNSIQSGDDQFISLSPG
SRHVLLPRSVCFEKGLNYTVRLSLPTYSTDSDVQSPYTLIDSLVLIPYVREMDMFGIDGD
AAWETFQRYRCLENSQSVIKSPMTDICNDYIFSVSALLHDGAIACQCDPQGSLSTVCEAS
GGQCHCRPNVAGRNCDHCSPATYNFGPAGCRPCECDRQGSVSTLCHEATGQCACVPGAMG
RQCSHCLPGFWGFPHCRPCHCNGHSEYCHPQTGECQGCRDFTTGQHCQRCLDGYHGDPEL
GSGSHCRPCMCPDGPGSGRQFADSCYLLSHTSQLVCVCSPGYKGVRCDECTPGYFGNPRV
PGGRCMPCQCHNNIDMQDPGSCDAQTGTCLKCLYHTDGYGCQHCKLGYYGNAATQSCRKC
MCYSEGTVPRACSSPDECQCDQHTGQCPCQPNVVGQNCDRCAADTWNISSATGCERCDCD
PVHSLSSSCNEVTGQCTCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGISGEQCHRV
TGHCTCREGVSGPRCDACARGYSGEFPGCEPCHRCFANWDVVVTELTNQTLRLEAKVSEL
QTSGVTAPYKELIGSLKKNTEAVREIVGSNPAAVKLEEIQERMNQIIGLMSYLNGKLNTT
EENLDLFNDEANSTDVNLDALSDEVQQLELGVQELRQQVYDAKNANLQGAMDTISDAHTL
SLTAELRANTSTSSPGNTVEQSAAVRKATEDKLSGSQKEFDRKHQRNSQKVKKLSEDLDA
FDLAPLSEKTCGGAGDGDNCSTCGGLGCVKEGGAPQCGGEDCKGLVTTSHTALKSAKDLD
KEIVEAMQEVDKLSRMVWDANVRANEAKANAMEVLVKSNKSKERVEQSNEQLRNLIKEIR
ELLTNEKADVSVIEMVANEVMALEMPTSTTKLQNLTKEIKEKVGTLTSVEEILSQSSDDI
EVAEALLKQAKAASEQATDMKETAEVVKAALDETERAQTIAMDAIQLAQNNTKGTLDLLI
SVESETALSELKLGNTTGRLVQLEREVGLLRQNHLEVNGLAETAEWITNQARLDAEEAQE
EFDGEVKDKYEEVEDLVEDKGEAVLQARRRADQLHLEAKELLTQSSGKLHRLTELESAYE
DNQRLLEAKAAELAELEQTVRRMLDEISHKVTLYSTCL
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcctggtgatagcagcagctctggctgcgtgcagtgtggtcactgctcaggtg
ccagagtttgcagatgtttgcacagagggcagctgttacccggccacaggtgacctgctg
atcggccgagctcacaaactcagcgcgtcgtccacctgcggcctccgggagcccgagcgc
ttctgcatcgtcggacacctggaggaggacacacaggcgaaatgtttcgtctgcgactcg
agggacgtgtacgacgaggacaacaacccggtgagccacaccatcgagaacgtggtcacc
accttcgcccacaaccgcctcaaaacctggtggcagtcggagaacggtgtggagaacgtc
accatccaactggacctggaggccgagttccatttcactcatctgatcatgacctttaag
acgtttcgtcccgctgccatggtgatcgagcgctccatggacttcgggaagacttggcag
gtttatcgctacttcgcgtacgactgcgagtcgtcgttccggggcgtgaccccgggcccg
atggccaaagtggacgacatcatctgcgacacacggtattctgacatcgagccgtccaca
gagggcgaggtgatttttcgggttctggacccggtctttgagatcgacgacccgtacagc
ctcaggatacagaacatgctgaagatcactaacctgcgggtgaagttcctcaagctccac
acgctgggcgacaacctgctggactcccgcgacgaggtgaaggacaagtactactacgcg
ctcttcgacatggtcgtccgcggaaactgcttctgctacggccacgcgtccgagtgcgcg
cccatcgacggagccccgacgggagccgagggcatggtgcacggccgctgcgtgtgcaac
cacaacactgagggactgaactgcgaacgctgccaggacttttacaacgatttaccgtgg
agaccggcagagggacgcagctctcacgcctgcaagaagtgcgagtgtaaccatcactcc
gcctcgtgccacttcgacatggccgtgtacaagacgacgggcaacgtgagtggcggcgtg
tgcgacgactgccagcacaacacggtgggccgacagtgcgagcagtgtgcgccgttctac
taccagcaccccgaaagagacctgagggaccccaacgtgtgtgaaccgtgtaactgtgac
ccagccgggtctctgcagggtggactgtgtgacccgagaaccgacgtggcactgggtctg
atctcaggtcagtgtcgctgtaaagcccacgtggagggcgagcgctgtgaccactgcaga
cgaggacactacgggctgggagagggacctgacggctgcctgtcttgtacgtgtaacccg
ctgggaactctgccgggaggaaactcctgcgactcaaactcaggaaggtgcttctgcaaa
cgcctcgtggaaggacacaactgcgacgagtgtctgccacagcattggggactgtccaat
gtcatggacggctgcagaccatgtgactgtgaccagggcggggctgtaaacaacaactgt
gaccctctctcgggacagtgcgtgtgcagggaccacatgttcggacgacgctgcgatcag
gtcgagtccggcttctacttcatcgcgctcgatcactacacgtacgaggccgaggacgcc
gagcacggacccggtgtgacggtggtgcagagggcttttccactggatcgcagtccaacc
tggaccggtatgggtttcgtgaacgtgccagaaggagcctacttagagttctttatcaac
aacatcccagactccatggactatgacatcctgatccgctatgaaccacagctgccagag
cagtgggaggaggtgaacatcagagtcctgcgtcccgtctacatcccgccgaactactcc
ggccactgcagcaactccatccagagcggagacgatcagttcatctcactctcaccaggg
tccaggcacgtgctgctgccgcggtcggtgtgttttgagaagggactgaactacacggtg
cgtctcagtctgccgacctactctacagacagcgacgtccagagcccgtacacactcatc
gactctttggtgctgattccatacgtcagggagatggacatgtttgggatcgacggtgac
gcagcgtgggaaacgttccagcgctaccgatgtctggagaacagccagagcgtcatcaag
agccccatgacggacatctgtaacgactacatcttcagcgtctccgcactgctgcacgac
ggagccatagcatgccagtgtgaccctcaaggttcactcagcactgtgtgcgaggccagt
ggaggtcagtgtcattgtcggcccaacgtcgctggcaggaactgtgaccactgttctccg
gcgacgtacaacttcggccccgccggctgcaggccttgcgagtgtgaccgccagggatcg
gtcagcaccctctgccacgaggcgaccggccagtgcgcgtgtgtccccggagccatgggt
cgccagtgttcccactgcctgccgggtttctggggcttccctcactgccgaccctgccac
tgtaacggtcacagcgagtactgccaccctcagaccggagagtgccagggctgcagggac
ttcaccaccggtcagcactgccagaggtgtttggatggttaccatggagacccagagctg
ggttcaggtagccactgtcgcccctgtatgtgccccgacgggccgggcagcggacggcag
tttgccgacagctgttaccttctgtcgcacacgagccagctggtgtgcgtgtgcagcccc
ggctacaaaggtgtcaggtgtgacgagtgcaccccgggttatttcgggaacccccgggtg
cccggcgggcgctgcatgccctgccagtgccacaacaacatcgacatgcaagacccgggg
tcctgcgacgcccagacgggcacctgtctcaaatgcctgtaccacactgatggctatggg
tgccagcactgcaaactgggttactacggcaacgctgctacgcagagctgcagaaagtgc
atgtgttactcagagggaaccgtacctcgggcctgttcctcgcctgacgagtgccagtgc
gatcagcacaccggtcagtgtccctgtcagcccaacgtggtcggtcagaactgtgaccgc
tgcgcagcagacacgtggaacatcagcagcgcgacgggctgcgagcgctgcgactgcgac
cccgtccactccctcagctcctcctgtaacgaggtcacaggacagtgcacgtgcaaacct
ggctttggtggcaggacgtgtcgcgagtgcagagaactgttctggggcaatccagaggtc
aaatgtcacgcgtgcgactgcgatccccgcggcatctccggcgaacagtgccaccgtgtg
accggccactgcacctgcagggagggcgtgtccggcccgcgctgcgacgcgtgcgcccgc
ggctacagcggcgagttccccggctgcgagccgtgccaccggtgcttcgccaactgggac
gtggtggtcaccgagctgaccaaccagactctgcgcttggaggccaaagtctcggagctc
cagaccagcggcgtgaccgcgccgtacaaggagttgatcggcagcctgaagaaaaacacc
gaggccgtgagggagatcgtggggagtaatcctgccgcggtgaagctggaggagatccag
gagcggatgaaccagatcattggtctgatgtcctacctcaacgggaagctgaacacgacc
gaggagaacctggacctgttcaacgacgaagccaactccaccgacgtgaacctggacgcg
ctctcggacgaggtccagcagctggagcttggcgtccaggagctgagacagcaggtgtac
gacgccaagaacgccaacctccagggtgccatggacaccatctcagacgcacacactctg
tctctgacggcggagctccgcgctaacacgtccaccagcagccccggtaacacagtggag
cagtccgccgcggtacggaaagccacagaggacaaactgagcggcagtcagaaggagttt
gaccgtaaacaccagaggaactcgcagaaggtgaagaaactgtccgaggacctggacgcg
ttcgacctggcgccgctcagtgagaagacgtgtggaggtgcaggtgacggcgacaactgc
tccacctgcggcgggctgggttgtgtcaaagagggtggagctcctcagtgcggaggagaa
gactgcaaaggcctcgtcacgacctcccacaccgctctgaaatcagccaaagatctggac
aaggagatcgtagaagcgatgcaggaggtggacaagctctccaggatggtgtgggacgcc
aacgtccgcgccaacgaggccaaggcgaacgcgatggaggtgctggtcaagtccaacaag
agcaaagagcgagtggagcagagcaacgagcagctgcgcaacctcatcaaagagatacga
gaacttctcaccaatgagaaggccgatgtctcggtgatcgagatggtggccaacgaggtc
atggccctggagatgccgacgtcgacgacgaagctgcagaacctgaccaaggagatcaag
gagaaggtggggacgctgaccagcgtggaggagatcctgagtcagagctccgacgacatt
gaggtggcggaggcgctgctgaagcaggccaaggctgccagtgaacaggccaccgacatg
aaggagacggcagaggtcgtgaaggcggcgctggacgagaccgagcgcgctcagaccatc
gccatggacgccatccagctggcccagaacaacaccaaaggaacactggacctcctgatc
tctgtggagtcggagacggctctgtcggagctgaagctcggaaacaccacaggtcgcctg
gttcagctggagagggaagtcggactcctgcgacagaaccacctggaggtgaacggactg
gcagagacggccgagtggatcacgaaccaggcccgactggacgcagaggaggctcaggag
gagtttgacggggaggtgaaggataaatacgaggaggtggaggacctggtggaggataaa
ggagaggcggtgctgcaggcgaggaggagagcagatcagctgcatctggaggccaaagag
ctgctcactcagagcagcggcaaactacacagactcacagagttggagagcgcctacgag
gataaccagcgcctcctggaggccaaagctgcggagctggccgagctggagcaaactgtc
cgccgaatgctggacgagatcagtcacaaagtgactctgtacagcacctgtctgtga
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integrated database retrieval system